RNA–Protein interactions for RNA: ENST00000405581.3

NRXN1-209, Transcript of neurexin 1, humanhuman

TSL 1 (best) BASIC

Gene NRXN1, Length 5,078 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-209ENST00000405581 DCAF8L2P0C7V8 631 aa29.88■■■□□ 2.37
NRXN1-209ENST00000405581 NISCHQ9Y2I1 1504 aa28.89■■■□□ 2.22
NRXN1-209ENST00000405581 SUPT5HO00267 1087 aaKnown RBP28.2■■■□□ 2.11
NRXN1-209ENST00000405581 SHROOM4Q9ULL8 1493 aa27.49■■□□□ 1.99
NRXN1-209ENST00000405581 PELP1Q8IZL8 1130 aaKnown RBP27.44■■□□□ 1.98
NRXN1-209ENST00000405581 APLP2Q06481 763 aa27.35■■□□□ 1.97
NRXN1-209ENST00000405581 FAM9AQ8IZU1 332 aaPredicted RBP27.19■■□□□ 1.94
NRXN1-209ENST00000405581 EHMT2Q96KQ7 1210 aa27.18■■□□□ 1.94
NRXN1-209ENST00000405581 TTBK1Q5TCY1 1321 aaPredicted RBP26.31■■□□□ 1.8
NRXN1-209ENST00000405581 ZEB1P37275 1124 aaPredicted RBP26.29■■□□□ 1.8
NRXN1-209ENST00000405581 PCGF6Q9BYE7 350 aa26.27■■□□□ 1.8
NRXN1-209ENST00000405581 TRIM41Q8WV44 630 aa26.26■■□□□ 1.79
NRXN1-209ENST00000405581 CCER1Q8TC90 406 aaPredicted RBP26.23■■□□□ 1.79
NRXN1-209ENST00000405581 CENPBP07199 599 aaPredicted RBP26.22■■□□□ 1.79
NRXN1-209ENST00000405581 RANGAP1P46060 587 aaPredicted RBP26.16■■□□□ 1.78
NRXN1-209ENST00000405581 ATP1B4Q9UN42 357 aaPredicted RBP26.16■■□□□ 1.78
NRXN1-209ENST00000405581 ERICH6Q7L0X2 663 aa26.1■■□□□ 1.77
NRXN1-209ENST00000405581 UBTFP17480 764 aaKnown RBP26.05■■□□□ 1.76
NRXN1-209ENST00000405581 NEFLP07196 543 aa25.81■■□□□ 1.72
NRXN1-209ENST00000405581 MYT1LQ9UL68 1186 aa25.36■■□□□ 1.65
NRXN1-209ENST00000405581 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.33■■□□□ 1.64
NRXN1-209ENST00000405581 HNRNPUL2Q1KMD3 747 aaKnown RBP25.33■■□□□ 1.64
NRXN1-209ENST00000405581 YTHDC1Q96MU7 727 aaKnown RBP25.32■■□□□ 1.64
NRXN1-209ENST00000405581 TRIM26Q12899 539 aaPredicted RBP25.29■■□□□ 1.64
NRXN1-209ENST00000405581 MYT1Q01538 1121 aa25.22■■□□□ 1.63
NRXN1-209ENST00000405581 PPARGC1BQ86YN6 1023 aaKnown RBP25.16■■□□□ 1.62
NRXN1-209ENST00000405581 DAXXQ9UER7 740 aaPredicted RBP25.13■■□□□ 1.61
NRXN1-209ENST00000405581 ITGAEP38570 1179 aa25.11■■□□□ 1.61
NRXN1-209ENST00000405581 POLR3GLQ9BT43 218 aa25.07■■□□□ 1.6
NRXN1-209ENST00000405581 HRCP23327 699 aa24.86■■□□□ 1.57
NRXN1-209ENST00000405581 ABCC9O60706 1549 aa24.8■■□□□ 1.56
NRXN1-209ENST00000405581 CHIC1Q5VXU3 224 aa24.8■■□□□ 1.56
NRXN1-209ENST00000405581 SLC4A1APQ9BWU0 796 aaKnown RBP24.72■■□□□ 1.55
NRXN1-209ENST00000405581 LOC105371045A0A1W2PR82 267 aa24.7■■□□□ 1.55
NRXN1-209ENST00000405581 CNGB1Q14028 1251 aaPredicted RBP24.63■■□□□ 1.53
NRXN1-209ENST00000405581 FAM50AQ14320 339 aaKnown RBP24.56■■□□□ 1.52
NRXN1-209ENST00000405581 PABPN1Q86U42 306 aaKnown RBP eCLIP24.54■■□□□ 1.52
NRXN1-209ENST00000405581 CLSPNQ9HAW4 1339 aa24.54■■□□□ 1.52
NRXN1-209ENST00000405581 TRIM52Q96A61 297 aa24.51■■□□□ 1.51
NRXN1-209ENST00000405581 ZNF316A6NFI3 1004 aaPredicted RBP24.46■■□□□ 1.51
NRXN1-209ENST00000405581 RTL5Q5HYW3 569 aaPredicted RBP24.41■■□□□ 1.5
NRXN1-209ENST00000405581 DIEXFQ68CQ4 756 aaKnown RBP24.38■■□□□ 1.49
NRXN1-209ENST00000405581 ZBTB47Q9UFB7 747 aaPredicted RBP24.26■■□□□ 1.47
NRXN1-209ENST00000405581 NEUROD1Q13562 356 aa24.24■■□□□ 1.47
NRXN1-209ENST00000405581 ANP32CO43423 234 aa24.2■■□□□ 1.47
NRXN1-209ENST00000405581 FBLN2P98095 1184 aa24.18■■□□□ 1.46
NRXN1-209ENST00000405581 ZNF326Q5BKZ1 582 aaKnown RBP24.16■■□□□ 1.46
NRXN1-209ENST00000405581 NEFMP07197 916 aa24.12■■□□□ 1.45
NRXN1-209ENST00000405581 CDK11AQ9UQ88 783 aaPredicted RBP24■■□□□ 1.43
NRXN1-209ENST00000405581 CANXP27824 592 aaKnown RBP23.97■■□□□ 1.43
NRXN1-209ENST00000405581 BCANQ96GW7 911 aa23.95■■□□□ 1.43
NRXN1-209ENST00000405581 ZCCHC6Q5VYS8 1495 aaKnown RBP23.93■■□□□ 1.42
NRXN1-209ENST00000405581 CSRNP3Q8WYN3 585 aa23.91■■□□□ 1.42
NRXN1-209ENST00000405581 SLC24A1O60721 1099 aa23.89■■□□□ 1.41
NRXN1-209ENST00000405581 SCRIBQ14160 1630 aa23.84■■□□□ 1.41
NRXN1-209ENST00000405581 ESF1Q9H501 851 aaKnown RBP23.84■■□□□ 1.41
NRXN1-209ENST00000405581 CCDC180Q9P1Z9 1646 aa23.81■■□□□ 1.4
NRXN1-209ENST00000405581 P3H3Q8IVL6 736 aa23.8■■□□□ 1.4
NRXN1-209ENST00000405581 ZNF777Q9ULD5 760 aaPredicted RBP23.79■■□□□ 1.4
NRXN1-209ENST00000405581 ARID3CA6NKF2 412 aa23.72■■□□□ 1.39
NRXN1-209ENST00000405581 GTF3C3Q9Y5Q9 886 aa23.7■■□□□ 1.39
NRXN1-209ENST00000405581 NPM1P06748 294 aaKnown RBP eCLIP23.68■■□□□ 1.38
NRXN1-209ENST00000405581 STAG3Q9UJ98 1225 aa23.63■■□□□ 1.37
NRXN1-209ENST00000405581 ANP32AP39687 249 aaKnown RBP23.62■■□□□ 1.37
NRXN1-209ENST00000405581 BCL11AQ9H165 835 aa23.62■■□□□ 1.37
NRXN1-209ENST00000405581 TONSLQ96HA7 1378 aa23.59■■□□□ 1.37
NRXN1-209ENST00000405581 CHGAP10645 457 aaKnown RBP23.55■■□□□ 1.36
NRXN1-209ENST00000405581 UPF2Q9HAU5 1272 aaKnown RBP23.44■■□□□ 1.34
NRXN1-209ENST00000405581 ANP32BQ92688 251 aaKnown RBP23.42■■□□□ 1.34
NRXN1-209ENST00000405581 ACIN1Q9UKV3 1341 aaKnown RBP23.39■■□□□ 1.34
NRXN1-209ENST00000405581 HSP90AA1P07900 732 aaKnown RBP23.38■■□□□ 1.33
NRXN1-209ENST00000405581 RB1CC1Q8TDY2 1594 aa23.38■■□□□ 1.33
NRXN1-209ENST00000405581 TSPY4P0CV99 314 aa23.38■■□□□ 1.33
NRXN1-209ENST00000405581 TSPY10P0CW01 314 aa23.38■■□□□ 1.33
NRXN1-209ENST00000405581 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.34■■□□□ 1.33
NRXN1-209ENST00000405581 NPM2Q86SE8 214 aaKnown RBP23.31■■□□□ 1.32
NRXN1-209ENST00000405581 HNRNPUQ00839 825 aaKnown RBP eCLIP23.31■■□□□ 1.32
NRXN1-209ENST00000405581 TMC1Q8TDI8 760 aa23.27■■□□□ 1.32
NRXN1-209ENST00000405581 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.25■■□□□ 1.31
NRXN1-209ENST00000405581 WDR43Q15061 677 aaKnown RBP eCLIP23.23■■□□□ 1.31
NRXN1-209ENST00000405581 FAM9BQ8IZU0 186 aa23.23■■□□□ 1.31
NRXN1-209ENST00000405581 MTUS2Q5JR59 1369 aa23.22■■□□□ 1.31
NRXN1-209ENST00000405581 FKBP8Q14318 412 aa23.22■■□□□ 1.31
NRXN1-209ENST00000405581 DDX10Q13206 875 aaKnown RBP23.21■■□□□ 1.31
NRXN1-209ENST00000405581 PLPPR3Q6T4P5 718 aa23.21■■□□□ 1.31
NRXN1-209ENST00000405581 CHIC2Q9UKJ5 165 aa23.21■■□□□ 1.31
NRXN1-209ENST00000405581 NACADO15069 1562 aa23.19■■□□□ 1.3
NRXN1-209ENST00000405581 CHMP7Q8WUX9 453 aaPredicted RBP23.19■■□□□ 1.3
NRXN1-209ENST00000405581 DCAF1Q9Y4B6 1507 aa23.15■■□□□ 1.3
NRXN1-209ENST00000405581 CCDC136Q96JN2 1154 aa23.12■■□□□ 1.29
NRXN1-209ENST00000405581 RSF1Q96T23 1441 aaPredicted RBP23.09■■□□□ 1.29
NRXN1-209ENST00000405581 MRS2Q9HD23 443 aa23.08■■□□□ 1.29
NRXN1-209ENST00000405581 SALL2Q9Y467 1007 aaPredicted RBP23.08■■□□□ 1.29
NRXN1-209ENST00000405581 MYH16Q9H6N6 1097 aa23.07■■□□□ 1.28
NRXN1-209ENST00000405581 KDM2AQ9Y2K7 1162 aa23.07■■□□□ 1.28
NRXN1-209ENST00000405581 EIF4G2P78344 907 aaKnown RBP eCLIP23.01■■□□□ 1.27
NRXN1-209ENST00000405581 PLEKHD1A6NEE1 506 aa23■■□□□ 1.27
NRXN1-209ENST00000405581 PPP1R15AO75807 674 aaPredicted RBP22.99■■□□□ 1.27
NRXN1-209ENST00000405581 EEA1Q15075 1411 aa22.99■■□□□ 1.27
NRXN1-209ENST00000405581 CLIP1P30622 1438 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms