RNA–Protein interactions for RNA: ENST00000448467.1

SIRPAP1-201, Transcript of signal regulatory protein alpha pseudogene 1, humanhuman

BASIC

Gene SIRPAP1, Length 1,770 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP1-201ENST00000448467 NISCHQ9Y2I1 1504 aa41.47■■■■■ 4.23
SIRPAP1-201ENST00000448467 CCDC180Q9P1Z9 1646 aa36.46■■■■□ 3.43
SIRPAP1-201ENST00000448467 ABCC9O60706 1549 aa35.33■■■■□ 3.25
SIRPAP1-201ENST00000448467 DCAF8L2P0C7V8 631 aa34.71■■■■□ 3.15
SIRPAP1-201ENST00000448467 ZCCHC6Q5VYS8 1495 aaKnown RBP34.67■■■■□ 3.14
SIRPAP1-201ENST00000448467 DCAF1Q9Y4B6 1507 aa34.18■■■■□ 3.06
SIRPAP1-201ENST00000448467 NACADO15069 1562 aa34.16■■■■□ 3.06
SIRPAP1-201ENST00000448467 RB1CC1Q8TDY2 1594 aa34.08■■■■□ 3.05
SIRPAP1-201ENST00000448467 MYO15BQ96JP2 1530 aa34.04■■■■□ 3.04
SIRPAP1-201ENST00000448467 SCRIBQ14160 1630 aa33.57■■■□□ 2.97
SIRPAP1-201ENST00000448467 SHROOM4Q9ULL8 1493 aa33.49■■■□□ 2.95
SIRPAP1-201ENST00000448467 UNC13AQ9UPW8 1703 aa33.42■■■□□ 2.94
SIRPAP1-201ENST00000448467 PABPN1Q86U42 306 aaKnown RBP eCLIP33.21■■■□□ 2.91
SIRPAP1-201ENST00000448467 BICRAQ9NZM4 1560 aa33.08■■■□□ 2.89
SIRPAP1-201ENST00000448467 CECR2Q9BXF3 1484 aa32.36■■■□□ 2.77
SIRPAP1-201ENST00000448467 EIF4G1Q04637 1599 aaKnown RBP32.16■■■□□ 2.74
SIRPAP1-201ENST00000448467 BAZ1AQ9NRL2 1556 aaPredicted RBP32.07■■■□□ 2.72
SIRPAP1-201ENST00000448467 MROH2BQ7Z745 1585 aa32.06■■■□□ 2.72
SIRPAP1-201ENST00000448467 SMARCA4P51532 1647 aa32.06■■■□□ 2.72
SIRPAP1-201ENST00000448467 CC2D2AQ9P2K1 1620 aa31.91■■■□□ 2.7
SIRPAP1-201ENST00000448467 RSF1Q96T23 1441 aaPredicted RBP31.9■■■□□ 2.7
SIRPAP1-201ENST00000448467 DNAJC5BQ9UF47 199 aa31.89■■■□□ 2.69
SIRPAP1-201ENST00000448467 SUPT5HO00267 1087 aaKnown RBP31.83■■■□□ 2.69
SIRPAP1-201ENST00000448467 WIZO95785 1651 aa31.78■■■□□ 2.68
SIRPAP1-201ENST00000448467 ATAD2BQ9ULI0 1458 aa31.72■■■□□ 2.67
SIRPAP1-201ENST00000448467 SMARCA2P51531 1590 aa31.64■■■□□ 2.66
SIRPAP1-201ENST00000448467 PEG3Q9GZU2 1588 aa31.62■■■□□ 2.65
SIRPAP1-201ENST00000448467 NCAPD3P42695 1498 aa31.53■■■□□ 2.64
SIRPAP1-201ENST00000448467 BAZ1BQ9UIG0 1483 aaKnown RBP31.52■■■□□ 2.64
SIRPAP1-201ENST00000448467 HMGXB3Q12766 1538 aa31.41■■■□□ 2.62
SIRPAP1-201ENST00000448467 TOP2AP11388 1531 aaKnown RBP31.36■■■□□ 2.61
SIRPAP1-201ENST00000448467 CCDC88BA6NC98 1476 aa31.08■■■□□ 2.57
SIRPAP1-201ENST00000448467 NESP48681 1621 aa30.78■■■□□ 2.52
SIRPAP1-201ENST00000448467 CADPSQ9ULU8 1353 aa30.71■■■□□ 2.51
SIRPAP1-201ENST00000448467 CFTRP13569 1480 aa30.64■■■□□ 2.49
SIRPAP1-201ENST00000448467 LAMC3Q9Y6N6 1575 aa30.59■■■□□ 2.49
SIRPAP1-201ENST00000448467 PRDM2Q13029 1718 aa30.43■■■□□ 2.46
SIRPAP1-201ENST00000448467 PDS5BQ9NTI5 1447 aa30.4■■■□□ 2.46
SIRPAP1-201ENST00000448467 FANCD2Q9BXW9 1451 aa30.39■■■□□ 2.46
SIRPAP1-201ENST00000448467 KIF21AQ7Z4S6 1674 aa30.37■■■□□ 2.45
SIRPAP1-201ENST00000448467 ERCC6Q03468 1493 aa30.35■■■□□ 2.45
SIRPAP1-201ENST00000448467 CEP164Q9UPV0 1460 aa30.27■■■□□ 2.44
SIRPAP1-201ENST00000448467 ABCC8Q09428 1581 aa30.23■■■□□ 2.43
SIRPAP1-201ENST00000448467 MRC2Q9UBG0 1479 aa30.07■■■□□ 2.4
SIRPAP1-201ENST00000448467 URB2Q14146 1524 aaKnown RBP30.06■■■□□ 2.4
SIRPAP1-201ENST00000448467 WRNQ14191 1432 aaPredicted RBP eCLIP30.05■■■□□ 2.4
SIRPAP1-201ENST00000448467 THOC2Q8NI27 1593 aaKnown RBP30.03■■■□□ 2.4
SIRPAP1-201ENST00000448467 CUX1P39880 1505 aa30.02■■■□□ 2.4
SIRPAP1-201ENST00000448467 SYNJ1O43426 1573 aa29.99■■■□□ 2.39
SIRPAP1-201ENST00000448467 CHIC1Q5VXU3 224 aa29.98■■■□□ 2.39
SIRPAP1-201ENST00000448467 TOPBP1Q92547 1522 aa29.97■■■□□ 2.39
SIRPAP1-201ENST00000448467 DNMBPQ6XZF7 1577 aa29.95■■■□□ 2.39
SIRPAP1-201ENST00000448467 WDR62O43379 1518 aa29.92■■■□□ 2.38
SIRPAP1-201ENST00000448467 TRIM41Q8WV44 630 aa29.92■■■□□ 2.38
SIRPAP1-201ENST00000448467 TOP2BQ02880 1626 aa29.88■■■□□ 2.37
SIRPAP1-201ENST00000448467 BIVM-ERCC5R4GMW8 1640 aa29.84■■■□□ 2.37
SIRPAP1-201ENST00000448467 FGD5Q6ZNL6 1462 aa29.82■■■□□ 2.36
SIRPAP1-201ENST00000448467 POLA1P09884 1462 aaPredicted RBP29.77■■■□□ 2.36
SIRPAP1-201ENST00000448467 RAD54L2Q9Y4B4 1467 aa29.74■■■□□ 2.35
SIRPAP1-201ENST00000448467 CUX2O14529 1486 aa29.7■■■□□ 2.34
SIRPAP1-201ENST00000448467 SOGA1O94964 1423 aa29.69■■■□□ 2.34
SIRPAP1-201ENST00000448467 TARBP1Q13395 1621 aaKnown RBP29.57■■■□□ 2.32
SIRPAP1-201ENST00000448467 IFT140Q96RY7 1462 aa29.57■■■□□ 2.32
SIRPAP1-201ENST00000448467 ZNF608Q9ULD9 1512 aaPredicted RBP29.52■■■□□ 2.32
SIRPAP1-201ENST00000448467 TDRD9Q8NDG6 1382 aaKnown RBP29.51■■■□□ 2.32
SIRPAP1-201ENST00000448467 ABCA10Q8WWZ4 1543 aa29.48■■■□□ 2.31
SIRPAP1-201ENST00000448467 WDR97A6NE52 1622 aa29.46■■■□□ 2.31
SIRPAP1-201ENST00000448467 FAM9AQ8IZU1 332 aaPredicted RBP29.46■■■□□ 2.31
SIRPAP1-201ENST00000448467 RUSC2Q8N2Y8 1516 aa29.45■■■□□ 2.31
SIRPAP1-201ENST00000448467 AQRO60306 1485 aaKnown RBP eCLIP29.45■■■□□ 2.3
SIRPAP1-201ENST00000448467 EIF4G3O43432 1585 aaKnown RBP29.36■■■□□ 2.29
SIRPAP1-201ENST00000448467 KIF27Q86VH2 1401 aa29.35■■■□□ 2.29
SIRPAP1-201ENST00000448467 GAPVD1Q14C86 1478 aa29.33■■■□□ 2.29
SIRPAP1-201ENST00000448467 ABCA5Q8WWZ7 1642 aa29.32■■■□□ 2.28
SIRPAP1-201ENST00000448467 PBRM1Q86U86 1689 aa29.23■■■□□ 2.27
SIRPAP1-201ENST00000448467 GRIN2BQ13224 1484 aa29.2■■■□□ 2.26
SIRPAP1-201ENST00000448467 IGF1RP08069 1367 aa29.19■■■□□ 2.26
SIRPAP1-201ENST00000448467 EHMT2Q96KQ7 1210 aa29.17■■■□□ 2.26
SIRPAP1-201ENST00000448467 CSRNP3Q8WYN3 585 aa29.16■■■□□ 2.26
SIRPAP1-201ENST00000448467 SNAPC4Q5SXM2 1469 aa29.14■■■□□ 2.26
SIRPAP1-201ENST00000448467 EEA1Q15075 1411 aa29.13■■■□□ 2.25
SIRPAP1-201ENST00000448467 ERICH3Q5RHP9 1530 aa29.11■■■□□ 2.25
SIRPAP1-201ENST00000448467 FBLN2P98095 1184 aa29.07■■■□□ 2.24
SIRPAP1-201ENST00000448467 CARMIL1Q5VZK9 1371 aa29.03■■■□□ 2.24
SIRPAP1-201ENST00000448467 MAGI1Q96QZ7 1491 aaPredicted RBP29.01■■■□□ 2.23
SIRPAP1-201ENST00000448467 ADAMTS12P58397 1594 aa29■■■□□ 2.23
SIRPAP1-201ENST00000448467 HRCP23327 699 aa29■■■□□ 2.23
SIRPAP1-201ENST00000448467 CUL7Q14999 1698 aa28.98■■■□□ 2.23
SIRPAP1-201ENST00000448467 CHMP7Q8WUX9 453 aaPredicted RBP28.98■■■□□ 2.23
SIRPAP1-201ENST00000448467 FHAD1B1AJZ9 1412 aa28.97■■■□□ 2.23
SIRPAP1-201ENST00000448467 PRXQ9BXM0 1461 aa28.93■■■□□ 2.22
SIRPAP1-201ENST00000448467 SYNJ2O15056 1496 aa28.92■■■□□ 2.22
SIRPAP1-201ENST00000448467 RAPGEF2Q9Y4G8 1499 aa28.9■■■□□ 2.22
SIRPAP1-201ENST00000448467 CHD1O14646 1710 aa28.9■■■□□ 2.22
SIRPAP1-201ENST00000448467 LOC105371045A0A1W2PR82 267 aa28.9■■■□□ 2.22
SIRPAP1-201ENST00000448467 GRIN2AQ12879 1464 aa28.84■■■□□ 2.21
SIRPAP1-201ENST00000448467 KIF21BO75037 1637 aa28.84■■■□□ 2.21
SIRPAP1-201ENST00000448467 UBTFP17480 764 aaKnown RBP28.79■■■□□ 2.2
SIRPAP1-201ENST00000448467 GOLGA3Q08378 1498 aa28.77■■■□□ 2.2
SIRPAP1-201ENST00000448467 CEP170Q5SW79 1584 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms