RNA–Protein interactions for RNA: ENST00000525607.5

FDFT1-207, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 1,773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-207ENST00000525607 NISCHQ9Y2I1 1504 aa44.73■■■■■ 4.75
FDFT1-207ENST00000525607 CCDC180Q9P1Z9 1646 aa39.46■■■■□ 3.91
FDFT1-207ENST00000525607 ABCC9O60706 1549 aa38.12■■■■□ 3.69
FDFT1-207ENST00000525607 ZCCHC6Q5VYS8 1495 aaKnown RBP37.41■■■■□ 3.58
FDFT1-207ENST00000525607 DCAF8L2P0C7V8 631 aa37.19■■■■□ 3.54
FDFT1-207ENST00000525607 DCAF1Q9Y4B6 1507 aa36.97■■■■□ 3.51
FDFT1-207ENST00000525607 NACADO15069 1562 aa36.94■■■■□ 3.5
FDFT1-207ENST00000525607 MYO15BQ96JP2 1530 aa36.87■■■■□ 3.49
FDFT1-207ENST00000525607 RB1CC1Q8TDY2 1594 aa36.85■■■■□ 3.49
FDFT1-207ENST00000525607 SCRIBQ14160 1630 aa36.17■■■■□ 3.38
FDFT1-207ENST00000525607 UNC13AQ9UPW8 1703 aa36.12■■■■□ 3.37
FDFT1-207ENST00000525607 SHROOM4Q9ULL8 1493 aa35.85■■■■□ 3.33
FDFT1-207ENST00000525607 BICRAQ9NZM4 1560 aa35.77■■■■□ 3.32
FDFT1-207ENST00000525607 PABPN1Q86U42 306 aaKnown RBP eCLIP35.74■■■■□ 3.31
FDFT1-207ENST00000525607 CECR2Q9BXF3 1484 aa34.84■■■■□ 3.17
FDFT1-207ENST00000525607 EIF4G1Q04637 1599 aaKnown RBP34.77■■■■□ 3.16
FDFT1-207ENST00000525607 BAZ1AQ9NRL2 1556 aaPredicted RBP34.61■■■■□ 3.13
FDFT1-207ENST00000525607 SMARCA4P51532 1647 aa34.6■■■■□ 3.13
FDFT1-207ENST00000525607 MROH2BQ7Z745 1585 aa34.53■■■■□ 3.12
FDFT1-207ENST00000525607 CC2D2AQ9P2K1 1620 aa34.49■■■■□ 3.11
FDFT1-207ENST00000525607 DNAJC5BQ9UF47 199 aa34.43■■■■□ 3.1
FDFT1-207ENST00000525607 RSF1Q96T23 1441 aaPredicted RBP34.33■■■■□ 3.09
FDFT1-207ENST00000525607 ATAD2BQ9ULI0 1458 aa34.24■■■■□ 3.07
FDFT1-207ENST00000525607 WIZO95785 1651 aa34.22■■■■□ 3.07
FDFT1-207ENST00000525607 PEG3Q9GZU2 1588 aa34.2■■■■□ 3.07
FDFT1-207ENST00000525607 SMARCA2P51531 1590 aa34.19■■■■□ 3.06
FDFT1-207ENST00000525607 NCAPD3P42695 1498 aa34.08■■■■□ 3.05
FDFT1-207ENST00000525607 BAZ1BQ9UIG0 1483 aaKnown RBP33.99■■■■□ 3.03
FDFT1-207ENST00000525607 SUPT5HO00267 1087 aaKnown RBP33.99■■■■□ 3.03
FDFT1-207ENST00000525607 HMGXB3Q12766 1538 aa33.99■■■■□ 3.03
FDFT1-207ENST00000525607 TOP2AP11388 1531 aaKnown RBP33.83■■■■□ 3.01
FDFT1-207ENST00000525607 CCDC88BA6NC98 1476 aa33.45■■■□□ 2.95
FDFT1-207ENST00000525607 NESP48681 1621 aa33.19■■■□□ 2.9
FDFT1-207ENST00000525607 CADPSQ9ULU8 1353 aa33.14■■■□□ 2.9
FDFT1-207ENST00000525607 LAMC3Q9Y6N6 1575 aa33.1■■■□□ 2.89
FDFT1-207ENST00000525607 CFTRP13569 1480 aa33.08■■■□□ 2.89
FDFT1-207ENST00000525607 PRDM2Q13029 1718 aa32.91■■■□□ 2.86
FDFT1-207ENST00000525607 PDS5BQ9NTI5 1447 aa32.84■■■□□ 2.85
FDFT1-207ENST00000525607 KIF21AQ7Z4S6 1674 aa32.81■■■□□ 2.84
FDFT1-207ENST00000525607 FANCD2Q9BXW9 1451 aa32.8■■■□□ 2.84
FDFT1-207ENST00000525607 ERCC6Q03468 1493 aa32.77■■■□□ 2.84
FDFT1-207ENST00000525607 CEP164Q9UPV0 1460 aa32.69■■■□□ 2.82
FDFT1-207ENST00000525607 THOC2Q8NI27 1593 aaKnown RBP32.52■■■□□ 2.8
FDFT1-207ENST00000525607 MRC2Q9UBG0 1479 aa32.5■■■□□ 2.79
FDFT1-207ENST00000525607 ABCC8Q09428 1581 aa32.49■■■□□ 2.79
FDFT1-207ENST00000525607 URB2Q14146 1524 aaKnown RBP32.45■■■□□ 2.79
FDFT1-207ENST00000525607 WDR62O43379 1518 aa32.39■■■□□ 2.78
FDFT1-207ENST00000525607 CUX1P39880 1505 aa32.36■■■□□ 2.77
FDFT1-207ENST00000525607 WRNQ14191 1432 aaPredicted RBP eCLIP32.35■■■□□ 2.77
FDFT1-207ENST00000525607 TOPBP1Q92547 1522 aa32.35■■■□□ 2.77
FDFT1-207ENST00000525607 DNMBPQ6XZF7 1577 aa32.34■■■□□ 2.77
FDFT1-207ENST00000525607 SYNJ1O43426 1573 aa32.29■■■□□ 2.76
FDFT1-207ENST00000525607 TOP2BQ02880 1626 aa32.21■■■□□ 2.75
FDFT1-207ENST00000525607 BIVM-ERCC5R4GMW8 1640 aa32.21■■■□□ 2.75
FDFT1-207ENST00000525607 FGD5Q6ZNL6 1462 aa32.14■■■□□ 2.74
FDFT1-207ENST00000525607 CUX2O14529 1486 aa32.13■■■□□ 2.73
FDFT1-207ENST00000525607 POLA1P09884 1462 aaPredicted RBP32.12■■■□□ 2.73
FDFT1-207ENST00000525607 CHIC1Q5VXU3 224 aa32.04■■■□□ 2.72
FDFT1-207ENST00000525607 RAD54L2Q9Y4B4 1467 aa32.01■■■□□ 2.71
FDFT1-207ENST00000525607 TRIM41Q8WV44 630 aa32.01■■■□□ 2.71
FDFT1-207ENST00000525607 SOGA1O94964 1423 aa31.97■■■□□ 2.71
FDFT1-207ENST00000525607 TARBP1Q13395 1621 aaKnown RBP31.95■■■□□ 2.71
FDFT1-207ENST00000525607 IFT140Q96RY7 1462 aa31.95■■■□□ 2.7
FDFT1-207ENST00000525607 WDR97A6NE52 1622 aa31.86■■■□□ 2.69
FDFT1-207ENST00000525607 ZNF608Q9ULD9 1512 aaPredicted RBP31.84■■■□□ 2.69
FDFT1-207ENST00000525607 ABCA10Q8WWZ4 1543 aa31.82■■■□□ 2.68
FDFT1-207ENST00000525607 TDRD9Q8NDG6 1382 aaKnown RBP31.75■■■□□ 2.67
FDFT1-207ENST00000525607 EIF4G3O43432 1585 aaKnown RBP31.73■■■□□ 2.67
FDFT1-207ENST00000525607 AQRO60306 1485 aaKnown RBP eCLIP31.72■■■□□ 2.673e-7■■■■□ 23
FDFT1-207ENST00000525607 ABCA5Q8WWZ7 1642 aa31.67■■■□□ 2.66
FDFT1-207ENST00000525607 GAPVD1Q14C86 1478 aa31.62■■■□□ 2.65
FDFT1-207ENST00000525607 RUSC2Q8N2Y8 1516 aa31.61■■■□□ 2.65
FDFT1-207ENST00000525607 KIF27Q86VH2 1401 aa31.6■■■□□ 2.65
FDFT1-207ENST00000525607 PBRM1Q86U86 1689 aa31.56■■■□□ 2.64
FDFT1-207ENST00000525607 GRIN2BQ13224 1484 aa31.51■■■□□ 2.63
FDFT1-207ENST00000525607 ERICH3Q5RHP9 1530 aa31.44■■■□□ 2.62
FDFT1-207ENST00000525607 SNAPC4Q5SXM2 1469 aa31.44■■■□□ 2.62
FDFT1-207ENST00000525607 FAM9AQ8IZU1 332 aaPredicted RBP31.42■■■□□ 2.62
FDFT1-207ENST00000525607 IGF1RP08069 1367 aa31.4■■■□□ 2.62
FDFT1-207ENST00000525607 EEA1Q15075 1411 aa31.36■■■□□ 2.61
FDFT1-207ENST00000525607 MAGI1Q96QZ7 1491 aaPredicted RBP31.35■■■□□ 2.61
FDFT1-207ENST00000525607 ADAMTS12P58397 1594 aa31.33■■■□□ 2.61
FDFT1-207ENST00000525607 CUL7Q14999 1698 aa31.29■■■□□ 2.6
FDFT1-207ENST00000525607 CSRNP3Q8WYN3 585 aa31.27■■■□□ 2.6
FDFT1-207ENST00000525607 FHAD1B1AJZ9 1412 aa31.25■■■□□ 2.59
FDFT1-207ENST00000525607 SYNJ2O15056 1496 aa31.24■■■□□ 2.59
FDFT1-207ENST00000525607 CARMIL1Q5VZK9 1371 aa31.23■■■□□ 2.59
FDFT1-207ENST00000525607 CHD1O14646 1710 aa31.22■■■□□ 2.59
FDFT1-207ENST00000525607 FBLN2P98095 1184 aa31.21■■■□□ 2.59
FDFT1-207ENST00000525607 CHMP7Q8WUX9 453 aaPredicted RBP31.17■■■□□ 2.58
FDFT1-207ENST00000525607 PRXQ9BXM0 1461 aa31.16■■■□□ 2.58
FDFT1-207ENST00000525607 GRIN2AQ12879 1464 aa31.14■■■□□ 2.58
FDFT1-207ENST00000525607 RAPGEF2Q9Y4G8 1499 aa31.11■■■□□ 2.57
FDFT1-207ENST00000525607 KIF21BO75037 1637 aa31.05■■■□□ 2.56
FDFT1-207ENST00000525607 EHMT2Q96KQ7 1210 aa31.04■■■□□ 2.56
FDFT1-207ENST00000525607 CEP170Q5SW79 1584 aa30.99■■■□□ 2.55
FDFT1-207ENST00000525607 NUP160Q12769 1436 aa30.95■■■□□ 2.55
FDFT1-207ENST00000525607 OSCARQ8IYS5 282 aa30.92■■■□□ 2.54
FDFT1-207ENST00000525607 GOLGA3Q08378 1498 aa30.92■■■□□ 2.54
FDFT1-207ENST00000525607 CLASP1Q7Z460 1538 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms