RNA–Protein interactions for RNA: ENST00000391918.6

CALM3-202, Transcript of calmodulin 3, humanhuman

TSL 2 BASIC

Gene CALM3, Length 702 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-202ENST00000391918 NISCHQ9Y2I1 1504 aa46.78■■■■■ 5.08
CALM3-202ENST00000391918 CCDC180Q9P1Z9 1646 aa41.33■■■■■ 4.21
CALM3-202ENST00000391918 ABCC9O60706 1549 aa39.79■■■■□ 3.96
CALM3-202ENST00000391918 ZCCHC6Q5VYS8 1495 aaKnown RBP39.11■■■■□ 3.85
CALM3-202ENST00000391918 DCAF8L2P0C7V8 631 aa38.88■■■■□ 3.81
CALM3-202ENST00000391918 DCAF1Q9Y4B6 1507 aa38.73■■■■□ 3.79
CALM3-202ENST00000391918 NACADO15069 1562 aa38.69■■■■□ 3.78
CALM3-202ENST00000391918 MYO15BQ96JP2 1530 aa38.64■■■■□ 3.78
CALM3-202ENST00000391918 RB1CC1Q8TDY2 1594 aa38.59■■■■□ 3.77
CALM3-202ENST00000391918 SCRIBQ14160 1630 aa37.79■■■■□ 3.64
CALM3-202ENST00000391918 UNC13AQ9UPW8 1703 aa37.66■■■■□ 3.62
CALM3-202ENST00000391918 SHROOM4Q9ULL8 1493 aa37.41■■■■□ 3.58
CALM3-202ENST00000391918 BICRAQ9NZM4 1560 aa37.31■■■■□ 3.56
CALM3-202ENST00000391918 PABPN1Q86U42 306 aaKnown RBP eCLIP37.28■■■■□ 3.56
CALM3-202ENST00000391918 EIF4G1Q04637 1599 aaKnown RBP36.33■■■■□ 3.41
CALM3-202ENST00000391918 CECR2Q9BXF3 1484 aa36.33■■■■□ 3.41
CALM3-202ENST00000391918 BAZ1AQ9NRL2 1556 aaPredicted RBP36.25■■■■□ 3.39
CALM3-202ENST00000391918 SMARCA4P51532 1647 aa36.17■■■■□ 3.38
CALM3-202ENST00000391918 MROH2BQ7Z745 1585 aa36.05■■■■□ 3.36
CALM3-202ENST00000391918 CC2D2AQ9P2K1 1620 aa36.01■■■■□ 3.35
CALM3-202ENST00000391918 RSF1Q96T23 1441 aaPredicted RBP35.88■■■■□ 3.33
CALM3-202ENST00000391918 SMARCA2P51531 1590 aa35.82■■■■□ 3.32
CALM3-202ENST00000391918 DNAJC5BQ9UF47 199 aa35.79■■■■□ 3.32
CALM3-202ENST00000391918 PEG3Q9GZU2 1588 aa35.78■■■■□ 3.32
CALM3-202ENST00000391918 ATAD2BQ9ULI0 1458 aa35.78■■■■□ 3.32
CALM3-202ENST00000391918 WIZO95785 1651 aa35.72■■■■□ 3.31
CALM3-202ENST00000391918 NCAPD3P42695 1498 aa35.65■■■■□ 3.3
CALM3-202ENST00000391918 BAZ1BQ9UIG0 1483 aaKnown RBP35.59■■■■□ 3.29
CALM3-202ENST00000391918 HMGXB3Q12766 1538 aa35.57■■■■□ 3.29
CALM3-202ENST00000391918 SUPT5HO00267 1087 aaKnown RBP35.54■■■■□ 3.28
CALM3-202ENST00000391918 TOP2AP11388 1531 aaKnown RBP35.41■■■■□ 3.26
CALM3-202ENST00000391918 CCDC88BA6NC98 1476 aa34.96■■■■□ 3.19
CALM3-202ENST00000391918 CADPSQ9ULU8 1353 aa34.66■■■■□ 3.14
CALM3-202ENST00000391918 LAMC3Q9Y6N6 1575 aa34.66■■■■□ 3.14
CALM3-202ENST00000391918 NESP48681 1621 aa34.59■■■■□ 3.13
CALM3-202ENST00000391918 CFTRP13569 1480 aa34.59■■■■□ 3.13
CALM3-202ENST00000391918 PRDM2Q13029 1718 aa34.44■■■■□ 3.1
CALM3-202ENST00000391918 PDS5BQ9NTI5 1447 aa34.41■■■■□ 3.1
CALM3-202ENST00000391918 ERCC6Q03468 1493 aa34.31■■■■□ 3.08
CALM3-202ENST00000391918 FANCD2Q9BXW9 1451 aa34.29■■■■□ 3.08
CALM3-202ENST00000391918 KIF21AQ7Z4S6 1674 aa34.24■■■■□ 3.07
CALM3-202ENST00000391918 CEP164Q9UPV0 1460 aa34.21■■■■□ 3.07
CALM3-202ENST00000391918 MRC2Q9UBG0 1479 aa34.01■■■■□ 3.04
CALM3-202ENST00000391918 THOC2Q8NI27 1593 aaKnown RBP33.94■■■■□ 3.02
CALM3-202ENST00000391918 ABCC8Q09428 1581 aa33.9■■■■□ 3.02
CALM3-202ENST00000391918 URB2Q14146 1524 aaKnown RBP33.88■■■■□ 3.01
CALM3-202ENST00000391918 WRNQ14191 1432 aaPredicted RBP eCLIP33.86■■■■□ 3.01
CALM3-202ENST00000391918 DNMBPQ6XZF7 1577 aa33.85■■■■□ 3.01
CALM3-202ENST00000391918 WDR62O43379 1518 aa33.85■■■■□ 3.01
CALM3-202ENST00000391918 TOPBP1Q92547 1522 aa33.81■■■■□ 3
CALM3-202ENST00000391918 CUX1P39880 1505 aa33.79■■■■□ 3
CALM3-202ENST00000391918 SYNJ1O43426 1573 aa33.72■■■□□ 2.99
CALM3-202ENST00000391918 TOP2BQ02880 1626 aa33.7■■■□□ 2.99
CALM3-202ENST00000391918 BIVM-ERCC5R4GMW8 1640 aa33.69■■■□□ 2.98
CALM3-202ENST00000391918 CUX2O14529 1486 aa33.64■■■□□ 2.98
CALM3-202ENST00000391918 FGD5Q6ZNL6 1462 aa33.6■■■□□ 2.97
CALM3-202ENST00000391918 POLA1P09884 1462 aaPredicted RBP33.56■■■□□ 2.96
CALM3-202ENST00000391918 TRIM41Q8WV44 630 aa33.56■■■□□ 2.96
CALM3-202ENST00000391918 CHIC1Q5VXU3 224 aa33.5■■■□□ 2.95
CALM3-202ENST00000391918 IFT140Q96RY7 1462 aa33.46■■■□□ 2.95
CALM3-202ENST00000391918 SOGA1O94964 1423 aa33.45■■■□□ 2.95
CALM3-202ENST00000391918 RAD54L2Q9Y4B4 1467 aa33.4■■■□□ 2.94
CALM3-202ENST00000391918 TARBP1Q13395 1621 aaKnown RBP33.37■■■□□ 2.93
CALM3-202ENST00000391918 ABCA10Q8WWZ4 1543 aa33.29■■■□□ 2.92
CALM3-202ENST00000391918 WDR97A6NE52 1622 aa33.27■■■□□ 2.92
CALM3-202ENST00000391918 ZNF608Q9ULD9 1512 aaPredicted RBP33.2■■■□□ 2.91
CALM3-202ENST00000391918 TDRD9Q8NDG6 1382 aaKnown RBP33.17■■■□□ 2.9
CALM3-202ENST00000391918 EIF4G3O43432 1585 aaKnown RBP33.16■■■□□ 2.9
CALM3-202ENST00000391918 KIF27Q86VH2 1401 aa33.12■■■□□ 2.89
CALM3-202ENST00000391918 ABCA5Q8WWZ7 1642 aa33.11■■■□□ 2.89
CALM3-202ENST00000391918 AQRO60306 1485 aaKnown RBP eCLIP33.11■■■□□ 2.891e-10■■□□□ 12.6
CALM3-202ENST00000391918 GAPVD1Q14C86 1478 aa33.08■■■□□ 2.89
CALM3-202ENST00000391918 GRIN2BQ13224 1484 aa32.99■■■□□ 2.87
CALM3-202ENST00000391918 PBRM1Q86U86 1689 aa32.99■■■□□ 2.87
CALM3-202ENST00000391918 EEA1Q15075 1411 aa32.94■■■□□ 2.86
CALM3-202ENST00000391918 RUSC2Q8N2Y8 1516 aa32.94■■■□□ 2.86
CALM3-202ENST00000391918 ERICH3Q5RHP9 1530 aa32.92■■■□□ 2.86
CALM3-202ENST00000391918 SNAPC4Q5SXM2 1469 aa32.86■■■□□ 2.85
CALM3-202ENST00000391918 FAM9AQ8IZU1 332 aaPredicted RBP32.84■■■□□ 2.85
CALM3-202ENST00000391918 MAGI1Q96QZ7 1491 aaPredicted RBP32.84■■■□□ 2.85
CALM3-202ENST00000391918 IGF1RP08069 1367 aa32.83■■■□□ 2.85
CALM3-202ENST00000391918 CUL7Q14999 1698 aa32.79■■■□□ 2.84
CALM3-202ENST00000391918 ADAMTS12P58397 1594 aa32.76■■■□□ 2.84
CALM3-202ENST00000391918 CSRNP3Q8WYN3 585 aa32.76■■■□□ 2.83
CALM3-202ENST00000391918 FHAD1B1AJZ9 1412 aa32.73■■■□□ 2.83
CALM3-202ENST00000391918 SYNJ2O15056 1496 aa32.7■■■□□ 2.83
CALM3-202ENST00000391918 CARMIL1Q5VZK9 1371 aa32.69■■■□□ 2.82
CALM3-202ENST00000391918 CHMP7Q8WUX9 453 aaPredicted RBP32.66■■■□□ 2.82
CALM3-202ENST00000391918 FBLN2P98095 1184 aa32.65■■■□□ 2.82
CALM3-202ENST00000391918 PRXQ9BXM0 1461 aa32.6■■■□□ 2.81
CALM3-202ENST00000391918 CHD1O14646 1710 aa32.6■■■□□ 2.81
CALM3-202ENST00000391918 RAPGEF2Q9Y4G8 1499 aa32.59■■■□□ 2.81
CALM3-202ENST00000391918 GRIN2AQ12879 1464 aa32.57■■■□□ 2.8
CALM3-202ENST00000391918 KIF21BO75037 1637 aa32.53■■■□□ 2.8
CALM3-202ENST00000391918 GOLGA3Q08378 1498 aa32.42■■■□□ 2.78
CALM3-202ENST00000391918 EHMT2Q96KQ7 1210 aa32.38■■■□□ 2.77
CALM3-202ENST00000391918 OSCARQ8IYS5 282 aa32.37■■■□□ 2.77
CALM3-202ENST00000391918 CEP170Q5SW79 1584 aa32.36■■■□□ 2.77
CALM3-202ENST00000391918 NUP160Q12769 1436 aa32.35■■■□□ 2.77
CALM3-202ENST00000391918 UBTFP17480 764 aaKnown RBP32.28■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms