RNA–Protein interactions for RNA: YBR097W

VPS15, Transcript of Serine/threonine protein kinase involved in vacuolar protein sorting, yeastyeast

Gene VPS15, Length 4,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS15YBR097W EMP47P43555 445 aa1.78□□□□□ -2.12
VPS15YBR097W HST2P53686 357 aa1.78□□□□□ -2.12
VPS15YBR097W UBX4P54730 416 aa1.78□□□□□ -2.12
VPS15YBR097W ERV25P54837 211 aaKnown RBP1.78□□□□□ -2.12
VPS15YBR097W RRN5Q02983 363 aa1.78□□□□□ -2.12
VPS15YBR097W NSE5Q03718 556 aa1.78□□□□□ -2.12
VPS15YBR097W YMR196WQ04336 1088 aa1.78□□□□□ -2.12
VPS15YBR097W RCO1Q04779 684 aa1.78□□□□□ -2.12
VPS15YBR097W YLR287CQ05881 355 aa1.78□□□□□ -2.12
VPS15YBR097W RSC2Q06488 889 aa1.78□□□□□ -2.12
VPS15YBR097W RSC3Q06639 885 aa1.78□□□□□ -2.12
VPS15YBR097W NOT5Q12514 560 aaPredicted RBP1.78□□□□□ -2.12
VPS15YBR097W ATG11Q12527 1178 aa1.78□□□□□ -2.12
VPS15YBR097W PMS1P14242 873 aa1.78□□□□□ -2.12
VPS15YBR097W PRP22P24384 1145 aaKnown RBP1.78□□□□□ -2.12
VPS15YBR097W RRP43P25359 394 aaPredicted RBP1.78□□□□□ -2.12
VPS15YBR097W FEN2P25621 512 aaKnown RBP1.78□□□□□ -2.12
VPS15YBR097W RAD5P32849 1169 aaPredicted RBP1.78□□□□□ -2.12
VPS15YBR097W DUR3P33413 735 aa1.78□□□□□ -2.12
VPS15YBR097W YKL023WP36103 277 aaKnown RBP1.78□□□□□ -2.12
VPS15YBR097W TFA2P36145 328 aa1.78□□□□□ -2.12
VPS15YBR097W SHE3P38272 425 aaKnown RBP1.78□□□□□ -2.12
VPS15YBR097W CIC1P38779 376 aaKnown RBP1.78□□□□□ -2.12
VPS15YBR097W APE4P38821 490 aa1.78□□□□□ -2.12
VPS15YBR097W TPA1P40032 644 aaKnown RBP1.78□□□□□ -2.12
VPS15YBR097W YJL070CP40361 888 aa1.78□□□□□ -2.12
VPS15YBR097W SLM1P40485 686 aa1.78□□□□□ -2.12
VPS15YBR097W SHQ1P40486 507 aaPredicted RBP1.78□□□□□ -2.12
VPS15YBR097W ULP2P40537 1034 aaPredicted RBP1.78□□□□□ -2.12
VPS15YBR097W SAM37P50110 327 aa1.78□□□□□ -2.12
VPS15YBR097W FPK1P53739 893 aa1.78□□□□□ -2.12
VPS15YBR097W ATG4P53867 494 aa1.78□□□□□ -2.12
VPS15YBR097W RIA1P53893 1110 aa1.78□□□□□ -2.12
VPS15YBR097W SPO19Q03029 223 aa1.78□□□□□ -2.12
VPS15YBR097W YMR209CQ03648 457 aa1.78□□□□□ -2.12
VPS15YBR097W ARP9Q05123 467 aa1.78□□□□□ -2.12
VPS15YBR097W DON1Q05610 365 aa1.78□□□□□ -2.12
VPS15YBR097W YLR281CQ05863 155 aa1.78□□□□□ -2.12
VPS15YBR097W CSC1Q06538 782 aa1.78□□□□□ -2.12
VPS15YBR097W YPD1Q07688 167 aa1.78□□□□□ -2.12
VPS15YBR097W ABP140Q08641 628 aaKnown RBP1.78□□□□□ -2.12
VPS15YBR097W MCM16Q12262 181 aa1.78□□□□□ -2.12
VPS15YBR097W MSB4Q12317 492 aa1.78□□□□□ -2.12
VPS15YBR097W SNF8Q12483 233 aa1.78□□□□□ -2.12
VPS15YBR097W TUB2P02557 457 aaKnown RBP1.78□□□□□ -2.12
VPS15YBR097W RAD6P06104 172 aa1.78□□□□□ -2.12
VPS15YBR097W KIN1P13185 1064 aa1.78□□□□□ -2.12
VPS15YBR097W THR4P16120 514 aaKnown RBP1.78□□□□□ -2.12
VPS15YBR097W NUP120P35729 1037 aa1.78□□□□□ -2.12
VPS15YBR097W SLI15P38283 698 aa1.78□□□□□ -2.12
VPS15YBR097W MGE1P38523 228 aa1.78□□□□□ -2.12
VPS15YBR097W TAF6P53040 516 aa1.78□□□□□ -2.12
VPS15YBR097W CWC22P53333 577 aaKnown RBP1.78□□□□□ -2.12
VPS15YBR097W BOP3P53958 396 aa1.78□□□□□ -2.12
VPS15YBR097W FDC1Q03034 503 aa1.78□□□□□ -2.12
VPS15YBR097W PEX29Q03370 554 aa1.78□□□□□ -2.12
VPS15YBR097W USA1Q03714 838 aa1.78□□□□□ -2.12
VPS15YBR097W AIM32Q04689 311 aa1.78□□□□□ -2.12
VPS15YBR097W RBS1Q05672 457 aaKnown RBP1.78□□□□□ -2.12
VPS15YBR097W AVO1Q08236 1176 aa1.78□□□□□ -2.12
VPS15YBR097W ZEO1Q08245 113 aa1.78□□□□□ -2.12
VPS15YBR097W CUE5Q08412 411 aaKnown RBP1.78□□□□□ -2.12
VPS15YBR097W SAM3Q08986 587 aa1.78□□□□□ -2.12
VPS15YBR097W SSF2Q12153 453 aaPredicted RBP1.78□□□□□ -2.12
VPS15YBR097W YOR114WQ12219 294 aa1.78□□□□□ -2.12
VPS15YBR097W YVC1Q12324 675 aa1.78□□□□□ -2.12
VPS15YBR097W VAS1P07806 1104 aaKnown RBP1.77□□□□□ -2.13
VPS15YBR097W RGR1P19263 1082 aa1.77□□□□□ -2.13
VPS15YBR097W ACO1P19414 778 aaKnown RBP RIP-Chip data1.77□□□□□ -2.13not detected
VPS15YBR097W ESL2P36168 1195 aa1.77□□□□□ -2.13
VPS15YBR097W ATP3P38077 311 aaKnown RBP1.77□□□□□ -2.13
VPS15YBR097W DED81P38707 554 aaKnown RBP1.77□□□□□ -2.13
VPS15YBR097W YHR218WP38899 603 aa1.77□□□□□ -2.13
VPS15YBR097W NPT1P39683 429 aaKnown RBP1.77□□□□□ -2.13
VPS15YBR097W NUP82P40368 713 aa1.77□□□□□ -2.13
VPS15YBR097W CDC40P40968 455 aaPredicted RBP1.77□□□□□ -2.13
VPS15YBR097W UBP6P43593 499 aaKnown RBP1.77□□□□□ -2.13
VPS15YBR097W RET2P43621 546 aa1.77□□□□□ -2.13
VPS15YBR097W XPT1P47165 209 aa1.77□□□□□ -2.13
VPS15YBR097W YGR021WP53212 290 aa1.77□□□□□ -2.13
VPS15YBR097W FYV6P53913 173 aa1.77□□□□□ -2.13
VPS15YBR097W HEF3P53978 1044 aaKnown RBP1.77□□□□□ -2.13
VPS15YBR097W SPP1Q03012 353 aa1.77□□□□□ -2.13
VPS15YBR097W APL4Q12028 832 aa1.77□□□□□ -2.13
VPS15YBR097W TSR3Q12094 313 aaKnown RBP1.77□□□□□ -2.13
VPS15YBR097W CMR1Q12510 522 aaKnown RBP1.77□□□□□ -2.13
VPS15YBR097W RPL6BP05739 176 aaKnown RBP1.77□□□□□ -2.13
VPS15YBR097W SWI5P08153 709 aa1.77□□□□□ -2.13
VPS15YBR097W SIT4P20604 311 aa1.77□□□□□ -2.13
VPS15YBR097W PRP28P23394 588 aa1.77□□□□□ -2.13
VPS15YBR097W MET4P32389 672 aa1.77□□□□□ -2.13
VPS15YBR097W FRD1P32614 470 aaKnown RBP1.77□□□□□ -2.13
VPS15YBR097W BUD2P33314 1104 aa1.77□□□□□ -2.13
VPS15YBR097W MDJ1P35191 511 aa1.77□□□□□ -2.13
VPS15YBR097W BOI1P38041 980 aaKnown RBP1.77□□□□□ -2.13
VPS15YBR097W YJL206CP39529 758 aa1.77□□□□□ -2.13
VPS15YBR097W GID8P40208 455 aa1.77□□□□□ -2.13
VPS15YBR097W RNR4P49723 345 aaKnown RBP1.77□□□□□ -2.13
VPS15YBR097W ZIP2P53061 704 aa1.77□□□□□ -2.13
VPS15YBR097W NUT1P53114 1132 aa1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 64.9 ms