RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 NISCHQ9Y2I1 1504 aa37.47■■■■□ 3.59
MALAT1-213ENST00000618227 CCDC180Q9P1Z9 1646 aa33.09■■■□□ 2.89
MALAT1-213ENST00000618227 ABCC9O60706 1549 aa31.81■■■□□ 2.68
MALAT1-213ENST00000618227 ZCCHC6Q5VYS8 1495 aaKnown RBP31.32■■■□□ 2.6
MALAT1-213ENST00000618227 DCAF1Q9Y4B6 1507 aa31.14■■■□□ 2.57
MALAT1-213ENST00000618227 MYO15BQ96JP2 1530 aa31.12■■■□□ 2.57
MALAT1-213ENST00000618227 NACADO15069 1562 aa31.05■■■□□ 2.56
MALAT1-213ENST00000618227 DCAF8L2P0C7V8 631 aa31■■■□□ 2.55
MALAT1-213ENST00000618227 RB1CC1Q8TDY2 1594 aa30.92■■■□□ 2.54
MALAT1-213ENST00000618227 SCRIBQ14160 1630 aa30.11■■■□□ 2.41
MALAT1-213ENST00000618227 UNC13AQ9UPW8 1703 aa30.05■■■□□ 2.4
MALAT1-213ENST00000618227 BICRAQ9NZM4 1560 aa29.91■■■□□ 2.38
MALAT1-213ENST00000618227 SHROOM4Q9ULL8 1493 aa29.82■■■□□ 2.36
MALAT1-213ENST00000618227 PABPN1Q86U42 306 aaKnown RBP eCLIP29.82■■■□□ 2.36
MALAT1-213ENST00000618227 EIF4G1Q04637 1599 aaKnown RBP29.09■■■□□ 2.25
MALAT1-213ENST00000618227 CECR2Q9BXF3 1484 aa29.07■■■□□ 2.24
MALAT1-213ENST00000618227 BAZ1AQ9NRL2 1556 aaPredicted RBP29.02■■■□□ 2.24
MALAT1-213ENST00000618227 SMARCA4P51532 1647 aa28.92■■■□□ 2.22
MALAT1-213ENST00000618227 MROH2BQ7Z745 1585 aa28.83■■■□□ 2.21
MALAT1-213ENST00000618227 CC2D2AQ9P2K1 1620 aa28.82■■■□□ 2.2
MALAT1-213ENST00000618227 DNAJC5BQ9UF47 199 aa28.79■■■□□ 2.2
MALAT1-213ENST00000618227 RSF1Q96T23 1441 aaPredicted RBP28.74■■■□□ 2.19
MALAT1-213ENST00000618227 PEG3Q9GZU2 1588 aa28.72■■■□□ 2.19
MALAT1-213ENST00000618227 SMARCA2P51531 1590 aa28.71■■■□□ 2.19
MALAT1-213ENST00000618227 ATAD2BQ9ULI0 1458 aa28.7■■■□□ 2.18
MALAT1-213ENST00000618227 NCAPD3P42695 1498 aa28.67■■■□□ 2.18
MALAT1-213ENST00000618227 HMGXB3Q12766 1538 aa28.53■■■□□ 2.16
MALAT1-213ENST00000618227 WIZO95785 1651 aa28.48■■■□□ 2.15
MALAT1-213ENST00000618227 BAZ1BQ9UIG0 1483 aaKnown RBP28.46■■■□□ 2.15
MALAT1-213ENST00000618227 AEBP2Q6ZN18 517 aaPredicted RBP28.31■■■□□ 2.12
MALAT1-213ENST00000618227 TOP2AP11388 1531 aaKnown RBP28.31■■■□□ 2.12
MALAT1-213ENST00000618227 SUPT5HO00267 1087 aaKnown RBP28.27■■■□□ 2.12
MALAT1-213ENST00000618227 CCDC88BA6NC98 1476 aa27.96■■■□□ 2.07
MALAT1-213ENST00000618227 CADPSQ9ULU8 1353 aa27.84■■■□□ 2.05
MALAT1-213ENST00000618227 LAMC3Q9Y6N6 1575 aa27.77■■■□□ 2.04
MALAT1-213ENST00000618227 CFTRP13569 1480 aa27.77■■■□□ 2.04
MALAT1-213ENST00000618227 NESP48681 1621 aa27.66■■■□□ 2.02
MALAT1-213ENST00000618227 PDS5BQ9NTI5 1447 aa27.62■■■□□ 2.01
MALAT1-213ENST00000618227 PRDM2Q13029 1718 aa27.46■■□□□ 1.99
MALAT1-213ENST00000618227 FANCD2Q9BXW9 1451 aa27.45■■□□□ 1.99
MALAT1-213ENST00000618227 ERCC6Q03468 1493 aa27.42■■□□□ 1.98
MALAT1-213ENST00000618227 CEP164Q9UPV0 1460 aa27.38■■□□□ 1.97
MALAT1-213ENST00000618227 KIF21AQ7Z4S6 1674 aa27.3■■□□□ 1.96
MALAT1-213ENST00000618227 MRC2Q9UBG0 1479 aa27.25■■□□□ 1.95
MALAT1-213ENST00000618227 ABCC8Q09428 1581 aa27.21■■□□□ 1.95
MALAT1-213ENST00000618227 THOC2Q8NI27 1593 aaKnown RBP27.16■■□□□ 1.94
MALAT1-213ENST00000618227 WDR62O43379 1518 aa27.14■■□□□ 1.94
MALAT1-213ENST00000618227 URB2Q14146 1524 aaKnown RBP27.13■■□□□ 1.93
MALAT1-213ENST00000618227 DNMBPQ6XZF7 1577 aa27.08■■□□□ 1.93
MALAT1-213ENST00000618227 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
MALAT1-213ENST00000618227 TOPBP1Q92547 1522 aa27.06■■□□□ 1.92
MALAT1-213ENST00000618227 CUX2O14529 1486 aa27.05■■□□□ 1.92
MALAT1-213ENST00000618227 CUX1P39880 1505 aa27.02■■□□□ 1.92
MALAT1-213ENST00000618227 TOP2BQ02880 1626 aa26.94■■□□□ 1.9
MALAT1-213ENST00000618227 BIVM-ERCC5R4GMW8 1640 aa26.91■■□□□ 1.9
MALAT1-213ENST00000618227 SYNJ1O43426 1573 aa26.89■■□□□ 1.9
MALAT1-213ENST00000618227 POLA1P09884 1462 aaPredicted RBP26.87■■□□□ 1.89
MALAT1-213ENST00000618227 FGD5Q6ZNL6 1462 aa26.86■■□□□ 1.89
MALAT1-213ENST00000618227 IFT140Q96RY7 1462 aa26.83■■□□□ 1.89
MALAT1-213ENST00000618227 SOGA1O94964 1423 aa26.8■■□□□ 1.88
MALAT1-213ENST00000618227 CHIC1Q5VXU3 224 aa26.77■■□□□ 1.88
MALAT1-213ENST00000618227 TRIM41Q8WV44 630 aa26.77■■□□□ 1.88
MALAT1-213ENST00000618227 TARBP1Q13395 1621 aaKnown RBP26.72■■□□□ 1.87
MALAT1-213ENST00000618227 RAD54L2Q9Y4B4 1467 aa26.7■■□□□ 1.87
MALAT1-213ENST00000618227 ABCA10Q8WWZ4 1543 aa26.69■■□□□ 1.86
MALAT1-213ENST00000618227 WDR97A6NE52 1622 aa26.64■■□□□ 1.85
MALAT1-213ENST00000618227 ZNF608Q9ULD9 1512 aaPredicted RBP26.56■■□□□ 1.84
MALAT1-213ENST00000618227 TDRD9Q8NDG6 1382 aaKnown RBP26.55■■□□□ 1.84
MALAT1-213ENST00000618227 AQRO60306 1485 aaKnown RBP eCLIP26.5■■□□□ 1.83
MALAT1-213ENST00000618227 KIF27Q86VH2 1401 aa26.5■■□□□ 1.83
MALAT1-213ENST00000618227 GAPVD1Q14C86 1478 aa26.49■■□□□ 1.83
MALAT1-213ENST00000618227 ABCA5Q8WWZ7 1642 aa26.47■■□□□ 1.83
MALAT1-213ENST00000618227 EIF4G3O43432 1585 aaKnown RBP26.46■■□□□ 1.83
MALAT1-213ENST00000618227 GRIN2BQ13224 1484 aa26.44■■□□□ 1.82
MALAT1-213ENST00000618227 ERICH3Q5RHP9 1530 aa26.39■■□□□ 1.81
MALAT1-213ENST00000618227 EEA1Q15075 1411 aa26.39■■□□□ 1.81
MALAT1-213ENST00000618227 IGF1RP08069 1367 aa26.34■■□□□ 1.81
MALAT1-213ENST00000618227 MAGI1Q96QZ7 1491 aaPredicted RBP26.33■■□□□ 1.81
MALAT1-213ENST00000618227 RUSC2Q8N2Y8 1516 aa26.29■■□□□ 1.8
MALAT1-213ENST00000618227 PBRM1Q86U86 1689 aa26.28■■□□□ 1.8
MALAT1-213ENST00000618227 SNAPC4Q5SXM2 1469 aa26.26■■□□□ 1.79
MALAT1-213ENST00000618227 FHAD1B1AJZ9 1412 aa26.23■■□□□ 1.79
MALAT1-213ENST00000618227 CSRNP3Q8WYN3 585 aa26.23■■□□□ 1.79
MALAT1-213ENST00000618227 SYNJ2O15056 1496 aa26.21■■□□□ 1.79
MALAT1-213ENST00000618227 CUL7Q14999 1698 aa26.19■■□□□ 1.78
MALAT1-213ENST00000618227 CARMIL1Q5VZK9 1371 aa26.19■■□□□ 1.78
MALAT1-213ENST00000618227 ADAMTS12P58397 1594 aa26.16■■□□□ 1.78
MALAT1-213ENST00000618227 CHMP7Q8WUX9 453 aaPredicted RBP26.15■■□□□ 1.78
MALAT1-213ENST00000618227 PRXQ9BXM0 1461 aa26.12■■□□□ 1.77
MALAT1-213ENST00000618227 FAM9AQ8IZU1 332 aaPredicted RBP26.08■■□□□ 1.77
MALAT1-213ENST00000618227 GRIN2AQ12879 1464 aa26.07■■□□□ 1.76
MALAT1-213ENST00000618227 RAPGEF2Q9Y4G8 1499 aa26.07■■□□□ 1.76
MALAT1-213ENST00000618227 FBLN2P98095 1184 aa26.06■■□□□ 1.76
MALAT1-213ENST00000618227 OSCARQ8IYS5 282 aa26.03■■□□□ 1.76
MALAT1-213ENST00000618227 CHD1O14646 1710 aa25.99■■□□□ 1.75
MALAT1-213ENST00000618227 NUP160Q12769 1436 aa25.98■■□□□ 1.75
MALAT1-213ENST00000618227 KIF21BO75037 1637 aa25.96■■□□□ 1.75
MALAT1-213ENST00000618227 GOLGA3Q08378 1498 aa25.86■■□□□ 1.73
MALAT1-213ENST00000618227 KIAA0586Q9BVV6 1533 aa25.86■■□□□ 1.73
MALAT1-213ENST00000618227 CEP170Q5SW79 1584 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms