RNA–Protein interactions for RNA: ENST00000472800.1

AUP1-207, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

TSL 4

Gene AUP1, Length 663 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-207ENST00000472800 NISCHQ9Y2I1 1504 aa46.89■■■■■ 5.1
AUP1-207ENST00000472800 CCDC180Q9P1Z9 1646 aa41.47■■■■■ 4.23
AUP1-207ENST00000472800 ABCC9O60706 1549 aa41.17■■■■■ 4.18
AUP1-207ENST00000472800 ZCCHC6Q5VYS8 1495 aaKnown RBP39.12■■■■□ 3.85
AUP1-207ENST00000472800 RB1CC1Q8TDY2 1594 aa39.05■■■■□ 3.84
AUP1-207ENST00000472800 DCAF8L2P0C7V8 631 aa39.05■■■■□ 3.84
AUP1-207ENST00000472800 NACADO15069 1562 aa38.96■■■■□ 3.83
AUP1-207ENST00000472800 MYO15BQ96JP2 1530 aa38.92■■■■□ 3.82
AUP1-207ENST00000472800 DCAF1Q9Y4B6 1507 aa38.88■■■■□ 3.81
AUP1-207ENST00000472800 DNAJC5BQ9UF47 199 aa38.83■■■■□ 3.81
AUP1-207ENST00000472800 PABPN1Q86U42 306 aaKnown RBP eCLIP38.34■■■■□ 3.73
AUP1-207ENST00000472800 UNC13AQ9UPW8 1703 aa38.09■■■■□ 3.69
AUP1-207ENST00000472800 BICRAQ9NZM4 1560 aa37.91■■■■□ 3.66
AUP1-207ENST00000472800 SCRIBQ14160 1630 aa37.8■■■■□ 3.64
AUP1-207ENST00000472800 SHROOM4Q9ULL8 1493 aa37.39■■■■□ 3.58
AUP1-207ENST00000472800 CC2D2AQ9P2K1 1620 aa37.14■■■■□ 3.54
AUP1-207ENST00000472800 CECR2Q9BXF3 1484 aa37.1■■■■□ 3.53
AUP1-207ENST00000472800 EIF4G1Q04637 1599 aaKnown RBP37■■■■□ 3.51
AUP1-207ENST00000472800 BAZ1AQ9NRL2 1556 aaPredicted RBP36.32■■■■□ 3.41
AUP1-207ENST00000472800 SMARCA4P51532 1647 aa36.25■■■■□ 3.39
AUP1-207ENST00000472800 MROH2BQ7Z745 1585 aa36.1■■■■□ 3.37
AUP1-207ENST00000472800 ATAD2BQ9ULI0 1458 aa36.01■■■■□ 3.36
AUP1-207ENST00000472800 SMARCA2P51531 1590 aa36■■■■□ 3.35
AUP1-207ENST00000472800 NCAPD3P42695 1498 aa35.99■■■■□ 3.35
AUP1-207ENST00000472800 PEG3Q9GZU2 1588 aa35.94■■■■□ 3.34
AUP1-207ENST00000472800 RSF1Q96T23 1441 aaPredicted RBP35.9■■■■□ 3.34
AUP1-207ENST00000472800 DNAJC5Q9H3Z4 198 aa35.81■■■■□ 3.32
AUP1-207ENST00000472800 HMGXB3Q12766 1538 aa35.78■■■■□ 3.32
AUP1-207ENST00000472800 BAZ1BQ9UIG0 1483 aaKnown RBP35.72■■■■□ 3.31
AUP1-207ENST00000472800 WIZO95785 1651 aa35.69■■■■□ 3.3
AUP1-207ENST00000472800 ERCC6Q03468 1493 aa35.57■■■■□ 3.28
AUP1-207ENST00000472800 CUX2O14529 1486 aa35.54■■■■□ 3.28
AUP1-207ENST00000472800 TOP2AP11388 1531 aaKnown RBP35.39■■■■□ 3.26
AUP1-207ENST00000472800 SUPT5HO00267 1087 aaKnown RBP35.3■■■■□ 3.24
AUP1-207ENST00000472800 NESP48681 1621 aa35.29■■■■□ 3.24
AUP1-207ENST00000472800 CCDC88BA6NC98 1476 aa35.01■■■■□ 3.19
AUP1-207ENST00000472800 LAMC3Q9Y6N6 1575 aa34.98■■■■□ 3.19
AUP1-207ENST00000472800 CADPSQ9ULU8 1353 aa34.96■■■■□ 3.19
AUP1-207ENST00000472800 THOC2Q8NI27 1593 aaKnown RBP34.92■■■■□ 3.18
AUP1-207ENST00000472800 PDS5BQ9NTI5 1447 aa34.83■■■■□ 3.17
AUP1-207ENST00000472800 CFTRP13569 1480 aa34.81■■■■□ 3.16
AUP1-207ENST00000472800 KIF21AQ7Z4S6 1674 aa34.78■■■■□ 3.16
AUP1-207ENST00000472800 MRC2Q9UBG0 1479 aa34.52■■■■□ 3.12
AUP1-207ENST00000472800 FANCD2Q9BXW9 1451 aa34.49■■■■□ 3.11
AUP1-207ENST00000472800 PRDM2Q13029 1718 aa34.44■■■■□ 3.1
AUP1-207ENST00000472800 WDR62O43379 1518 aa34.41■■■■□ 3.1
AUP1-207ENST00000472800 CEP164Q9UPV0 1460 aa34.4■■■■□ 3.1
AUP1-207ENST00000472800 TRIM41Q8WV44 630 aa34.19■■■■□ 3.06
AUP1-207ENST00000472800 ABCC8Q09428 1581 aa34.1■■■■□ 3.05
AUP1-207ENST00000472800 URB2Q14146 1524 aaKnown RBP34.08■■■■□ 3.05
AUP1-207ENST00000472800 TOPBP1Q92547 1522 aa33.98■■■■□ 3.03
AUP1-207ENST00000472800 DNMBPQ6XZF7 1577 aa33.96■■■■□ 3.03
AUP1-207ENST00000472800 OSCARQ8IYS5 282 aa33.95■■■■□ 3.03
AUP1-207ENST00000472800 CUX1P39880 1505 aa33.84■■■■□ 3.01
AUP1-207ENST00000472800 WRNQ14191 1432 aaPredicted RBP eCLIP33.84■■■■□ 3.01
AUP1-207ENST00000472800 POLA1P09884 1462 aaPredicted RBP33.71■■■□□ 2.99
AUP1-207ENST00000472800 IFT140Q96RY7 1462 aa33.7■■■□□ 2.99
AUP1-207ENST00000472800 TOP2BQ02880 1626 aa33.68■■■□□ 2.98
AUP1-207ENST00000472800 FGD5Q6ZNL6 1462 aa33.68■■■□□ 2.98
AUP1-207ENST00000472800 SOGA1O94964 1423 aa33.65■■■□□ 2.98
AUP1-207ENST00000472800 BIVM-ERCC5R4GMW8 1640 aa33.64■■■□□ 2.98
AUP1-207ENST00000472800 ZNF608Q9ULD9 1512 aaPredicted RBP33.64■■■□□ 2.98
AUP1-207ENST00000472800 SYNJ1O43426 1573 aa33.63■■■□□ 2.97
AUP1-207ENST00000472800 TARBP1Q13395 1621 aaKnown RBP33.54■■■□□ 2.96
AUP1-207ENST00000472800 RAD54L2Q9Y4B4 1467 aa33.54■■■□□ 2.96
AUP1-207ENST00000472800 RIMBP3CA6NJZ7 1639 aa33.46■■■□□ 2.95
AUP1-207ENST00000472800 RIMBP3BA6NNM3 1639 aa33.46■■■□□ 2.95
AUP1-207ENST00000472800 RIMBP3Q9UFD9 1639 aa33.46■■■□□ 2.95
AUP1-207ENST00000472800 ABCA10Q8WWZ4 1543 aa33.42■■■□□ 2.94
AUP1-207ENST00000472800 EIF4G3O43432 1585 aaKnown RBP33.41■■■□□ 2.94
AUP1-207ENST00000472800 WDR97A6NE52 1622 aa33.38■■■□□ 2.93
AUP1-207ENST00000472800 TDRD9Q8NDG6 1382 aaKnown RBP33.36■■■□□ 2.93
AUP1-207ENST00000472800 AQRO60306 1485 aaKnown RBP eCLIP33.35■■■□□ 2.933e-17■■■■■ 59.6
AUP1-207ENST00000472800 ARHGEF11O15085 1522 aa33.33■■■□□ 2.93
AUP1-207ENST00000472800 GAPVD1Q14C86 1478 aa33.24■■■□□ 2.91
AUP1-207ENST00000472800 FBLN2P98095 1184 aa33.22■■■□□ 2.91
AUP1-207ENST00000472800 CHIC1Q5VXU3 224 aa33.22■■■□□ 2.91
AUP1-207ENST00000472800 CHD1O14646 1710 aa33.19■■■□□ 2.9
AUP1-207ENST00000472800 GRIN2BQ13224 1484 aa33.18■■■□□ 2.9
AUP1-207ENST00000472800 CYB5RLQ6IPT4 315 aa33.18■■■□□ 2.9
AUP1-207ENST00000472800 ABCA5Q8WWZ7 1642 aa33.17■■■□□ 2.9
AUP1-207ENST00000472800 KIF27Q86VH2 1401 aa33.13■■■□□ 2.89
AUP1-207ENST00000472800 MAGI1Q96QZ7 1491 aaPredicted RBP33.05■■■□□ 2.88
AUP1-207ENST00000472800 ERICH3Q5RHP9 1530 aa33.03■■■□□ 2.88
AUP1-207ENST00000472800 SNAPC4Q5SXM2 1469 aa33.02■■■□□ 2.88
AUP1-207ENST00000472800 PBRM1Q86U86 1689 aa33.01■■■□□ 2.88
AUP1-207ENST00000472800 ARAP1Q96P48 1450 aa33■■■□□ 2.87
AUP1-207ENST00000472800 IGF1RP08069 1367 aa32.96■■■□□ 2.87
AUP1-207ENST00000472800 CHMP7Q8WUX9 453 aaPredicted RBP32.93■■■□□ 2.86
AUP1-207ENST00000472800 SYNJ2O15056 1496 aa32.92■■■□□ 2.86
AUP1-207ENST00000472800 TRHP20396 242 aaPredicted RBP32.9■■■□□ 2.86
AUP1-207ENST00000472800 FHAD1B1AJZ9 1412 aa32.89■■■□□ 2.86
AUP1-207ENST00000472800 RUSC2Q8N2Y8 1516 aa32.86■■■□□ 2.85
AUP1-207ENST00000472800 ADAMTS12P58397 1594 aa32.82■■■□□ 2.84
AUP1-207ENST00000472800 CLASP1Q7Z460 1538 aa32.82■■■□□ 2.84
AUP1-207ENST00000472800 EEA1Q15075 1411 aa32.81■■■□□ 2.84
AUP1-207ENST00000472800 CARMIL1Q5VZK9 1371 aa32.77■■■□□ 2.84
AUP1-207ENST00000472800 CUL7Q14999 1698 aa32.76■■■□□ 2.84
AUP1-207ENST00000472800 CSRNP3Q8WYN3 585 aa32.72■■■□□ 2.83
AUP1-207ENST00000472800 GRIN2AQ12879 1464 aa32.72■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms