RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W EFB1P32471 206 aaKnown RBP5.47□□□□□ -1.53
CDC4YFL009W TFC3P34111 1160 aa5.47□□□□□ -1.53
CDC4YFL009W SHM1P37292 490 aaPredicted RBP5.47□□□□□ -1.53
CDC4YFL009W MAL33P38157 468 aa5.47□□□□□ -1.53
CDC4YFL009W SSN3P39073 555 aa5.47□□□□□ -1.53
CDC4YFL009W UFD2P54860 961 aa5.47□□□□□ -1.53
CDC4YFL009W RUD3Q12234 484 aaKnown RBP5.47□□□□□ -1.53
CDC4YFL009W NHA1Q99271 985 aa5.47□□□□□ -1.53
CDC4YFL009W SUP35P05453 685 aaKnown RBP5.47□□□□□ -1.53
CDC4YFL009W PMR1P13586 950 aa5.47□□□□□ -1.53
CDC4YFL009W THR4P16120 514 aaKnown RBP5.47□□□□□ -1.53
CDC4YFL009W SWC3P31376 625 aa5.47□□□□□ -1.53
CDC4YFL009W LIN1P38852 340 aaPredicted RBP5.47□□□□□ -1.53
CDC4YFL009W JJJ1P53863 590 aa5.47□□□□□ -1.53
CDC4YFL009W HED1Q03937 162 aa5.47□□□□□ -1.53
CDC4YFL009W RSA3Q05942 220 aaKnown RBP5.47□□□□□ -1.53
CDC4YFL009W SFH1Q06168 426 aa5.47□□□□□ -1.53
CDC4YFL009W BDS1Q08347 646 aa5.47□□□□□ -1.53
CDC4YFL009W HIF1Q12373 385 aa5.47□□□□□ -1.53
CDC4YFL009W COQ4O13525 335 aa5.46□□□□□ -1.54
CDC4YFL009W SWI6P09959 803 aa5.46□□□□□ -1.54
CDC4YFL009W CLN1P20437 546 aa5.46□□□□□ -1.54
CDC4YFL009W NAB2P32505 525 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
CDC4YFL009W RAD5P32849 1169 aaPredicted RBP5.46□□□□□ -1.54
CDC4YFL009W TBS1P38114 1094 aa5.46□□□□□ -1.54
CDC4YFL009W MGE1P38523 228 aa5.46□□□□□ -1.54
CDC4YFL009W RGD2P43556 714 aa5.46□□□□□ -1.54
CDC4YFL009W MTR4P47047 1073 aaKnown RBP5.46□□□□□ -1.54
CDC4YFL009W ASI1P54074 624 aa5.46□□□□□ -1.54
CDC4YFL009W CDC55Q00362 526 aa5.46□□□□□ -1.54
CDC4YFL009W RSC4Q02206 625 aa5.46□□□□□ -1.54
CDC4YFL009W CUS1Q02554 436 aaPredicted RBP5.46□□□□□ -1.54
CDC4YFL009W ELG1Q12050 791 aa5.46□□□□□ -1.54
CDC4YFL009W HSC82P15108 705 aaKnown RBP5.46□□□□□ -1.54
CDC4YFL009W KRS1P15180 591 aaKnown RBP5.46□□□□□ -1.54
CDC4YFL009W TPM1P17536 199 aaKnown RBP5.46□□□□□ -1.54
CDC4YFL009W GAL11P19659 1081 aa5.46□□□□□ -1.54
CDC4YFL009W ECM32P32644 1121 aaKnown RBP5.46□□□□□ -1.54
CDC4YFL009W NUF2P33895 451 aa5.46□□□□□ -1.54
CDC4YFL009W SCD5P34758 872 aa5.46□□□□□ -1.54
CDC4YFL009W CAJ1P39101 391 aa5.46□□□□□ -1.54
CDC4YFL009W YPT11P48559 417 aa5.46□□□□□ -1.54
CDC4YFL009W INP52P50942 1183 aa5.46□□□□□ -1.54
CDC4YFL009W YPL150WQ12152 901 aa5.46□□□□□ -1.54
CDC4YFL009W GLE1Q12315 538 aa5.46□□□□□ -1.54
CDC4YFL009W SAC3P46674 1301 aa5.46□□□□□ -1.54
CDC4YFL009W MLF3P32047 452 aa5.45□□□□□ -1.54
CDC4YFL009W VID28P40547 921 aa5.45□□□□□ -1.54
CDC4YFL009W CAF130P53280 1122 aaPredicted RBP5.45□□□□□ -1.54
CDC4YFL009W ALF1P53904 254 aa5.45□□□□□ -1.54
CDC4YFL009W JIP5Q06214 492 aaPredicted RBP5.45□□□□□ -1.54
CDC4YFL009W NOC3Q07896 663 aaPredicted RBP5.45□□□□□ -1.54
CDC4YFL009W SDH5Q08230 162 aa5.45□□□□□ -1.54
CDC4YFL009W TY1A-DR3Q12441 440 aa5.45□□□□□ -1.54
CDC4YFL009W DPS1P04802 557 aaKnown RBP5.45□□□□□ -1.54
CDC4YFL009W RPS24AP0CX31 135 aaKnown RBP5.45□□□□□ -1.54
CDC4YFL009W RPS24BP0CX32 135 aaKnown RBP5.45□□□□□ -1.54
CDC4YFL009W STO1P34160 861 aaKnown RBP5.45□□□□□ -1.54
CDC4YFL009W RPC37P36121 282 aa5.45□□□□□ -1.54
CDC4YFL009W PSY4P38193 441 aa5.45□□□□□ -1.54
CDC4YFL009W HUL4P40985 892 aa5.45□□□□□ -1.54
CDC4YFL009W VPS75P53853 264 aa5.45□□□□□ -1.54
CDC4YFL009W TSR1Q07381 788 aaKnown RBP5.45□□□□□ -1.54
CDC4YFL009W YOR223WQ12015 292 aa5.45□□□□□ -1.54
CDC4YFL009W NKP1Q12493 238 aa5.45□□□□□ -1.54
CDC4YFL009W TAL1P15019 335 aaKnown RBP5.44□□□□□ -1.54
CDC4YFL009W CLB4P24871 460 aa5.44□□□□□ -1.54
CDC4YFL009W CDC60P26637 1090 aaKnown RBP5.44□□□□□ -1.54
CDC4YFL009W BUD14P27637 709 aa5.44□□□□□ -1.54
CDC4YFL009W ECM21P38167 1117 aaKnown RBP5.44□□□□□ -1.54
CDC4YFL009W BOI2P39969 1040 aa5.44□□□□□ -1.54
CDC4YFL009W SIT1P39980 628 aa5.44□□□□□ -1.54
CDC4YFL009W BUD16P39988 312 aa5.44□□□□□ -1.54
CDC4YFL009W SEC9P40357 651 aa5.44□□□□□ -1.54
CDC4YFL009W HXT8P40886 569 aa5.44□□□□□ -1.54
CDC4YFL009W YJR142WP47173 342 aa5.44□□□□□ -1.54
CDC4YFL009W MRPS35P53292 345 aa5.44□□□□□ -1.54
CDC4YFL009W IST1P53843 298 aaPredicted RBP5.44□□□□□ -1.54
CDC4YFL009W SEC5P89102 971 aa5.44□□□□□ -1.54
CDC4YFL009W ATG23Q06671 453 aa5.44□□□□□ -1.54
CDC4YFL009W UTP4Q06679 776 aaKnown RBP5.44□□□□□ -1.54
CDC4YFL009W Q0182Q9ZZW1 134 aa5.44□□□□□ -1.54
CDC4YFL009W ADE6P38972 1358 aaKnown RBP5.44□□□□□ -1.54
CDC4YFL009W NAT1P12945 854 aaKnown RBP5.43□□□□□ -1.54
CDC4YFL009W DAL7P21826 554 aa5.43□□□□□ -1.54
CDC4YFL009W PDB1P32473 366 aaKnown RBP5.43□□□□□ -1.54
CDC4YFL009W AIR1P40507 360 aaKnown RBP5.43□□□□□ -1.54
CDC4YFL009W SPO22P40511 975 aa5.43□□□□□ -1.54
CDC4YFL009W ADE12P80210 433 aaKnown RBP5.43□□□□□ -1.54
CDC4YFL009W TMA16Q08687 178 aa5.43□□□□□ -1.54
CDC4YFL009W MSN1P22148 382 aa5.43□□□□□ -1.54
CDC4YFL009W AMS1P22855 1083 aa5.43□□□□□ -1.54
CDC4YFL009W BRF1P29056 596 aa5.43□□□□□ -1.54
CDC4YFL009W LHS1P36016 881 aa5.43□□□□□ -1.54
CDC4YFL009W FAA3P39002 694 aa5.43□□□□□ -1.54
CDC4YFL009W AIM20P40451 204 aa5.43□□□□□ -1.54
CDC4YFL009W YRB1P41920 201 aaKnown RBP5.43□□□□□ -1.54
CDC4YFL009W YJR079WP47126 109 aa5.43□□□□□ -1.54
CDC4YFL009W SHE4P51534 789 aa5.43□□□□□ -1.54
CDC4YFL009W VPS16Q03308 798 aa5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms