RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SQS1	YNL224C	TLG2	Q08144	397 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	SLK19	Q08581	821 aa	Known RBP	3.58	□□□□□ -1.84
SQS1	YNL224C	RKM1	Q08961	583 aa	Predicted RBP	3.58	□□□□□ -1.84
SQS1	YNL224C	REX3	Q12090	404 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	RTC5	Q12108	567 aa	Known RBP	3.58	□□□□□ -1.84
SQS1	YNL224C	CIT1	P00890	479 aa		3.57	□□□□□ -1.84
SQS1	YNL224C	RPC40	P07703	335 aa	Known RBP	3.57	□□□□□ -1.84
SQS1	YNL224C	PBS2	P08018	668 aa		3.57	□□□□□ -1.84
SQS1	YNL224C	PGI1	P12709	554 aa	Known RBP	3.57	□□□□□ -1.84
SQS1	YNL224C	PMA2	P19657	947 aa		3.57	□□□□□ -1.84
SQS1	YNL224C	XRS2	P33301	854 aa		3.57	□□□□□ -1.84
SQS1	YNL224C	CNS1	P33313	385 aa		3.57	□□□□□ -1.84
SQS1	YNL224C	HCS1	P34243	683 aa		3.57	□□□□□ -1.84
SQS1	YNL224C	CCL1	P37366	393 aa		3.57	□□□□□ -1.84
SQS1	YNL224C	LRP1	P38801	184 aa	Known RBP	3.57	□□□□□ -1.84
SQS1	YNL224C	SLN1	P39928	1220 aa	Predicted RBP	3.57	□□□□□ -1.84
SQS1	YNL224C	YFR006W	P43590	535 aa		3.57	□□□□□ -1.84
SQS1	YNL224C	YJL007C	P47080	104 aa		3.57	□□□□□ -1.84
SQS1	YNL224C	SSN8	P47821	323 aa		3.57	□□□□□ -1.84
SQS1	YNL224C	MTO1	P53070	669 aa		3.57	□□□□□ -1.84
SQS1	YNL224C	YGR266W	P53326	701 aa		3.57	□□□□□ -1.84
SQS1	YNL224C	ARP5	P53946	755 aa		3.57	□□□□□ -1.84
SQS1	YNL224C	SND1	Q04007	877 aa		3.57	□□□□□ -1.84
SQS1	YNL224C	KRE28	Q04431	385 aa		3.57	□□□□□ -1.84
SQS1	YNL224C	ESC2	Q06340	456 aa		3.57	□□□□□ -1.84
SQS1	YNL224C	SPN1	Q06505	410 aa	Predicted RBP	3.57	□□□□□ -1.84
SQS1	YNL224C	RSC58	Q07979	502 aa		3.57	□□□□□ -1.84
SQS1	YNL224C	CDC53	Q12018	815 aa	Known RBP	3.57	□□□□□ -1.84
SQS1	YNL224C	TRL1	P09880	827 aa	Known RBP	3.56	□□□□□ -1.84
SQS1	YNL224C	ICL1	P28240	557 aa	Predicted RBP	3.56	□□□□□ -1.84
SQS1	YNL224C	BMH1	P29311	267 aa	Known RBP	3.56	□□□□□ -1.84
SQS1	YNL224C	RRP1	P35178	278 aa	Predicted RBP	3.56	□□□□□ -1.84
SQS1	YNL224C	LHS1	P36016	881 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	DED81	P38707	554 aa	Known RBP	3.56	□□□□□ -1.84
SQS1	YNL224C	NOP16	P40007	231 aa	Known RBP	3.56	□□□□□ -1.84
SQS1	YNL224C	SEC28	P40509	296 aa	Known RBP	3.56	□□□□□ -1.84
SQS1	YNL224C	INA22	P40576	216 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	NUP85	P46673	744 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	ECL1	P48235	211 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	TRF5	P48561	642 aa	Known RBP	3.56	□□□□□ -1.84
SQS1	YNL224C	MON1	P53129	644 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	YNR029C	P53729	429 aa	Known RBP	3.56	□□□□□ -1.84
SQS1	YNL224C	ALD6	P54115	500 aa	Known RBP	3.56	□□□□□ -1.84
SQS1	YNL224C	MLH2	Q07980	695 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	SDH5	Q08230	162 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	ADF1	Q2V2Q1	113 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	RAD50	P12753	1312 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	ROX1	P25042	368 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	YKL050C	P35736	922 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	TRZ1	P36159	838 aa	Predicted RBP	3.56	□□□□□ -1.84
SQS1	YNL224C	SIP3	P38717	1229 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	YHR131C	P38835	850 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	RTS1	P38903	757 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	SAP1	P39955	897 aa	Known RBP	3.56	□□□□□ -1.84
SQS1	YNL224C	SKP2	P42843	763 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	LOC1	P43586	204 aa	Predicted RBP	3.56	□□□□□ -1.84
SQS1	YNL224C	BNA6	P43619	295 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	CIT3	P43635	486 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	KXD1	P53158	218 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	MDR1	P53258	950 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	YNL144C	P53907	740 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	PHO92	Q06390	306 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	NOC3	Q07896	663 aa	Predicted RBP	3.56	□□□□□ -1.84
SQS1	YNL224C	LOT6	Q07923	191 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	LAP2	Q10740	671 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	MNL2	Q12205	849 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	SEC39	Q12745	709 aa		3.56	□□□□□ -1.84
SQS1	YNL224C	APA1	P16550	321 aa	Known RBP	3.55	□□□□□ -1.84
SQS1	YNL224C	HSP60	P19882	572 aa	Known RBP	3.55	□□□□□ -1.84
SQS1	YNL224C	VPH2	P32341	215 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	DAL1	P32375	460 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	YME2	P32843	850 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	PRS1	P32895	427 aa	Known RBP	3.55	□□□□□ -1.84
SQS1	YNL224C	YKT6	P36015	200 aa	Known RBP	3.55	□□□□□ -1.84
SQS1	YNL224C	ALG3	P38179	458 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	RIM11	P38615	370 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	CBR1	P38626	284 aa	Known RBP	3.55	□□□□□ -1.84
SQS1	YNL224C	YHB1	P39676	399 aa	Known RBP	3.55	□□□□□ -1.84
SQS1	YNL224C	MTW1	P39731	289 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	PCL7	P40186	285 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	EMP47	P43555	445 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	NUP84	P52891	726 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	MNP1	P53163	194 aa	Predicted RBP	3.55	□□□□□ -1.84
SQS1	YNL224C	CEG1	Q01159	459 aa	Predicted RBP	3.55	□□□□□ -1.84
SQS1	YNL224C	JIP4	Q03361	876 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	TRS130	Q03660	1102 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	UBX2	Q04228	584 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	UTP14	Q04500	899 aa	Known RBP	3.55	□□□□□ -1.84
SQS1	YNL224C	SGD1	Q06132	899 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	YDR056C	Q12025	205 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	RRP6	Q12149	733 aa	Known RBP	3.55	□□□□□ -1.84
SQS1	YNL224C	MED1	Q12321	566 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	TCB3	Q03640	1545 aa	Known RBP	3.55	□□□□□ -1.84
SQS1	YNL224C	HIS3	P06633	220 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	VPS3	P23643	1011 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	SRB4	P32569	687 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	DUR3	P33413	735 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	UIP5	P36137	443 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	JNM1	P36224	373 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	RRM3	P38766	723 aa		3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms