RNA–Protein interactions for RNA: YCL051W

LRE1, Transcript of Protein involved in control of cell wall structure and stress response, yeast

Gene LRE1, Length 1,752 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LRE1	YCL051W	ATF1	P40353	525 aa		2.79	□□□□□ -1.96
LRE1	YCL051W	TNA1	P53322	534 aa		2.79	□□□□□ -1.96
LRE1	YCL051W	PEX13	P80667	386 aa		2.79	□□□□□ -1.96
LRE1	YCL051W	HOS3	Q02959	697 aa	Known RBP	2.79	□□□□□ -1.96
LRE1	YCL051W	KAR5	Q04746	504 aa		2.79	□□□□□ -1.96
LRE1	YCL051W	THO2	P53552	1597 aa	Known RBP	2.79	□□□□□ -1.96
LRE1	YCL051W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	2.79	□□□□□ -1.96	not detected
LRE1	YCL051W	GPB2	P39717	880 aa		2.79	□□□□□ -1.96
LRE1	YCL051W	YCS4	Q06156	1176 aa		2.79	□□□□□ -1.96
LRE1	YCL051W	ADD66	P36040	267 aa		2.78	□□□□□ -1.96
LRE1	YCL051W	RDH54	P38086	958 aa		2.78	□□□□□ -1.96
LRE1	YCL051W	RFC5	P38251	354 aa		2.78	□□□□□ -1.96
LRE1	YCL051W	DMA2	P53924	522 aa		2.78	□□□□□ -1.96
LRE1	YCL051W	NOC3	Q07896	663 aa	Predicted RBP	2.78	□□□□□ -1.96
LRE1	YCL051W	HMI1	Q12039	706 aa		2.78	□□□□□ -1.96
LRE1	YCL051W	ECM5	Q03214	1411 aa		2.78	□□□□□ -1.96
LRE1	YCL051W	MDS3	P53094	1487 aa		2.78	□□□□□ -1.97
LRE1	YCL051W	HIR3	P47171	1648 aa		2.77	□□□□□ -1.97
LRE1	YCL051W	EMC1	P25574	760 aa		2.77	□□□□□ -1.97
LRE1	YCL051W	BUD4	P47136	1447 aa		2.77	□□□□□ -1.97
LRE1	YCL051W	AFG2	P32794	780 aa		2.77	□□□□□ -1.97
LRE1	YCL051W	UBA2	P52488	636 aa		2.77	□□□□□ -1.97
LRE1	YCL051W	GPI13	Q07830	1017 aa		2.77	□□□□□ -1.97
LRE1	YCL051W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	2.77	□□□□□ -1.97	not detected
LRE1	YCL051W	SIP5	P40210	489 aa	Known RBP	2.76	□□□□□ -1.97
LRE1	YCL051W	GCV2	P49095	1034 aa		2.76	□□□□□ -1.97
LRE1	YCL051W	GTF1	P53260	183 aa	Predicted RBP	2.76	□□□□□ -1.97
LRE1	YCL051W	HEM13	P11353	328 aa	Known RBP	2.75	□□□□□ -1.97
LRE1	YCL051W	UGA4	P32837	571 aa		2.75	□□□□□ -1.97
LRE1	YCL051W	RPN3	P40016	523 aa	Known RBP	2.75	□□□□□ -1.97
LRE1	YCL051W	NOP12	Q08208	459 aa	Known RBP	2.75	□□□□□ -1.97
LRE1	YCL051W	PLB1	P39105	664 aa		2.74	□□□□□ -1.97
LRE1	YCL051W	LGE1	Q02796	332 aa	Known RBP	2.74	□□□□□ -1.97
LRE1	YCL051W	SIZ1	Q04195	904 aa		2.74	□□□□□ -1.97
LRE1	YCL051W	PEX28	P38848	579 aa		2.74	□□□□□ -1.97
LRE1	YCL051W	RSM26	P47141	266 aa		2.74	□□□□□ -1.97
LRE1	YCL051W	PTC5	Q12511	572 aa		2.74	□□□□□ -1.97
LRE1	YCL051W	TRL1	P09880	827 aa	Known RBP	2.73	□□□□□ -1.97
LRE1	YCL051W	KIN2	P13186	1147 aa	Known RBP	2.73	□□□□□ -1.97
LRE1	YCL051W	HRR25	P29295	494 aa	Known RBP	2.73	□□□□□ -1.97
LRE1	YCL051W	QRI1	P43123	477 aa	Known RBP	2.73	□□□□□ -1.97
LRE1	YCL051W	YFL054C	P43549	646 aa		2.73	□□□□□ -1.97
LRE1	YCL051W	SAM37	P50110	327 aa		2.73	□□□□□ -1.97
LRE1	YCL051W	YGL140C	P53120	1219 aa		2.72	□□□□□ -1.97
LRE1	YCL051W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	2.72	□□□□□ -1.97	not detected
LRE1	YCL051W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	2.72	□□□□□ -1.97	not detected
LRE1	YCL051W	ULP1	Q02724	621 aa		2.72	□□□□□ -1.97
LRE1	YCL051W	EST2	Q06163	884 aa		2.72	□□□□□ -1.97
LRE1	YCL051W	SVS1	Q12254	260 aa		2.72	□□□□□ -1.97
LRE1	YCL051W	APL1	P27351	700 aa		2.72	□□□□□ -1.97
LRE1	YCL051W	PRP40	P33203	583 aa	Known RBP	2.72	□□□□□ -1.97
LRE1	YCL051W	SQT1	P35184	431 aa		2.72	□□□□□ -1.97
LRE1	YCL051W	CUE2	P36075	443 aa	Known RBP	2.72	□□□□□ -1.97
LRE1	YCL051W	CIC1	P38779	376 aa	Known RBP	2.72	□□□□□ -1.97
LRE1	YCL051W	DAK2	P43550	591 aa		2.72	□□□□□ -1.97
LRE1	YCL051W	AIM39	Q08223	395 aa		2.72	□□□□□ -1.97
LRE1	YCL051W	REV3	P14284	1504 aa		2.71	□□□□□ -1.97
LRE1	YCL051W	BPT1	P14772	1559 aa		2.71	□□□□□ -1.98
LRE1	YCL051W	ATG2	P53855	1592 aa		2.71	□□□□□ -1.98
LRE1	YCL051W	XRN1	P22147	1528 aa	Known RBP	2.71	□□□□□ -1.98
LRE1	YCL051W	ALG3	P38179	458 aa		2.71	□□□□□ -1.98
LRE1	YCL051W	IOC3	P43596	787 aa		2.71	□□□□□ -1.98
LRE1	YCL051W	EXG2	P52911	562 aa		2.71	□□□□□ -1.98
LRE1	YCL051W	YPL260W	Q08977	551 aa		2.71	□□□□□ -1.98
LRE1	YCL051W	FRT1	Q99332	602 aa		2.71	□□□□□ -1.98
LRE1	YCL051W	PEP1	P32319	1579 aa		2.7	□□□□□ -1.98
LRE1	YCL051W	MSC2	Q03455	724 aa		2.7	□□□□□ -1.98
LRE1	YCL051W	PFK1	P16861	987 aa	Known RBP	2.69	□□□□□ -1.98
LRE1	YCL051W	TMN2	Q04562	672 aa		2.69	□□□□□ -1.98
LRE1	YCL051W	SEC23	P15303	768 aa	Known RBP	2.69	□□□□□ -1.98
LRE1	YCL051W	KAR2	P16474	682 aa	Known RBP	2.68	□□□□□ -1.98
LRE1	YCL051W	MDJ2	P42834	146 aa		2.68	□□□□□ -1.98
LRE1	YCL051W	MET12	P46151	657 aa		2.68	□□□□□ -1.98
LRE1	YCL051W	STU2	P46675	888 aa		2.68	□□□□□ -1.98
LRE1	YCL051W	ATG13	Q06628	738 aa		2.68	□□□□□ -1.98
LRE1	YCL051W	SUB2	Q07478	446 aa	Known RBP	2.68	□□□□□ -1.98
LRE1	YCL051W	ADY3	Q07732	790 aa		2.68	□□□□□ -1.98
LRE1	YCL051W	TPO1	Q07824	586 aa		2.68	□□□□□ -1.98
LRE1	YCL051W	MND2	P40577	368 aa		2.67	□□□□□ -1.98
LRE1	YCL051W	DAL4	Q04895	635 aa		2.67	□□□□□ -1.98
LRE1	YCL051W	NUT2	Q06213	157 aa		2.67	□□□□□ -1.98
LRE1	YCL051W	PEP7	P32609	515 aa		2.66	□□□□□ -1.98
LRE1	YCL051W	GRS1	P38088	690 aa	Known RBP	2.66	□□□□□ -1.98
LRE1	YCL051W	CHA4	P43634	648 aa		2.66	□□□□□ -1.98
LRE1	YCL051W	YLR040C	Q07988	224 aa		2.66	□□□□□ -1.98
LRE1	YCL051W	YCF1	P39109	1515 aa	Known RBP	2.66	□□□□□ -1.98
LRE1	YCL051W	DED1	P06634	604 aa	Known RBP	2.66	□□□□□ -1.98
LRE1	YCL051W	HIS5	P07172	385 aa		2.66	□□□□□ -1.98
LRE1	YCL051W	NOP2	P40991	618 aa	Known RBP	2.66	□□□□□ -1.98
LRE1	YCL051W	ADI1	Q03677	179 aa		2.66	□□□□□ -1.98
LRE1	YCL051W	IRC10	Q08118	586 aa		2.66	□□□□□ -1.98
LRE1	YCL051W	YOL073C	Q08232	322 aa		2.66	□□□□□ -1.98
LRE1	YCL051W	MCH5	Q08777	521 aa		2.66	□□□□□ -1.98
LRE1	YCL051W	LAS17	Q12446	633 aa		2.66	□□□□□ -1.98
LRE1	YCL051W	KCS1	Q12494	1050 aa		2.66	□□□□□ -1.98
LRE1	YCL051W	SSK2	P53599	1579 aa		2.65	□□□□□ -1.98
LRE1	YCL051W	BUL1	P48524	976 aa		2.65	□□□□□ -1.99
LRE1	YCL051W	TOS4	Q06266	489 aa		2.65	□□□□□ -1.99
LRE1	YCL051W	NDJ1	Q12366	352 aa		2.65	□□□□□ -1.99
LRE1	YCL051W	YER152C	P10356	443 aa		2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms