RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C TIF6Q12522 245 aaKnown RBP8.66□□□□□ -1.02
PUP3YER094C CDC37P06101 506 aaKnown RBP8.65□□□□□ -1.02
PUP3YER094C OM45P16547 393 aa8.65□□□□□ -1.02
PUP3YER094C ISY1P21374 235 aaPredicted RBP8.65□□□□□ -1.02
PUP3YER094C TKL1P23254 680 aaKnown RBP8.65□□□□□ -1.02
PUP3YER094C MOT2P34909 587 aaKnown RBP8.65□□□□□ -1.02
PUP3YER094C PSY4P38193 441 aa8.65□□□□□ -1.02
PUP3YER094C NUP82P40368 713 aa8.65□□□□□ -1.02
PUP3YER094C TFG2P41896 400 aaPredicted RBP8.65□□□□□ -1.02
PUP3YER094C UBP15P50101 1230 aa8.65□□□□□ -1.02
PUP3YER094C ZPR1P53303 486 aaKnown RBP8.65□□□□□ -1.02
PUP3YER094C TMA16Q08687 178 aa8.65□□□□□ -1.02
PUP3YER094C YPL216WQ08964 1102 aa8.65□□□□□ -1.02
PUP3YER094C MCM2P29469 868 aa8.64□□□□□ -1.03
PUP3YER094C PSO2P30620 661 aa8.64□□□□□ -1.03
PUP3YER094C VPS29P38759 282 aa8.64□□□□□ -1.03
PUP3YER094C BCD1P38772 366 aa8.64□□□□□ -1.03
PUP3YER094C PRP22P24384 1145 aaKnown RBP8.63□□□□□ -1.03
PUP3YER094C MRC1P25588 1096 aa8.63□□□□□ -1.03
PUP3YER094C CDC48P25694 835 aaKnown RBP8.63□□□□□ -1.03
PUP3YER094C SEC8P32855 1065 aa8.63□□□□□ -1.03
PUP3YER094C YKL091CP33324 310 aaKnown RBP8.63□□□□□ -1.03
PUP3YER094C TFC4P33339 1025 aa8.63□□□□□ -1.03
PUP3YER094C MPE1P35728 441 aaKnown RBP8.63□□□□□ -1.03
PUP3YER094C RPN3P40016 523 aaKnown RBP8.63□□□□□ -1.03
PUP3YER094C ULP2P40537 1034 aaPredicted RBP8.63□□□□□ -1.03
PUP3YER094C MGA2P40578 1113 aa8.63□□□□□ -1.03
PUP3YER094C YGR237CP50089 785 aa8.63□□□□□ -1.03
PUP3YER094C SEC5P89102 971 aa8.63□□□□□ -1.03
PUP3YER094C YLR225CQ05948 407 aaKnown RBP8.63□□□□□ -1.03
PUP3YER094C RGT1P32862 1170 aa8.62□□□□□ -1.03
PUP3YER094C SPT8P38915 602 aa8.62□□□□□ -1.03
PUP3YER094C HMF1P40037 129 aaKnown RBP8.62□□□□□ -1.03
PUP3YER094C FIS1P40515 155 aa8.62□□□□□ -1.03
PUP3YER094C TOS3P43637 560 aa8.62□□□□□ -1.03
PUP3YER094C VPS53P47061 822 aa8.62□□□□□ -1.03
PUP3YER094C EBS1Q03466 884 aaKnown RBP8.62□□□□□ -1.03
PUP3YER094C MSC6Q08818 692 aaKnown RBP8.62□□□□□ -1.03
PUP3YER094C YDR461C-AQ2V2P7 80 aa8.62□□□□□ -1.03
PUP3YER094C TCP1P12612 559 aaKnown RBP8.61□□□□□ -1.03
PUP3YER094C MSH3P25336 1018 aa8.61□□□□□ -1.03
PUP3YER094C EBP2P36049 427 aaKnown RBP8.61□□□□□ -1.03
PUP3YER094C SAP190P36123 1033 aa8.61□□□□□ -1.03
PUP3YER094C BIM1P40013 344 aa8.61□□□□□ -1.03
PUP3YER094C YFL034WP43564 1073 aa8.61□□□□□ -1.03
PUP3YER094C AIP1P46680 615 aaKnown RBP8.61□□□□□ -1.03
PUP3YER094C TOF1P53840 1238 aa8.61□□□□□ -1.03
PUP3YER094C NCS2P53923 493 aaPredicted RBP8.61□□□□□ -1.03
PUP3YER094C YMR321CQ04898 105 aa8.61□□□□□ -1.03
PUP3YER094C YDL057WQ07379 328 aa8.61□□□□□ -1.03
PUP3YER094C YAP7Q08182 245 aa8.61□□□□□ -1.03
PUP3YER094C YOL075CQ08234 1294 aa8.61□□□□□ -1.03
PUP3YER094C MET7Q08645 548 aa8.61□□□□□ -1.03
PUP3YER094C RPC53P25441 422 aa8.6□□□□□ -1.03
PUP3YER094C ATG19P35193 415 aa8.6□□□□□ -1.03
PUP3YER094C YET1P35723 206 aa8.6□□□□□ -1.03
PUP3YER094C DBP7P36120 742 aaKnown RBP8.6□□□□□ -1.03
PUP3YER094C GPI13Q07830 1017 aa8.6□□□□□ -1.03
PUP3YER094C YLL058WQ12198 575 aa8.6□□□□□ -1.03
PUP3YER094C DBP5P20449 482 aaKnown RBP8.59□□□□□ -1.03
PUP3YER094C PRE10P21242 288 aaKnown RBP RIP-Chip data8.59□□□□□ -1.03not detected
PUP3YER094C MRF1P30775 413 aaPredicted RBP8.59□□□□□ -1.03
PUP3YER094C TVP38P36164 337 aa8.59□□□□□ -1.03
PUP3YER094C MXR1P40029 184 aa8.59□□□□□ -1.03
PUP3YER094C HUL4P40985 892 aa8.59□□□□□ -1.03
PUP3YER094C RPS7BP48164 190 aaKnown RBP8.59□□□□□ -1.03
PUP3YER094C NBP1P52919 319 aaPredicted RBP8.59□□□□□ -1.03
PUP3YER094C VPS75P53853 264 aa8.59□□□□□ -1.03
PUP3YER094C SMC5Q08204 1093 aa8.59□□□□□ -1.03
PUP3YER094C YPL277CQ08989 487 aa8.59□□□□□ -1.03
PUP3YER094C TRM11Q12463 433 aa8.59□□□□□ -1.03
PUP3YER094C MAK16P10962 306 aaPredicted RBP8.58□□□□□ -1.04
PUP3YER094C PCK1P10963 549 aa8.58□□□□□ -1.04
PUP3YER094C YUR1P26725 428 aa8.58□□□□□ -1.04
PUP3YER094C SEC65P29478 273 aa8.58□□□□□ -1.04
PUP3YER094C RPC25P35718 212 aa8.58□□□□□ -1.04
PUP3YER094C PGM2P37012 569 aaKnown RBP8.58□□□□□ -1.04
PUP3YER094C CTM1P38818 585 aa8.58□□□□□ -1.04
PUP3YER094C FYV8P46949 817 aaKnown RBP8.58□□□□□ -1.04
PUP3YER094C CCM1P48237 864 aaPredicted RBP8.58□□□□□ -1.04
PUP3YER094C MDR1P53258 950 aa8.58□□□□□ -1.04
PUP3YER094C TCO89Q08921 799 aa8.58□□□□□ -1.04
PUP3YER094C PDC1P06169 563 aaKnown RBP8.57□□□□□ -1.04
PUP3YER094C CYC8P14922 966 aa8.57□□□□□ -1.04
PUP3YER094C DAL7P21826 554 aa8.57□□□□□ -1.04
PUP3YER094C UBP13P38187 747 aa8.57□□□□□ -1.04
PUP3YER094C YEL025CP39991 1188 aa8.57□□□□□ -1.04
PUP3YER094C VID30P53076 958 aa8.57□□□□□ -1.04
PUP3YER094C ARK1P53974 638 aa8.57□□□□□ -1.04
PUP3YER094C SPO75Q07798 868 aa8.57□□□□□ -1.04
PUP3YER094C NOC3Q07896 663 aaPredicted RBP8.57□□□□□ -1.04
PUP3YER094C NCR1Q12200 1170 aa8.57□□□□□ -1.04
PUP3YER094C MED1Q12321 566 aa8.57□□□□□ -1.04
PUP3YER094C SRF1Q12516 437 aa8.57□□□□□ -1.04
PUP3YER094C RPS6AP0CX37 236 aaKnown RBP8.56□□□□□ -1.04
PUP3YER094C RPS6BP0CX38 236 aaPredicted RBP8.56□□□□□ -1.04
PUP3YER094C PHO8P11491 566 aa8.56□□□□□ -1.04
PUP3YER094C PHO13P19881 312 aa8.56□□□□□ -1.04
PUP3YER094C TRK2P28584 889 aa8.56□□□□□ -1.04
PUP3YER094C YSC83P32792 385 aa8.56□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms