RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C ROG3P43602 733 aa8.49□□□□□ -1.05
SNP1YIL061C SOL4P53315 255 aa8.49□□□□□ -1.05
SNP1YIL061C CBK1P53894 756 aa8.49□□□□□ -1.05
SNP1YIL061C HOS3Q02959 697 aaKnown RBP8.49□□□□□ -1.05
SNP1YIL061C BUL2Q03758 920 aaKnown RBP8.49□□□□□ -1.05
SNP1YIL061C ADY4Q05955 493 aa8.49□□□□□ -1.05
SNP1YIL061C UTP4Q06679 776 aaKnown RBP8.49□□□□□ -1.05
SNP1YIL061C NOP58Q12499 511 aaKnown RBP8.49□□□□□ -1.05
SNP1YIL061C YEL076C-AP0CX16 216 aa8.48□□□□□ -1.05
SNP1YIL061C YLR464WP0CX17 216 aa8.48□□□□□ -1.05
SNP1YIL061C HPR1P17629 752 aaKnown RBP8.48□□□□□ -1.05
SNP1YIL061C MSH3P25336 1018 aa8.48□□□□□ -1.05
SNP1YIL061C PSO2P30620 661 aa8.48□□□□□ -1.05
SNP1YIL061C GAA1P39012 614 aa8.48□□□□□ -1.05
SNP1YIL061C YEL076CP39971 216 aa8.48□□□□□ -1.05
SNP1YIL061C CEP3P40969 608 aa8.48□□□□□ -1.05
SNP1YIL061C FET4P40988 552 aa8.48□□□□□ -1.05
SNP1YIL061C CBP1P07252 654 aa8.47□□□□□ -1.05
SNP1YIL061C ERG12P07277 443 aa8.47□□□□□ -1.05
SNP1YIL061C RPS6AP0CX37 236 aaKnown RBP8.47□□□□□ -1.05
SNP1YIL061C RPS6BP0CX38 236 aaPredicted RBP8.47□□□□□ -1.05
SNP1YIL061C PWP2P25635 923 aaKnown RBP8.47□□□□□ -1.05
SNP1YIL061C SEC65P29478 273 aa8.47□□□□□ -1.05
SNP1YIL061C PCH2P38126 564 aa8.47□□□□□ -1.05
SNP1YIL061C ISW1P38144 1129 aa8.47□□□□□ -1.05
SNP1YIL061C MIP6P38760 659 aaKnown RBP8.47□□□□□ -1.05
SNP1YIL061C FYV8P46949 817 aaKnown RBP8.47□□□□□ -1.05
SNP1YIL061C ALF1P53904 254 aa8.47□□□□□ -1.05
SNP1YIL061C MFM1Q02783 413 aa8.47□□□□□ -1.05
SNP1YIL061C AIM33Q04516 312 aa8.47□□□□□ -1.05
SNP1YIL061C FUS2Q05670 677 aa8.47□□□□□ -1.05
SNP1YIL061C TLG2Q08144 397 aa8.47□□□□□ -1.05
SNP1YIL061C SMC6Q12749 1114 aa8.47□□□□□ -1.05
SNP1YIL061C GSY1P23337 708 aa8.46□□□□□ -1.06
SNP1YIL061C EFM2P38347 419 aa8.46□□□□□ -1.06
SNP1YIL061C SUL1P38359 859 aa8.46□□□□□ -1.06
SNP1YIL061C ORC6P38826 435 aa8.46□□□□□ -1.06
SNP1YIL061C RTT107P38850 1070 aa8.46□□□□□ -1.06
SNP1YIL061C CCC2P38995 1004 aa8.46□□□□□ -1.06
SNP1YIL061C NUP82P40368 713 aa8.46□□□□□ -1.06
SNP1YIL061C YGR273CP53329 174 aa8.46□□□□□ -1.06
SNP1YIL061C SQS1P53866 767 aaKnown RBP8.46□□□□□ -1.06
SNP1YIL061C VPS38Q05919 439 aa8.46□□□□□ -1.06
SNP1YIL061C COG4Q06096 861 aa8.46□□□□□ -1.06
SNP1YIL061C YOL075CQ08234 1294 aa8.46□□□□□ -1.06
SNP1YIL061C HMI1Q12039 706 aa8.46□□□□□ -1.06
SNP1YIL061C PET111P08468 800 aa8.45□□□□□ -1.06
SNP1YIL061C HOP09932 586 aa8.45□□□□□ -1.06
SNP1YIL061C KRS1P15180 591 aaKnown RBP8.45□□□□□ -1.06
SNP1YIL061C UGA4P32837 571 aa8.45□□□□□ -1.06
SNP1YIL061C YKL091CP33324 310 aaKnown RBP8.45□□□□□ -1.06
SNP1YIL061C TPS3P38426 1054 aaKnown RBP8.45□□□□□ -1.06
SNP1YIL061C NDT80P38830 627 aa8.45□□□□□ -1.06
SNP1YIL061C SPT8P38915 602 aa8.45□□□□□ -1.06
SNP1YIL061C FMS1P50264 508 aa8.45□□□□□ -1.06
SNP1YIL061C HFM1P51979 1187 aa8.45□□□□□ -1.06
SNP1YIL061C OYE2Q03558 400 aaKnown RBP8.45□□□□□ -1.06
SNP1YIL061C YAP7Q08182 245 aa8.45□□□□□ -1.06
SNP1YIL061C ATG9Q12142 997 aa8.45□□□□□ -1.06
SNP1YIL061C YLR278CQ05854 1341 aa8.45□□□□□ -1.06
SNP1YIL061C RIM101P33400 625 aa8.44□□□□□ -1.06
SNP1YIL061C ACA1P39970 489 aa8.44□□□□□ -1.06
SNP1YIL061C EMP47P43555 445 aa8.44□□□□□ -1.06
SNP1YIL061C OSW7P43611 510 aa8.44□□□□□ -1.06
SNP1YIL061C ORC4P54791 529 aa8.44□□□□□ -1.06
SNP1YIL061C OXR1Q08952 273 aa8.44□□□□□ -1.06
SNP1YIL061C CSR2Q12734 1121 aa8.44□□□□□ -1.06
SNP1YIL061C MAK16P10962 306 aaPredicted RBP8.43□□□□□ -1.06
SNP1YIL061C GAL2P13181 574 aa8.43□□□□□ -1.06
SNP1YIL061C SEC23P15303 768 aaKnown RBP8.43□□□□□ -1.06
SNP1YIL061C OM45P16547 393 aa8.43□□□□□ -1.06
SNP1YIL061C RTG2P32608 588 aaKnown RBP8.43□□□□□ -1.06
SNP1YIL061C CAB3P36076 571 aa8.43□□□□□ -1.06
SNP1YIL061C PHO88P38264 188 aaPredicted RBP8.43□□□□□ -1.06
SNP1YIL061C SLI15P38283 698 aa8.43□□□□□ -1.06
SNP1YIL061C VFA1P40080 203 aa8.43□□□□□ -1.06
SNP1YIL061C HUL4P40985 892 aa8.43□□□□□ -1.06
SNP1YIL061C ERG5P54781 538 aa8.43□□□□□ -1.06
SNP1YIL061C SEC5P89102 971 aa8.43□□□□□ -1.06
SNP1YIL061C YLH47Q06493 454 aa8.43□□□□□ -1.06
SNP1YIL061C SUB2Q07478 446 aaKnown RBP8.43□□□□□ -1.06
SNP1YIL061C TCO89Q08921 799 aa8.43□□□□□ -1.06
SNP1YIL061C NEW1Q08972 1196 aaKnown RBP8.43□□□□□ -1.06
SNP1YIL061C ARP6Q12509 438 aa8.43□□□□□ -1.06
SNP1YIL061C ILV1P00927 576 aaKnown RBP8.42□□□□□ -1.06
SNP1YIL061C PHR1P05066 565 aaKnown RBP RIP-Chip data8.42□□□□□ -1.06not detected
SNP1YIL061C STE11P23561 717 aa8.42□□□□□ -1.06
SNP1YIL061C SIP3P38717 1229 aa8.42□□□□□ -1.06
SNP1YIL061C VHR2P40041 505 aa8.42□□□□□ -1.06
SNP1YIL061C BRE2P43132 505 aa8.42□□□□□ -1.06
SNP1YIL061C APT1P49435 187 aaKnown RBP8.42□□□□□ -1.06
SNP1YIL061C GUP1P53154 560 aa8.42□□□□□ -1.06
SNP1YIL061C WHI4Q07655 649 aaKnown RBP8.42□□□□□ -1.06
SNP1YIL061C YPL216WQ08964 1102 aa8.42□□□□□ -1.06
SNP1YIL061C SFI1Q12369 946 aa8.42□□□□□ -1.06
SNP1YIL061C RAD18P10862 487 aa8.41□□□□□ -1.06
SNP1YIL061C RRP43P25359 394 aaPredicted RBP8.41□□□□□ -1.06
SNP1YIL061C RAM2P29703 316 aa8.41□□□□□ -1.06
SNP1YIL061C RPC25P35718 212 aa8.41□□□□□ -1.06
SNP1YIL061C PPS1P38148 807 aa8.41□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms