Protein–RNA interactions for Protein: O14618

CCS, Copper chaperone for superoxide dismutase, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSO14618 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCSO14618 AL031432.3-201ENST00000607698 485 ntBASIC15.67■□□□□ 0.1
CCSO14618 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCSO14618 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCSO14618 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCSO14618 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCSO14618 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCSO14618 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.67■□□□□ 0.1
CCSO14618 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCSO14618 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCSO14618 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCSO14618 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCSO14618 SIRPAP1-201ENST00000448467 1770 ntBASIC15.67■□□□□ 0.1
CCSO14618 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
CCSO14618 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCSO14618 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.66■□□□□ 0.1
CCSO14618 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCSO14618 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCSO14618 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCSO14618 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCSO14618 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCSO14618 AC135776.1-201ENST00000319817 2481 ntBASIC15.66■□□□□ 0.1
CCSO14618 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCSO14618 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.66■□□□□ 0.1
CCSO14618 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.66■□□□□ 0.1
CCSO14618 KRT18P68-201ENST00000392293 1000 ntBASIC15.66■□□□□ 0.1
CCSO14618 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.66■□□□□ 0.1
CCSO14618 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCSO14618 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.66■□□□□ 0.1
CCSO14618 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCSO14618 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.66■□□□□ 0.1
CCSO14618 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCSO14618 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCSO14618 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCSO14618 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.66■□□□□ 0.1
CCSO14618 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCSO14618 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCSO14618 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCSO14618 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCSO14618 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
CCSO14618 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.66■□□□□ 0.1
CCSO14618 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCSO14618 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.66■□□□□ 0.1
CCSO14618 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.65■□□□□ 0.1
CCSO14618 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.65■□□□□ 0.1
CCSO14618 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCSO14618 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCSO14618 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCSO14618 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCSO14618 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCSO14618 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCSO14618 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.65■□□□□ 0.1
CCSO14618 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCSO14618 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCSO14618 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCSO14618 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CCSO14618 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCSO14618 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCSO14618 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCSO14618 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.65■□□□□ 0.1
CCSO14618 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.65■□□□□ 0.1
CCSO14618 STOX2-205ENST00000513034 807 ntTSL 3 BASIC15.65■□□□□ 0.1
CCSO14618 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.65■□□□□ 0.1
CCSO14618 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.65■□□□□ 0.1
CCSO14618 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCSO14618 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.65■□□□□ 0.1
CCSO14618 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.65■□□□□ 0.1
CCSO14618 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.65■□□□□ 0.1
CCSO14618 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.65■□□□□ 0.1
CCSO14618 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCSO14618 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCSO14618 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCSO14618 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCSO14618 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCSO14618 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCSO14618 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCSO14618 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCSO14618 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCSO14618 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCSO14618 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.65■□□□□ 0.1
CCSO14618 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CCSO14618 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.64■□□□□ 0.1
CCSO14618 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.64■□□□□ 0.1
CCSO14618 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCSO14618 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CCSO14618 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.64■□□□□ 0.09
CCSO14618 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCSO14618 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.64■□□□□ 0.09
CCSO14618 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCSO14618 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCSO14618 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCSO14618 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCSO14618 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.64■□□□□ 0.09
CCSO14618 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCSO14618 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.64■□□□□ 0.09
CCSO14618 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.64■□□□□ 0.09
CCSO14618 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
CCSO14618 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCSO14618 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CCSO14618 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms