RNA–Protein interactions for RNA: YHR062C

RPP1, Transcript of Subunit of both RNase MRP and nuclear RNase P, yeast

Gene RPP1, Length 882 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPP1	YHR062C	STV1	P37296	890 aa		7.26	□□□□□ -1.25
RPP1	YHR062C	RPN10	P38886	268 aa	Known RBP	7.26	□□□□□ -1.25
RPP1	YHR062C	YFH7	P43591	353 aa		7.26	□□□□□ -1.25
RPP1	YHR062C	SEN54	Q02825	467 aa	Predicted RBP	7.26	□□□□□ -1.25
RPP1	YHR062C	WRS1	Q12109	432 aa	Known RBP	7.26	□□□□□ -1.25
RPP1	YHR062C	PSF3	Q12146	194 aa		7.26	□□□□□ -1.25
RPP1	YHR062C	SPC110	P32380	944 aa		7.25	□□□□□ -1.25
RPP1	YHR062C	ASF1	P32447	279 aa		7.25	□□□□□ -1.25
RPP1	YHR062C	SRP40	P32583	406 aa	Predicted RBP	7.25	□□□□□ -1.25
RPP1	YHR062C	PTK1	P36002	662 aa	Predicted RBP	7.25	□□□□□ -1.25
RPP1	YHR062C	AKR1	P39010	764 aa		7.25	□□□□□ -1.25
RPP1	YHR062C	FYV10	P40492	516 aa		7.25	□□□□□ -1.25
RPP1	YHR062C	RPS15	Q01855	142 aa	Known RBP	7.25	□□□□□ -1.25
RPP1	YHR062C	VMS1	Q04311	632 aa	Known RBP	7.25	□□□□□ -1.25
RPP1	YHR062C	CRF1	Q04930	467 aa		7.25	□□□□□ -1.25
RPP1	YHR062C	RGP1	P16664	663 aa		7.24	□□□□□ -1.25
RPP1	YHR062C	HCA4	P20448	770 aa	Known RBP	7.24	□□□□□ -1.25
RPP1	YHR062C	SWI4	P25302	1093 aa	Known RBP	7.24	□□□□□ -1.25
RPP1	YHR062C	MDL2	P33311	773 aa		7.24	□□□□□ -1.25
RPP1	YHR062C	MFT1	P33441	392 aa	Known RBP	7.24	□□□□□ -1.25
RPP1	YHR062C	NOC2	P39744	710 aa	Known RBP	7.24	□□□□□ -1.25
RPP1	YHR062C	UFD2	P54860	961 aa		7.24	□□□□□ -1.25
RPP1	YHR062C	WAR1	Q03631	944 aa		7.24	□□□□□ -1.25
RPP1	YHR062C	DCS2	Q12123	353 aa		7.24	□□□□□ -1.25
RPP1	YHR062C	CHO2	P05374	869 aa	Known RBP	7.23	□□□□□ -1.25
RPP1	YHR062C	HPR1	P17629	752 aa	Known RBP	7.23	□□□□□ -1.25
RPP1	YHR062C	KIP2	P28743	706 aa		7.23	□□□□□ -1.25
RPP1	YHR062C	MCM4	P30665	933 aa	Known RBP	7.23	□□□□□ -1.25
RPP1	YHR062C	MNR2	P35724	969 aa		7.23	□□□□□ -1.25
RPP1	YHR062C	BOI1	P38041	980 aa	Known RBP	7.23	□□□□□ -1.25
RPP1	YHR062C	TCD1	P38756	429 aa		7.23	□□□□□ -1.25
RPP1	YHR062C	RSC30	P38781	883 aa		7.23	□□□□□ -1.25
RPP1	YHR062C	CEP3	P40969	608 aa		7.23	□□□□□ -1.25
RPP1	YHR062C	CUE3	P53137	624 aa	Known RBP	7.23	□□□□□ -1.25
RPP1	YHR062C	SYH1	Q02875	849 aa	Known RBP	7.23	□□□□□ -1.25
RPP1	YHR062C	TFC6	Q06339	672 aa		7.23	□□□□□ -1.25
RPP1	YHR062C	ACK1	Q07622	623 aa	Predicted RBP	7.23	□□□□□ -1.25
RPP1	YHR062C	SSA4	P22202	642 aa	Known RBP	7.22	□□□□□ -1.25
RPP1	YHR062C	MAL31	P38156	614 aa		7.22	□□□□□ -1.25
RPP1	YHR062C	YGR117C	P53270	476 aa		7.22	□□□□□ -1.25
RPP1	YHR062C	HST3	P53687	447 aa		7.22	□□□□□ -1.25
RPP1	YHR062C	YML020W	Q03722	664 aa		7.22	□□□□□ -1.25
RPP1	YHR062C	GET3	Q12154	354 aa	Known RBP	7.22	□□□□□ -1.25
RPP1	YHR062C	FLO1	P32768	1537 aa		7.22	□□□□□ -1.25
RPP1	YHR062C	CDC6	P09119	513 aa		7.21	□□□□□ -1.26
RPP1	YHR062C	SNF3	P10870	884 aa		7.21	□□□□□ -1.26
RPP1	YHR062C	MCM3	P24279	971 aa	Known RBP	7.21	□□□□□ -1.26
RPP1	YHR062C	URA1	P28272	314 aa	Predicted RBP	7.21	□□□□□ -1.26
RPP1	YHR062C	BMH1	P29311	267 aa	Known RBP	7.21	□□□□□ -1.26
RPP1	YHR062C	ANP1	P32629	500 aa		7.21	□□□□□ -1.26
RPP1	YHR062C	MYO3	P36006	1272 aa		7.21	□□□□□ -1.26
RPP1	YHR062C	RTS1	P38903	757 aa		7.21	□□□□□ -1.26
RPP1	YHR062C	EMP47	P43555	445 aa		7.21	□□□□□ -1.26
RPP1	YHR062C	ALG2	P43636	503 aa		7.21	□□□□□ -1.26
RPP1	YHR062C	APL6	P46682	809 aa		7.21	□□□□□ -1.26
RPP1	YHR062C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	7.21	□□□□□ -1.26	not detected
RPP1	YHR062C	GDE1	Q02979	1223 aa		7.21	□□□□□ -1.26
RPP1	YHR062C	AFT1	P22149	690 aa		7.2	□□□□□ -1.26
RPP1	YHR062C	PSY4	P38193	441 aa		7.2	□□□□□ -1.26
RPP1	YHR062C	RXT2	P38255	430 aa		7.2	□□□□□ -1.26
RPP1	YHR062C	GUA1	P38625	525 aa	Known RBP	7.2	□□□□□ -1.26
RPP1	YHR062C	MTC3	P53077	123 aa		7.2	□□□□□ -1.26
RPP1	YHR062C	VPS75	P53853	264 aa		7.2	□□□□□ -1.26
RPP1	YHR062C	HDA1	P53973	706 aa		7.2	□□□□□ -1.26
RPP1	YHR062C	SFI1	Q12369	946 aa		7.2	□□□□□ -1.26
RPP1	YHR062C	CEX1	Q12453	761 aa		7.2	□□□□□ -1.26
RPP1	YHR062C	TOM1	Q03280	3268 aa		7.19	□□□□□ -1.26
RPP1	YHR062C	CBP1	P07252	654 aa		7.19	□□□□□ -1.26
RPP1	YHR062C	PET111	P08468	800 aa		7.19	□□□□□ -1.26
RPP1	YHR062C	VPS1	P21576	704 aa	Known RBP	7.19	□□□□□ -1.26
RPP1	YHR062C	RNR3	P21672	869 aa	Known RBP	7.19	□□□□□ -1.26
RPP1	YHR062C	GAR1	P28007	205 aa	Known RBP	7.19	□□□□□ -1.26
RPP1	YHR062C	IXR1	P33417	597 aa		7.19	□□□□□ -1.26
RPP1	YHR062C	ADE17	P38009	592 aa	Known RBP	7.19	□□□□□ -1.26
RPP1	YHR062C	UTP7	P40055	554 aa	Known RBP	7.19	□□□□□ -1.26
RPP1	YHR062C	MSH4	P40965	878 aa	Predicted RBP	7.19	□□□□□ -1.26
RPP1	YHR062C	PTK2	P47116	818 aa	Known RBP	7.19	□□□□□ -1.26
RPP1	YHR062C	VPS60	Q03390	229 aa		7.19	□□□□□ -1.26
RPP1	YHR062C	HCR1	Q05775	265 aa	Known RBP	7.19	□□□□□ -1.26
RPP1	YHR062C	MRD1	Q06106	887 aa	Known RBP	7.19	□□□□□ -1.26
RPP1	YHR062C	YCG1	Q06680	1035 aa		7.19	□□□□□ -1.26
RPP1	YHR062C	NBL1	Q3E7Y6	73 aa		7.19	□□□□□ -1.26
RPP1	YHR062C	MAK31	P23059	88 aa		7.18	□□□□□ -1.26
RPP1	YHR062C	PCI8	P40512	444 aa		7.18	□□□□□ -1.26
RPP1	YHR062C	PIP2	P52960	996 aa		7.18	□□□□□ -1.26
RPP1	YHR062C	NSG2	P53898	299 aa		7.18	□□□□□ -1.26
RPP1	YHR062C	NAF1	P53919	492 aa	Known RBP	7.18	□□□□□ -1.26
RPP1	YHR062C	GFD1	Q04839	188 aa	Known RBP	7.18	□□□□□ -1.26
RPP1	YHR062C	COG4	Q06096	861 aa		7.18	□□□□□ -1.26
RPP1	YHR062C	MMR1	Q06324	491 aa		7.18	□□□□□ -1.26
RPP1	YHR062C	QCR6	P00127	147 aa		7.17	□□□□□ -1.26
RPP1	YHR062C	PHO13	P19881	312 aa		7.17	□□□□□ -1.26
RPP1	YHR062C	SAC6	P32599	642 aa	Known RBP	7.17	□□□□□ -1.26
RPP1	YHR062C	LTV1	P34078	463 aa		7.17	□□□□□ -1.26
RPP1	YHR062C	SAP190	P36123	1033 aa		7.17	□□□□□ -1.26
RPP1	YHR062C	YHL050C	P38721	697 aa		7.17	□□□□□ -1.26
RPP1	YHR062C	PEA2	P40091	420 aa		7.17	□□□□□ -1.26
RPP1	YHR062C	RTC4	P53850	401 aa		7.17	□□□□□ -1.26
RPP1	YHR062C	MYO5	Q04439	1219 aa	Known RBP	7.17	□□□□□ -1.26
RPP1	YHR062C	TMA16	Q08687	178 aa		7.17	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms