RNA–Protein interactions for RNA: ENST00000253079.10

CCDC62-201, Transcript of coiled-coil domain containing 62, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC62, Length 3,546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62-201ENST00000253079 NISCHQ9Y2I1 1504 aa34.52■■■■□ 3.12
CCDC62-201ENST00000253079 SHROOM4Q9ULL8 1493 aa29.93■■■□□ 2.38
CCDC62-201ENST00000253079 DCAF8L2P0C7V8 631 aa29.89■■■□□ 2.38
CCDC62-201ENST00000253079 SUPT5HO00267 1087 aaKnown RBP29.59■■■□□ 2.33
CCDC62-201ENST00000253079 CCDC180Q9P1Z9 1646 aa29.21■■■□□ 2.27
CCDC62-201ENST00000253079 ZCCHC6Q5VYS8 1495 aaKnown RBP29■■■□□ 2.23
CCDC62-201ENST00000253079 PCGF6Q9BYE7 350 aa28.46■■■□□ 2.15
CCDC62-201ENST00000253079 ABCC9O60706 1549 aa28.37■■■□□ 2.13
CCDC62-201ENST00000253079 CHIC1Q5VXU3 224 aa28.29■■■□□ 2.12
CCDC62-201ENST00000253079 HRCP23327 699 aa28.22■■■□□ 2.11
CCDC62-201ENST00000253079 PPARGC1BQ86YN6 1023 aaKnown RBP28.04■■■□□ 2.08
CCDC62-201ENST00000253079 MYO15BQ96JP2 1530 aa27.96■■■□□ 2.07
CCDC62-201ENST00000253079 LOC105371045A0A1W2PR82 267 aa27.94■■■□□ 2.06
CCDC62-201ENST00000253079 SCRIBQ14160 1630 aa27.93■■■□□ 2.06
CCDC62-201ENST00000253079 DCAF1Q9Y4B6 1507 aa27.92■■■□□ 2.06
CCDC62-201ENST00000253079 EHMT2Q96KQ7 1210 aa27.74■■■□□ 2.03
CCDC62-201ENST00000253079 FAM9AQ8IZU1 332 aaPredicted RBP27.55■■■□□ 2
CCDC62-201ENST00000253079 TRIM26Q12899 539 aaPredicted RBP27.34■■□□□ 1.97
CCDC62-201ENST00000253079 NACADO15069 1562 aa27.32■■□□□ 1.96
CCDC62-201ENST00000253079 PABPN1Q86U42 306 aaKnown RBP eCLIP27.29■■□□□ 1.96
CCDC62-201ENST00000253079 RSF1Q96T23 1441 aaPredicted RBP27.27■■□□□ 1.96
CCDC62-201ENST00000253079 CECR2Q9BXF3 1484 aa27.27■■□□□ 1.96
CCDC62-201ENST00000253079 TRIM41Q8WV44 630 aa27.24■■□□□ 1.95
CCDC62-201ENST00000253079 RB1CC1Q8TDY2 1594 aa27.1■■□□□ 1.93
CCDC62-201ENST00000253079 MROH2BQ7Z745 1585 aa26.99■■□□□ 1.91
CCDC62-201ENST00000253079 ZEB1P37275 1124 aaPredicted RBP26.88■■□□□ 1.89
CCDC62-201ENST00000253079 TTBK1Q5TCY1 1321 aaPredicted RBP26.87■■□□□ 1.89
CCDC62-201ENST00000253079 WIZO95785 1651 aa26.81■■□□□ 1.88
CCDC62-201ENST00000253079 UNC13AQ9UPW8 1703 aa26.63■■□□□ 1.85
CCDC62-201ENST00000253079 CCER1Q8TC90 406 aaPredicted RBP26.62■■□□□ 1.85
CCDC62-201ENST00000253079 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.59■■□□□ 1.85
CCDC62-201ENST00000253079 BAZ1AQ9NRL2 1556 aaPredicted RBP26.51■■□□□ 1.83
CCDC62-201ENST00000253079 SCAF1Q9H7N4 1312 aaKnown RBP26.41■■□□□ 1.82
CCDC62-201ENST00000253079 BICRAQ9NZM4 1560 aa26.38■■□□□ 1.81
CCDC62-201ENST00000253079 SMARCA4P51532 1647 aa26.36■■□□□ 1.81
CCDC62-201ENST00000253079 CCDC88BA6NC98 1476 aa26.27■■□□□ 1.8
CCDC62-201ENST00000253079 PELP1Q8IZL8 1130 aaKnown RBP26.26■■□□□ 1.79
CCDC62-201ENST00000253079 ABCC8Q09428 1581 aa26.19■■□□□ 1.78
CCDC62-201ENST00000253079 TOP2AP11388 1531 aaKnown RBP26.15■■□□□ 1.78
CCDC62-201ENST00000253079 YTHDC1Q96MU7 727 aaKnown RBP26.14■■□□□ 1.78
CCDC62-201ENST00000253079 UBTFP17480 764 aaKnown RBP26.13■■□□□ 1.77
CCDC62-201ENST00000253079 DIEXFQ68CQ4 756 aaKnown RBP26.11■■□□□ 1.77
CCDC62-201ENST00000253079 SMARCA2P51531 1590 aa26.06■■□□□ 1.76
CCDC62-201ENST00000253079 CENPBP07199 599 aaPredicted RBP26.05■■□□□ 1.76
CCDC62-201ENST00000253079 NEUROD1Q13562 356 aa26.04■■□□□ 1.76
CCDC62-201ENST00000253079 RANGAP1P46060 587 aaPredicted RBP26.04■■□□□ 1.76
CCDC62-201ENST00000253079 ACIN1Q9UKV3 1341 aaKnown RBP26■■□□□ 1.75
CCDC62-201ENST00000253079 GTF3C3Q9Y5Q9 886 aa26■■□□□ 1.75
CCDC62-201ENST00000253079 ATAD2BQ9ULI0 1458 aa25.94■■□□□ 1.74
CCDC62-201ENST00000253079 BAZ1BQ9UIG0 1483 aaKnown RBP25.93■■□□□ 1.74
CCDC62-201ENST00000253079 SOGA1O94964 1423 aa25.88■■□□□ 1.73
CCDC62-201ENST00000253079 HNRNPUL2Q1KMD3 747 aaKnown RBP25.88■■□□□ 1.73
CCDC62-201ENST00000253079 RUSC2Q8N2Y8 1516 aa25.81■■□□□ 1.72
CCDC62-201ENST00000253079 EIF4G1Q04637 1599 aaKnown RBP25.8■■□□□ 1.72
CCDC62-201ENST00000253079 APLP2Q06481 763 aa25.71■■□□□ 1.71
CCDC62-201ENST00000253079 CSRNP3Q8WYN3 585 aa25.7■■□□□ 1.7
CCDC62-201ENST00000253079 WRNQ14191 1432 aaPredicted RBP eCLIP25.69■■□□□ 1.7
CCDC62-201ENST00000253079 ZNF316A6NFI3 1004 aaPredicted RBP25.63■■□□□ 1.69
CCDC62-201ENST00000253079 PEG3Q9GZU2 1588 aa25.6■■□□□ 1.69
CCDC62-201ENST00000253079 CEP162Q5TB80 1403 aa25.57■■□□□ 1.68
CCDC62-201ENST00000253079 SYNJ1O43426 1573 aa25.49■■□□□ 1.67
CCDC62-201ENST00000253079 MIER1Q8N108 512 aa25.45■■□□□ 1.66
CCDC62-201ENST00000253079 NCAPD3P42695 1498 aa25.39■■□□□ 1.65
CCDC62-201ENST00000253079 DNAJC5BQ9UF47 199 aa25.34■■□□□ 1.65
CCDC62-201ENST00000253079 TNIKQ9UKE5 1360 aa25.32■■□□□ 1.64
CCDC62-201ENST00000253079 ITGAEP38570 1179 aa25.27■■□□□ 1.64
CCDC62-201ENST00000253079 CC2D2AQ9P2K1 1620 aa25.21■■□□□ 1.63
CCDC62-201ENST00000253079 GOLGA3Q08378 1498 aa25.21■■□□□ 1.63
CCDC62-201ENST00000253079 HMGXB3Q12766 1538 aa25.19■■□□□ 1.62
CCDC62-201ENST00000253079 RAPGEF2Q9Y4G8 1499 aa25.19■■□□□ 1.62
CCDC62-201ENST00000253079 EEA1Q15075 1411 aa25.18■■□□□ 1.62
CCDC62-201ENST00000253079 CLIP1P30622 1438 aa25.1■■□□□ 1.61
CCDC62-201ENST00000253079 CUX1P39880 1505 aa25.1■■□□□ 1.61
CCDC62-201ENST00000253079 CFTRP13569 1480 aa25.09■■□□□ 1.61
CCDC62-201ENST00000253079 CEP164Q9UPV0 1460 aa25.09■■□□□ 1.61
CCDC62-201ENST00000253079 CADPSQ9ULU8 1353 aa25.07■■□□□ 1.6
CCDC62-201ENST00000253079 NESP48681 1621 aa25.06■■□□□ 1.6
CCDC62-201ENST00000253079 TOP2BQ02880 1626 aa25.05■■□□□ 1.6
CCDC62-201ENST00000253079 MYT1Q01538 1121 aa24.99■■□□□ 1.59
CCDC62-201ENST00000253079 P3H3Q8IVL6 736 aa24.96■■□□□ 1.59
CCDC62-201ENST00000253079 ATP1B4Q9UN42 357 aaPredicted RBP24.96■■□□□ 1.59
CCDC62-201ENST00000253079 BCANQ96GW7 911 aa24.93■■□□□ 1.58
CCDC62-201ENST00000253079 CUX2O14529 1486 aa24.93■■□□□ 1.58
CCDC62-201ENST00000253079 KIF27Q86VH2 1401 aa24.92■■□□□ 1.58
CCDC62-201ENST00000253079 FANCD2Q9BXW9 1451 aa24.86■■□□□ 1.57
CCDC62-201ENST00000253079 BIVM-ERCC5R4GMW8 1640 aa24.84■■□□□ 1.57
CCDC62-201ENST00000253079 KIF21BO75037 1637 aa24.83■■□□□ 1.57
CCDC62-201ENST00000253079 FGD5Q6ZNL6 1462 aa24.82■■□□□ 1.56
CCDC62-201ENST00000253079 RAD54L2Q9Y4B4 1467 aa24.81■■□□□ 1.56
CCDC62-201ENST00000253079 VPS8Q8N3P4 1428 aa24.8■■□□□ 1.56
CCDC62-201ENST00000253079 KANK4Q5T7N3 995 aaPredicted RBP24.79■■□□□ 1.56
CCDC62-201ENST00000253079 IGF1RP08069 1367 aa24.75■■□□□ 1.55
CCDC62-201ENST00000253079 PRXQ9BXM0 1461 aa24.74■■□□□ 1.55
CCDC62-201ENST00000253079 CARMIL1Q5VZK9 1371 aa24.7■■□□□ 1.54
CCDC62-201ENST00000253079 TDRD9Q8NDG6 1382 aaKnown RBP24.68■■□□□ 1.54
CCDC62-201ENST00000253079 FAM50AQ14320 339 aaKnown RBP24.68■■□□□ 1.54
CCDC62-201ENST00000253079 SUPT16HQ9Y5B9 1047 aaKnown RBP24.67■■□□□ 1.54
CCDC62-201ENST00000253079 HIRIP3Q9BW71 556 aaPredicted RBP24.63■■□□□ 1.53
CCDC62-201ENST00000253079 ARAP1Q96P48 1450 aa24.63■■□□□ 1.53
CCDC62-201ENST00000253079 DDX10Q13206 875 aaKnown RBP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms