RNA–Protein interactions for RNA: YBR097W

VPS15, Transcript of Serine/threonine protein kinase involved in vacuolar protein sorting, yeastyeast

Gene VPS15, Length 4,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS15YBR097W MON2P48563 1636 aaPredicted RBP3.32□□□□□ -1.88
VPS15YBR097W KOG1P38873 1557 aa2.91□□□□□ -1.94
VPS15YBR097W SPA2P23201 1466 aaKnown RBP2.9□□□□□ -1.95
VPS15YBR097W SWR1Q05471 1514 aa2.85□□□□□ -1.95
VPS15YBR097W MIF2P35201 549 aa2.81□□□□□ -1.96
VPS15YBR097W INO80P53115 1489 aa2.74□□□□□ -1.97
VPS15YBR097W DNA2P38859 1522 aa2.72□□□□□ -1.97
VPS15YBR097W RQC2Q12532 1038 aaKnown RBP2.69□□□□□ -1.98
VPS15YBR097W IRC20Q06554 1556 aa2.68□□□□□ -1.98
VPS15YBR097W RSE1Q04693 1361 aaKnown RBP2.66□□□□□ -1.98
VPS15YBR097W DNF1P32660 1571 aa2.64□□□□□ -1.99
VPS15YBR097W MYO2P19524 1574 aaKnown RBP2.6□□□□□ -1.99
VPS15YBR097W SSK2P53599 1579 aa2.59□□□□□ -2
VPS15YBR097W TY1B-DR4Q07793 1604 aa2.58□□□□□ -2
VPS15YBR097W MDS3P53094 1487 aa2.56□□□□□ -2
VPS15YBR097W TFA1P36100 482 aa2.56□□□□□ -2
VPS15YBR097W THO2P53552 1597 aaKnown RBP2.52□□□□□ -2.01
VPS15YBR097W REV3P14284 1504 aa2.5□□□□□ -2.01
VPS15YBR097W PEP1P32319 1579 aa2.49□□□□□ -2.01
VPS15YBR097W ESC1Q03661 1658 aaKnown RBP2.47□□□□□ -2.01
VPS15YBR097W YOR093CQ12275 1648 aa2.46□□□□□ -2.02
VPS15YBR097W AIM44Q99299 758 aa2.45□□□□□ -2.02
VPS15YBR097W DRS1P32892 752 aaKnown RBP2.44□□□□□ -2.02
VPS15YBR097W MTC1P47018 478 aaKnown RBP2.44□□□□□ -2.02
VPS15YBR097W LTE1P07866 1435 aa2.43□□□□□ -2.02
VPS15YBR097W BNI1P41832 1953 aa2.43□□□□□ -2.02
VPS15YBR097W TCB3Q03640 1545 aaKnown RBP2.41□□□□□ -2.02
VPS15YBR097W YFR006WP43590 535 aa2.4□□□□□ -2.03
VPS15YBR097W FPR3P38911 411 aaKnown RBP2.39□□□□□ -2.03
VPS15YBR097W MNN4P36044 1178 aa2.39□□□□□ -2.03
VPS15YBR097W SCT1P32784 759 aa2.38□□□□□ -2.03
VPS15YBR097W MET5P47169 1442 aa2.37□□□□□ -2.03
VPS15YBR097W RPA190P10964 1664 aaKnown RBP2.37□□□□□ -2.03
VPS15YBR097W TAF7Q05021 590 aa2.36□□□□□ -2.03
VPS15YBR097W FAP1P53971 965 aa2.35□□□□□ -2.03
VPS15YBR097W NTE1Q04958 1679 aa2.35□□□□□ -2.03
VPS15YBR097W PDR15Q04182 1529 aaKnown RBP2.34□□□□□ -2.03
VPS15YBR097W CDC25P04821 1589 aa2.33□□□□□ -2.04
VPS15YBR097W DNF2Q12675 1612 aa2.32□□□□□ -2.04
VPS15YBR097W ASF1P32447 279 aa2.31□□□□□ -2.04
VPS15YBR097W LEO1P38439 464 aa2.3□□□□□ -2.04
VPS15YBR097W HIR3P47171 1648 aa2.29□□□□□ -2.04
VPS15YBR097W SIN3P22579 1536 aa2.28□□□□□ -2.04
VPS15YBR097W RPO31P04051 1460 aa2.26□□□□□ -2.05
VPS15YBR097W SNF2P22082 1703 aa2.26□□□□□ -2.05
VPS15YBR097W YCF1P39109 1515 aaKnown RBP2.24□□□□□ -2.05
VPS15YBR097W BPT1P14772 1559 aa2.23□□□□□ -2.05
VPS15YBR097W NOP2P40991 618 aaKnown RBP2.23□□□□□ -2.05
VPS15YBR097W SAS10Q12136 610 aaPredicted RBP2.23□□□□□ -2.05
VPS15YBR097W LEU3P08638 886 aa2.22□□□□□ -2.05
VPS15YBR097W RNA1P11745 407 aaKnown RBP2.22□□□□□ -2.05
VPS15YBR097W AVT3P36062 692 aa2.22□□□□□ -2.05
VPS15YBR097W BFR2Q06631 534 aaKnown RBP2.22□□□□□ -2.05
VPS15YBR097W FUN12P39730 1002 aaKnown RBP2.21□□□□□ -2.05
VPS15YBR097W GEA2P39993 1459 aaKnown RBP2.2□□□□□ -2.06
VPS15YBR097W DEF1P35732 738 aaKnown RBP2.2□□□□□ -2.06
VPS15YBR097W YRB30P53107 440 aaPredicted RBP2.2□□□□□ -2.06
VPS15YBR097W PRY3P47033 881 aa2.2□□□□□ -2.06
VPS15YBR097W RKR1Q04781 1562 aa2.2□□□□□ -2.06
VPS15YBR097W NAP1P25293 417 aaKnown RBP2.2□□□□□ -2.06
VPS15YBR097W QCR6P00127 147 aa2.19□□□□□ -2.06
VPS15YBR097W NAB3P38996 802 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
VPS15YBR097W NOP53Q12080 455 aaKnown RBP2.19□□□□□ -2.06
VPS15YBR097W DOS2P54858 310 aa2.19□□□□□ -2.06
VPS15YBR097W ORC1P54784 914 aaPredicted RBP2.19□□□□□ -2.06
VPS15YBR097W CAB3P36076 571 aa2.18□□□□□ -2.06
VPS15YBR097W TOP1P04786 769 aa2.18□□□□□ -2.06
VPS15YBR097W HAP1P0CE41 1502 aa2.17□□□□□ -2.06
VPS15YBR097W HGH1P48362 394 aaKnown RBP2.16□□□□□ -2.06
VPS15YBR097W YGL081WP53156 320 aa2.16□□□□□ -2.06
VPS15YBR097W BUD4P47136 1447 aa2.16□□□□□ -2.06
VPS15YBR097W IFH1P39520 1085 aa2.16□□□□□ -2.06
VPS15YBR097W NOP7P53261 605 aaKnown RBP2.14□□□□□ -2.07
VPS15YBR097W CHC1P22137 1653 aaKnown RBP2.14□□□□□ -2.07
VPS15YBR097W DOP1Q03921 1698 aa2.14□□□□□ -2.07
VPS15YBR097W EBP2P36049 427 aaKnown RBP2.14□□□□□ -2.07
VPS15YBR097W HSL1P34244 1518 aa2.13□□□□□ -2.07
VPS15YBR097W SGS1P35187 1447 aa2.13□□□□□ -2.07
VPS15YBR097W SVF1Q05515 481 aa2.13□□□□□ -2.07
VPS15YBR097W ENP1P38333 483 aaKnown RBP2.12□□□□□ -2.07
VPS15YBR097W HSP82P02829 709 aaKnown RBP2.11□□□□□ -2.07
VPS15YBR097W DPB3P27344 201 aa2.11□□□□□ -2.07
VPS15YBR097W HSC82P15108 705 aaKnown RBP2.11□□□□□ -2.07
VPS15YBR097W YRF1-2P40105 1681 aa2.11□□□□□ -2.07
VPS15YBR097W NMD2P38798 1089 aaKnown RBP2.1□□□□□ -2.07
VPS15YBR097W ATG2P53855 1592 aa2.1□□□□□ -2.07
VPS15YBR097W NOP8Q08287 484 aaPredicted RBP2.1□□□□□ -2.07
VPS15YBR097W MFT1P33441 392 aaKnown RBP2.1□□□□□ -2.07
VPS15YBR097W RTT106P40161 455 aa2.1□□□□□ -2.07
VPS15YBR097W DNF3Q12674 1656 aa2.09□□□□□ -2.07
VPS15YBR097W RPS0AP32905 252 aaKnown RBP2.09□□□□□ -2.08
VPS15YBR097W PSH1Q12161 406 aa2.09□□□□□ -2.08
VPS15YBR097W SIS2P36024 562 aa2.08□□□□□ -2.08
VPS15YBR097W EDE1P34216 1381 aa2.08□□□□□ -2.08
VPS15YBR097W ESP1Q03018 1630 aa2.08□□□□□ -2.08
VPS15YBR097W RPN1P38764 993 aaKnown RBP2.08□□□□□ -2.08
VPS15YBR097W RIX1P38883 763 aaPredicted RBP2.07□□□□□ -2.08
VPS15YBR097W PLP2Q12017 286 aa2.07□□□□□ -2.08
VPS15YBR097W MMS1Q06211 1407 aa2.07□□□□□ -2.08
VPS15YBR097W POL5P39985 1022 aaKnown RBP2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms