RNA–Protein interactions for RNA: ENST00000544868.2

MALAT1-203, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 480 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-203ENST00000544868 AEBP2Q6ZN18 517 aaPredicted RBP24.45■■□□□ 1.5
MALAT1-203ENST00000544868 CHIC1Q5VXU3 224 aa23.97■■□□□ 1.43
MALAT1-203ENST00000544868 DNAJC5BQ9UF47 199 aa21.33■■□□□ 1.01
MALAT1-203ENST00000544868 ABCC9O60706 1549 aa21.32■■□□□ 1
MALAT1-203ENST00000544868 NISCHQ9Y2I1 1504 aa21.3■■□□□ 1
MALAT1-203ENST00000544868 PHF23Q9BUL5 403 aaPredicted RBP21.02■□□□□ 0.96
MALAT1-203ENST00000544868 SENP3Q9H4L4 574 aaPredicted RBP20.85■□□□□ 0.93
MALAT1-203ENST00000544868 DNAJC5Q9H3Z4 198 aa20.72■□□□□ 0.91
MALAT1-203ENST00000544868 POTEDQ86YR6 584 aa20.41■□□□□ 0.86
MALAT1-203ENST00000544868 CCDC180Q9P1Z9 1646 aa19.82■□□□□ 0.76
MALAT1-203ENST00000544868 RB1CC1Q8TDY2 1594 aa19.61■□□□□ 0.73
MALAT1-203ENST00000544868 PABPN1Q86U42 306 aaKnown RBP eCLIP19.57■□□□□ 0.72
MALAT1-203ENST00000544868 PLPPR3Q6T4P5 718 aa19.52■□□□□ 0.72
MALAT1-203ENST00000544868 CECR2Q9BXF3 1484 aa19.37■□□□□ 0.69
MALAT1-203ENST00000544868 FOXD1Q16676 465 aa19.28■□□□□ 0.68
MALAT1-203ENST00000544868 TRIM41Q8WV44 630 aa19.2■□□□□ 0.66
MALAT1-203ENST00000544868 CC2D2AQ9P2K1 1620 aa19.18■□□□□ 0.66
MALAT1-203ENST00000544868 UNC13AQ9UPW8 1703 aa19.17■□□□□ 0.66
MALAT1-203ENST00000544868 BICRAQ9NZM4 1560 aa19.09■□□□□ 0.65
MALAT1-203ENST00000544868 NACADO15069 1562 aa19.08■□□□□ 0.65
MALAT1-203ENST00000544868 CUX2O14529 1486 aa19.02■□□□□ 0.63
MALAT1-203ENST00000544868 EIF4G1Q04637 1599 aaKnown RBP18.76■□□□□ 0.59
MALAT1-203ENST00000544868 SHROOM4Q9ULL8 1493 aa18.68■□□□□ 0.58
MALAT1-203ENST00000544868 DCAF8L2P0C7V8 631 aa18.62■□□□□ 0.57
MALAT1-203ENST00000544868 ADRA2BP18089 450 aa18.54■□□□□ 0.56
MALAT1-203ENST00000544868 ERCC6Q03468 1493 aa18.53■□□□□ 0.56
MALAT1-203ENST00000544868 PPP6R1Q9UPN7 881 aa18.53■□□□□ 0.56
MALAT1-203ENST00000544868 MYO15BQ96JP2 1530 aa18.3■□□□□ 0.52
MALAT1-203ENST00000544868 PIAS4Q8N2W9 510 aaPredicted RBP18.23■□□□□ 0.51
MALAT1-203ENST00000544868 MSH5O43196 834 aa18.14■□□□□ 0.49
MALAT1-203ENST00000544868 ILDR1Q86SU0 546 aaPredicted RBP18.04■□□□□ 0.48
MALAT1-203ENST00000544868 THOC2Q8NI27 1593 aaKnown RBP18.03■□□□□ 0.48
MALAT1-203ENST00000544868 SCRIBQ14160 1630 aa18.01■□□□□ 0.47
MALAT1-203ENST00000544868 NESP48681 1621 aa17.87■□□□□ 0.45
MALAT1-203ENST00000544868 TRHP20396 242 aaPredicted RBP17.86■□□□□ 0.45
MALAT1-203ENST00000544868 BAZ1AQ9NRL2 1556 aaPredicted RBP17.86■□□□□ 0.45
MALAT1-203ENST00000544868 OSCARQ8IYS5 282 aa17.84■□□□□ 0.45
MALAT1-203ENST00000544868 RIMBP3CA6NJZ7 1639 aa17.83■□□□□ 0.45
MALAT1-203ENST00000544868 RIMBP3BA6NNM3 1639 aa17.83■□□□□ 0.45
MALAT1-203ENST00000544868 RIMBP3Q9UFD9 1639 aa17.83■□□□□ 0.45
MALAT1-203ENST00000544868 SMARCA2P51531 1590 aa17.76■□□□□ 0.43
MALAT1-203ENST00000544868 NCAPD3P42695 1498 aa17.63■□□□□ 0.41
MALAT1-203ENST00000544868 ARHGEF11O15085 1522 aa17.62■□□□□ 0.41
MALAT1-203ENST00000544868 KIF21AQ7Z4S6 1674 aa17.61■□□□□ 0.41
MALAT1-203ENST00000544868 CYB5RLQ6IPT4 315 aa17.54■□□□□ 0.4
MALAT1-203ENST00000544868 LAMC3Q9Y6N6 1575 aa17.49■□□□□ 0.39
MALAT1-203ENST00000544868 DCAF1Q9Y4B6 1507 aa17.49■□□□□ 0.39
MALAT1-203ENST00000544868 PDS5BQ9NTI5 1447 aa17.43■□□□□ 0.38
MALAT1-203ENST00000544868 WDR62O43379 1518 aa17.42■□□□□ 0.38
MALAT1-203ENST00000544868 MRC2Q9UBG0 1479 aa17.4■□□□□ 0.38
MALAT1-203ENST00000544868 HMGXB3Q12766 1538 aa17.38■□□□□ 0.37
MALAT1-203ENST00000544868 ATAD2BQ9ULI0 1458 aa17.36■□□□□ 0.37
MALAT1-203ENST00000544868 ZCCHC6Q5VYS8 1495 aaKnown RBP17.34■□□□□ 0.37
MALAT1-203ENST00000544868 ARAP1Q96P48 1450 aa17.33■□□□□ 0.37
MALAT1-203ENST00000544868 PPP4R3CPQ6ZMV5 832 aa17.17■□□□□ 0.34
MALAT1-203ENST00000544868 BAZ1BQ9UIG0 1483 aaKnown RBP17.12■□□□□ 0.33
MALAT1-203ENST00000544868 SCAF1Q9H7N4 1312 aaKnown RBP17.08■□□□□ 0.32
MALAT1-203ENST00000544868 LMTK3Q96Q04 1460 aa17.05■□□□□ 0.32
MALAT1-203ENST00000544868 RSF1Q96T23 1441 aaPredicted RBP17.02■□□□□ 0.31
MALAT1-203ENST00000544868 CEP164Q9UPV0 1460 aa17.01■□□□□ 0.31
MALAT1-203ENST00000544868 CADPSQ9ULU8 1353 aa17.01■□□□□ 0.31
MALAT1-203ENST00000544868 FBXO41Q8TF61 875 aa16.98■□□□□ 0.31
MALAT1-203ENST00000544868 SMARCA4P51532 1647 aa16.97■□□□□ 0.31
MALAT1-203ENST00000544868 KDM4FA0A1W2PPD8 638 aa16.96■□□□□ 0.31
MALAT1-203ENST00000544868 SOCS7O14512 581 aa16.96■□□□□ 0.31
MALAT1-203ENST00000544868 ERCC6L2Q5T890 1561 aa16.94■□□□□ 0.3
MALAT1-203ENST00000544868 CHD1O14646 1710 aa16.87■□□□□ 0.29
MALAT1-203ENST00000544868 ZNF608Q9ULD9 1512 aaPredicted RBP16.86■□□□□ 0.29
MALAT1-203ENST00000544868 FANCD2Q9BXW9 1451 aa16.85■□□□□ 0.29
MALAT1-203ENST00000544868 PEG3Q9GZU2 1588 aa16.81■□□□□ 0.28
MALAT1-203ENST00000544868 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
MALAT1-203ENST00000544868 MAPK8IP2Q13387 824 aaPredicted RBP16.79■□□□□ 0.28
MALAT1-203ENST00000544868 NCBP3Q53F19 620 aaKnown RBP16.79■□□□□ 0.28
MALAT1-203ENST00000544868 ILDR2Q71H61 639 aa16.79■□□□□ 0.28
MALAT1-203ENST00000544868 HECW2Q9P2P5 1572 aa16.79■□□□□ 0.28
MALAT1-203ENST00000544868 KCNA4P22459 653 aa16.75■□□□□ 0.27
MALAT1-203ENST00000544868 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
MALAT1-203ENST00000544868 CNKSR2Q8WXI2 1034 aa16.71■□□□□ 0.27
MALAT1-203ENST00000544868 EIF4G3O43432 1585 aaKnown RBP16.71■□□□□ 0.27
MALAT1-203ENST00000544868 FBLN2P98095 1184 aa16.69■□□□□ 0.26
MALAT1-203ENST00000544868 CLASP1Q7Z460 1538 aa16.64■□□□□ 0.25
MALAT1-203ENST00000544868 KIF13AQ9H1H9 1805 aa16.63■□□□□ 0.25
MALAT1-203ENST00000544868 DMRT2Q9Y5R5 561 aa16.62■□□□□ 0.25
MALAT1-203ENST00000544868 DISP3Q9P2K9 1392 aa16.62■□□□□ 0.25
MALAT1-203ENST00000544868 GAPVD1Q14C86 1478 aa16.59■□□□□ 0.25
MALAT1-203ENST00000544868 SYNJ2O15056 1496 aa16.56■□□□□ 0.24
MALAT1-203ENST00000544868 ADGRL1O94910 1474 aa16.51■□□□□ 0.23
MALAT1-203ENST00000544868 CFTRP13569 1480 aa16.5■□□□□ 0.23
MALAT1-203ENST00000544868 KDM6BO15054 1643 aa16.5■□□□□ 0.23
MALAT1-203ENST00000544868 AQRO60306 1485 aaKnown RBP eCLIP16.49■□□□□ 0.23
MALAT1-203ENST00000544868 CACNB1Q02641 598 aaPredicted RBP16.49■□□□□ 0.23
MALAT1-203ENST00000544868 SYNJ1O43426 1573 aa16.48■□□□□ 0.23
MALAT1-203ENST00000544868 NPM3O75607 178 aaKnown RBP16.46■□□□□ 0.23
MALAT1-203ENST00000544868 MROH2BQ7Z745 1585 aa16.4■□□□□ 0.22
MALAT1-203ENST00000544868 RNF216Q9NWF9 866 aaPredicted RBP16.37■□□□□ 0.21
MALAT1-203ENST00000544868 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
MALAT1-203ENST00000544868 SPATA31D1Q6ZQQ2 1576 aa16.34■□□□□ 0.21
MALAT1-203ENST00000544868 FAM69CQ0P6D2 419 aa16.33■□□□□ 0.2
MALAT1-203ENST00000544868 TARBP1Q13395 1621 aaKnown RBP16.33■□□□□ 0.2
MALAT1-203ENST00000544868 SNAPC4Q5SXM2 1469 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms