RNA–Protein interactions for RNA: ENST00000269221.7

C18orf8-201, Transcript of Uncharacterized protein C18orf8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C18orf8, Length 2,162 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C18orf8-201ENST00000269221 NISCHQ9Y2I1 1504 aa35.27■■■■□ 3.24
C18orf8-201ENST00000269221 CCDC180Q9P1Z9 1646 aa30.13■■■□□ 2.41
C18orf8-201ENST00000269221 ZCCHC6Q5VYS8 1495 aaKnown RBP29.97■■■□□ 2.39
C18orf8-201ENST00000269221 SHROOM4Q9ULL8 1493 aa29.74■■■□□ 2.35
C18orf8-201ENST00000269221 SUPT5HO00267 1087 aaKnown RBP29.42■■■□□ 2.3
C18orf8-201ENST00000269221 DCAF1Q9Y4B6 1507 aa29.26■■■□□ 2.27
C18orf8-201ENST00000269221 CHIC1Q5VXU3 224 aa29.05■■■□□ 2.24
C18orf8-201ENST00000269221 HRCP23327 699 aa28.96■■■□□ 2.23
C18orf8-201ENST00000269221 MYO15BQ96JP2 1530 aa28.95■■■□□ 2.22
C18orf8-201ENST00000269221 DCAF8L2P0C7V8 631 aa28.46■■■□□ 2.15
C18orf8-201ENST00000269221 ABCC9O60706 1549 aa28.4■■■□□ 2.14
C18orf8-201ENST00000269221 PCGF6Q9BYE7 350 aa28.38■■■□□ 2.13
C18orf8-201ENST00000269221 TRIM26Q12899 539 aaPredicted RBP28.1■■■□□ 2.09
C18orf8-201ENST00000269221 ZEB1P37275 1124 aaPredicted RBP27.94■■■□□ 2.06
C18orf8-201ENST00000269221 RSF1Q96T23 1441 aaPredicted RBP27.93■■■□□ 2.06
C18orf8-201ENST00000269221 RB1CC1Q8TDY2 1594 aa27.92■■■□□ 2.06
C18orf8-201ENST00000269221 LOC105371045A0A1W2PR82 267 aa27.9■■■□□ 2.06
C18orf8-201ENST00000269221 PPARGC1BQ86YN6 1023 aaKnown RBP27.82■■■□□ 2.04
C18orf8-201ENST00000269221 SCRIBQ14160 1630 aa27.81■■■□□ 2.04
C18orf8-201ENST00000269221 NACADO15069 1562 aa27.65■■■□□ 2.02
C18orf8-201ENST00000269221 TRIM41Q8WV44 630 aa27.62■■■□□ 2.01
C18orf8-201ENST00000269221 PELP1Q8IZL8 1130 aaKnown RBP27.36■■□□□ 1.97
C18orf8-201ENST00000269221 BAZ1AQ9NRL2 1556 aaPredicted RBP27.3■■□□□ 1.96
C18orf8-201ENST00000269221 MROH2BQ7Z745 1585 aa27.27■■□□□ 1.96
C18orf8-201ENST00000269221 EIF4G1Q04637 1599 aaKnown RBP27.2■■□□□ 1.94
C18orf8-201ENST00000269221 CECR2Q9BXF3 1484 aa27.19■■□□□ 1.94
C18orf8-201ENST00000269221 WIZO95785 1651 aa27.16■■□□□ 1.94
C18orf8-201ENST00000269221 FAM9AQ8IZU1 332 aaPredicted RBP27.06■■□□□ 1.92
C18orf8-201ENST00000269221 TOP2AP11388 1531 aaKnown RBP26.98■■□□□ 1.91
C18orf8-201ENST00000269221 WRNQ14191 1432 aaPredicted RBP eCLIP26.96■■□□□ 1.91
C18orf8-201ENST00000269221 EEA1Q15075 1411 aa26.86■■□□□ 1.89
C18orf8-201ENST00000269221 SMARCA4P51532 1647 aa26.81■■□□□ 1.88
C18orf8-201ENST00000269221 SCAF1Q9H7N4 1312 aaKnown RBP26.74■■□□□ 1.87
C18orf8-201ENST00000269221 SMARCA2P51531 1590 aa26.74■■□□□ 1.87
C18orf8-201ENST00000269221 TNIKQ9UKE5 1360 aa26.7■■□□□ 1.86
C18orf8-201ENST00000269221 CCER1Q8TC90 406 aaPredicted RBP26.68■■□□□ 1.86
C18orf8-201ENST00000269221 CCDC88BA6NC98 1476 aa26.65■■□□□ 1.86
C18orf8-201ENST00000269221 CEP162Q5TB80 1403 aa26.63■■□□□ 1.85
C18orf8-201ENST00000269221 ABCC8Q09428 1581 aa26.58■■□□□ 1.85
C18orf8-201ENST00000269221 ACIN1Q9UKV3 1341 aaKnown RBP26.56■■□□□ 1.84
C18orf8-201ENST00000269221 UNC13AQ9UPW8 1703 aa26.55■■□□□ 1.84
C18orf8-201ENST00000269221 EHMT2Q96KQ7 1210 aa26.54■■□□□ 1.84
C18orf8-201ENST00000269221 CENPBP07199 599 aaPredicted RBP26.53■■□□□ 1.84
C18orf8-201ENST00000269221 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.52■■□□□ 1.84
C18orf8-201ENST00000269221 GOLGA3Q08378 1498 aa26.5■■□□□ 1.83
C18orf8-201ENST00000269221 PEG3Q9GZU2 1588 aa26.45■■□□□ 1.82
C18orf8-201ENST00000269221 DIEXFQ68CQ4 756 aaKnown RBP26.43■■□□□ 1.82
C18orf8-201ENST00000269221 CSRNP3Q8WYN3 585 aa26.41■■□□□ 1.82
C18orf8-201ENST00000269221 KIF21BO75037 1637 aa26.4■■□□□ 1.82
C18orf8-201ENST00000269221 SOGA1O94964 1423 aa26.39■■□□□ 1.81
C18orf8-201ENST00000269221 CEP164Q9UPV0 1460 aa26.33■■□□□ 1.81
C18orf8-201ENST00000269221 MYT1Q01538 1121 aa26.29■■□□□ 1.8
C18orf8-201ENST00000269221 NEUROD1Q13562 356 aa26.27■■□□□ 1.8
C18orf8-201ENST00000269221 BAZ1BQ9UIG0 1483 aaKnown RBP26.27■■□□□ 1.8
C18orf8-201ENST00000269221 ZNF316A6NFI3 1004 aaPredicted RBP26.23■■□□□ 1.79
C18orf8-201ENST00000269221 UBTFP17480 764 aaKnown RBP26.19■■□□□ 1.78
C18orf8-201ENST00000269221 RUSC2Q8N2Y8 1516 aa26.17■■□□□ 1.78
C18orf8-201ENST00000269221 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
C18orf8-201ENST00000269221 VPS8Q8N3P4 1428 aa26.11■■□□□ 1.77
C18orf8-201ENST00000269221 GTF3C3Q9Y5Q9 886 aa26.1■■□□□ 1.77
C18orf8-201ENST00000269221 SYNJ1O43426 1573 aa26.1■■□□□ 1.77
C18orf8-201ENST00000269221 CLIP1P30622 1438 aa26.07■■□□□ 1.76
C18orf8-201ENST00000269221 CLSPNQ9HAW4 1339 aa25.99■■□□□ 1.75
C18orf8-201ENST00000269221 TOP2BQ02880 1626 aa25.93■■□□□ 1.74
C18orf8-201ENST00000269221 ERICH3Q5RHP9 1530 aa25.93■■□□□ 1.74
C18orf8-201ENST00000269221 ATAD2BQ9ULI0 1458 aa25.92■■□□□ 1.74
C18orf8-201ENST00000269221 BIVM-ERCC5R4GMW8 1640 aa25.91■■□□□ 1.74
C18orf8-201ENST00000269221 APLP2Q06481 763 aa25.9■■□□□ 1.74
C18orf8-201ENST00000269221 TTBK1Q5TCY1 1321 aaPredicted RBP25.89■■□□□ 1.74
C18orf8-201ENST00000269221 RAPGEF2Q9Y4G8 1499 aa25.81■■□□□ 1.72
C18orf8-201ENST00000269221 HNRNPUL2Q1KMD3 747 aaKnown RBP25.73■■□□□ 1.71
C18orf8-201ENST00000269221 PRXQ9BXM0 1461 aa25.71■■□□□ 1.71
C18orf8-201ENST00000269221 MIER1Q8N108 512 aa25.68■■□□□ 1.7
C18orf8-201ENST00000269221 CUX2O14529 1486 aa25.64■■□□□ 1.69
C18orf8-201ENST00000269221 HMGXB3Q12766 1538 aa25.62■■□□□ 1.69
C18orf8-201ENST00000269221 PABPN1Q86U42 306 aaKnown RBP eCLIP25.61■■□□□ 1.69
C18orf8-201ENST00000269221 ARAP1Q96P48 1450 aa25.6■■□□□ 1.69
C18orf8-201ENST00000269221 RRBP1Q9P2E9 1410 aaKnown RBP25.6■■□□□ 1.69
C18orf8-201ENST00000269221 DHX57Q6P158 1386 aaKnown RBP25.59■■□□□ 1.69
C18orf8-201ENST00000269221 YTHDC1Q96MU7 727 aaKnown RBP25.53■■□□□ 1.68
C18orf8-201ENST00000269221 KIF27Q86VH2 1401 aa25.5■■□□□ 1.67
C18orf8-201ENST00000269221 MAP3K1Q13233 1512 aa25.47■■□□□ 1.67
C18orf8-201ENST00000269221 PRDM2Q13029 1718 aa25.46■■□□□ 1.67
C18orf8-201ENST00000269221 NCAPD3P42695 1498 aa25.45■■□□□ 1.67
C18orf8-201ENST00000269221 CUX1P39880 1505 aa25.41■■□□□ 1.66
C18orf8-201ENST00000269221 CCNB3Q8WWL7 1395 aa25.36■■□□□ 1.65
C18orf8-201ENST00000269221 CFTRP13569 1480 aa25.33■■□□□ 1.64
C18orf8-201ENST00000269221 ARHGAP35Q9NRY4 1499 aa25.31■■□□□ 1.64
C18orf8-201ENST00000269221 TIAM1Q13009 1591 aa25.25■■□□□ 1.63
C18orf8-201ENST00000269221 KANK4Q5T7N3 995 aaPredicted RBP25.24■■□□□ 1.63
C18orf8-201ENST00000269221 CFAP43Q8NDM7 1665 aa25.16■■□□□ 1.62
C18orf8-201ENST00000269221 RANGAP1P46060 587 aaPredicted RBP25.16■■□□□ 1.62
C18orf8-201ENST00000269221 TIMELESSQ9UNS1 1208 aa25.15■■□□□ 1.62
C18orf8-201ENST00000269221 SUPT16HQ9Y5B9 1047 aaKnown RBP25.14■■□□□ 1.62
C18orf8-201ENST00000269221 FHAD1B1AJZ9 1412 aa25.12■■□□□ 1.61
C18orf8-201ENST00000269221 MAPKBP1O60336 1514 aa25.12■■□□□ 1.61
C18orf8-201ENST00000269221 SETD5Q9C0A6 1442 aa25.1■■□□□ 1.61
C18orf8-201ENST00000269221 RAB3GAP2Q9H2M9 1393 aa25.09■■□□□ 1.61
C18orf8-201ENST00000269221 LRRC9Q6ZRR7 1453 aa25.08■■□□□ 1.61
C18orf8-201ENST00000269221 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms