RNA–Protein interactions for RNA: ENST00000379888.8

RBM17-201, Transcript of RNA binding motif protein 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM17, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM17-201ENST00000379888 NISCHQ9Y2I1 1504 aa37.73■■■■□ 3.63
RBM17-201ENST00000379888 SHROOM4Q9ULL8 1493 aa32.57■■■□□ 2.8
RBM17-201ENST00000379888 DCAF8L2P0C7V8 631 aa32.33■■■□□ 2.77
RBM17-201ENST00000379888 CCDC180Q9P1Z9 1646 aa31.98■■■□□ 2.71
RBM17-201ENST00000379888 ZCCHC6Q5VYS8 1495 aaKnown RBP31.74■■■□□ 2.67
RBM17-201ENST00000379888 SUPT5HO00267 1087 aaKnown RBP31.67■■■□□ 2.66
RBM17-201ENST00000379888 ABCC9O60706 1549 aa30.82■■■□□ 2.52
RBM17-201ENST00000379888 DCAF1Q9Y4B6 1507 aa30.59■■■□□ 2.49
RBM17-201ENST00000379888 SCRIBQ14160 1630 aa30.47■■■□□ 2.47
RBM17-201ENST00000379888 CHIC1Q5VXU3 224 aa30.18■■■□□ 2.42
RBM17-201ENST00000379888 MYO15BQ96JP2 1530 aa29.96■■■□□ 2.39
RBM17-201ENST00000379888 NACADO15069 1562 aa29.83■■■□□ 2.37
RBM17-201ENST00000379888 RSF1Q96T23 1441 aaPredicted RBP29.8■■■□□ 2.36
RBM17-201ENST00000379888 CECR2Q9BXF3 1484 aa29.76■■■□□ 2.35
RBM17-201ENST00000379888 PABPN1Q86U42 306 aaKnown RBP eCLIP29.6■■■□□ 2.33
RBM17-201ENST00000379888 LOC105371045A0A1W2PR82 267 aa29.59■■■□□ 2.33
RBM17-201ENST00000379888 RB1CC1Q8TDY2 1594 aa29.55■■■□□ 2.32
RBM17-201ENST00000379888 EHMT2Q96KQ7 1210 aa29.5■■■□□ 2.31
RBM17-201ENST00000379888 MROH2BQ7Z745 1585 aa29.48■■■□□ 2.31
RBM17-201ENST00000379888 FAM9AQ8IZU1 332 aaPredicted RBP29.41■■■□□ 2.3
RBM17-201ENST00000379888 WIZO95785 1651 aa29.3■■■□□ 2.28
RBM17-201ENST00000379888 TRIM41Q8WV44 630 aa29.29■■■□□ 2.28
RBM17-201ENST00000379888 UNC13AQ9UPW8 1703 aa29.13■■■□□ 2.25
RBM17-201ENST00000379888 PCGF6Q9BYE7 350 aa29■■■□□ 2.23
RBM17-201ENST00000379888 BAZ1AQ9NRL2 1556 aaPredicted RBP28.96■■■□□ 2.23
RBM17-201ENST00000379888 BICRAQ9NZM4 1560 aa28.84■■■□□ 2.21
RBM17-201ENST00000379888 HRCP23327 699 aa28.84■■■□□ 2.21
RBM17-201ENST00000379888 SMARCA4P51532 1647 aa28.83■■■□□ 2.21
RBM17-201ENST00000379888 CCDC88BA6NC98 1476 aa28.69■■■□□ 2.18
RBM17-201ENST00000379888 ABCC8Q09428 1581 aa28.61■■■□□ 2.17
RBM17-201ENST00000379888 TOP2AP11388 1531 aaKnown RBP28.61■■■□□ 2.17
RBM17-201ENST00000379888 PPARGC1BQ86YN6 1023 aaKnown RBP28.58■■■□□ 2.17
RBM17-201ENST00000379888 SMARCA2P51531 1590 aa28.51■■■□□ 2.16
RBM17-201ENST00000379888 EIF4G1Q04637 1599 aaKnown RBP28.35■■■□□ 2.13
RBM17-201ENST00000379888 TTBK1Q5TCY1 1321 aaPredicted RBP28.33■■■□□ 2.13
RBM17-201ENST00000379888 ATAD2BQ9ULI0 1458 aa28.3■■■□□ 2.12
RBM17-201ENST00000379888 SOGA1O94964 1423 aa28.25■■■□□ 2.11
RBM17-201ENST00000379888 BAZ1BQ9UIG0 1483 aaKnown RBP28.25■■■□□ 2.11
RBM17-201ENST00000379888 TRIM26Q12899 539 aaPredicted RBP28.2■■■□□ 2.11
RBM17-201ENST00000379888 RUSC2Q8N2Y8 1516 aa28.18■■■□□ 2.1
RBM17-201ENST00000379888 RANGAP1P46060 587 aaPredicted RBP28.1■■■□□ 2.09
RBM17-201ENST00000379888 UBTFP17480 764 aaKnown RBP28.09■■■□□ 2.09
RBM17-201ENST00000379888 PEG3Q9GZU2 1588 aa28.04■■■□□ 2.08
RBM17-201ENST00000379888 WRNQ14191 1432 aaPredicted RBP eCLIP28.03■■■□□ 2.08
RBM17-201ENST00000379888 CSRNP3Q8WYN3 585 aa27.98■■■□□ 2.07
RBM17-201ENST00000379888 SYNJ1O43426 1573 aa27.89■■■□□ 2.06
RBM17-201ENST00000379888 CEP162Q5TB80 1403 aa27.76■■■□□ 2.03
RBM17-201ENST00000379888 NCAPD3P42695 1498 aa27.7■■■□□ 2.03
RBM17-201ENST00000379888 TNIKQ9UKE5 1360 aa27.59■■■□□ 2.01
RBM17-201ENST00000379888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.58■■■□□ 2.01
RBM17-201ENST00000379888 GOLGA3Q08378 1498 aa27.55■■■□□ 2
RBM17-201ENST00000379888 HMGXB3Q12766 1538 aa27.55■■■□□ 2
RBM17-201ENST00000379888 EEA1Q15075 1411 aa27.53■■■□□ 2
RBM17-201ENST00000379888 RAPGEF2Q9Y4G8 1499 aa27.51■■□□□ 1.99
RBM17-201ENST00000379888 DNAJC5BQ9UF47 199 aa27.51■■□□□ 1.99
RBM17-201ENST00000379888 CC2D2AQ9P2K1 1620 aa27.47■■□□□ 1.99
RBM17-201ENST00000379888 CUX1P39880 1505 aa27.44■■□□□ 1.98
RBM17-201ENST00000379888 CEP164Q9UPV0 1460 aa27.41■■□□□ 1.98
RBM17-201ENST00000379888 TOP2BQ02880 1626 aa27.41■■□□□ 1.98
RBM17-201ENST00000379888 CFTRP13569 1480 aa27.4■■□□□ 1.98
RBM17-201ENST00000379888 CLIP1P30622 1438 aa27.36■■□□□ 1.97
RBM17-201ENST00000379888 CCER1Q8TC90 406 aaPredicted RBP27.34■■□□□ 1.97
RBM17-201ENST00000379888 PELP1Q8IZL8 1130 aaKnown RBP27.32■■□□□ 1.96
RBM17-201ENST00000379888 CADPSQ9ULU8 1353 aa27.31■■□□□ 1.96
RBM17-201ENST00000379888 NESP48681 1621 aa27.28■■□□□ 1.96
RBM17-201ENST00000379888 HNRNPUL2Q1KMD3 747 aaKnown RBP27.26■■□□□ 1.96
RBM17-201ENST00000379888 BIVM-ERCC5R4GMW8 1640 aa27.21■■□□□ 1.95
RBM17-201ENST00000379888 KIF21BO75037 1637 aa27.21■■□□□ 1.95
RBM17-201ENST00000379888 APLP2Q06481 763 aa27.21■■□□□ 1.95
RBM17-201ENST00000379888 KIF27Q86VH2 1401 aa27.17■■□□□ 1.94
RBM17-201ENST00000379888 CUX2O14529 1486 aa27.16■■□□□ 1.94
RBM17-201ENST00000379888 ZEB1P37275 1124 aaPredicted RBP27.16■■□□□ 1.94
RBM17-201ENST00000379888 SCAF1Q9H7N4 1312 aaKnown RBP27.12■■□□□ 1.93
RBM17-201ENST00000379888 FANCD2Q9BXW9 1451 aa27.09■■□□□ 1.93
RBM17-201ENST00000379888 P3H3Q8IVL6 736 aa27.09■■□□□ 1.93
RBM17-201ENST00000379888 FGD5Q6ZNL6 1462 aa27.08■■□□□ 1.93
RBM17-201ENST00000379888 PRXQ9BXM0 1461 aa27.06■■□□□ 1.92
RBM17-201ENST00000379888 VPS8Q8N3P4 1428 aa27.04■■□□□ 1.92
RBM17-201ENST00000379888 RAD54L2Q9Y4B4 1467 aa27.03■■□□□ 1.92
RBM17-201ENST00000379888 KANK4Q5T7N3 995 aaPredicted RBP27■■□□□ 1.91
RBM17-201ENST00000379888 IGF1RP08069 1367 aa26.99■■□□□ 1.91
RBM17-201ENST00000379888 ATP1B4Q9UN42 357 aaPredicted RBP26.99■■□□□ 1.91
RBM17-201ENST00000379888 ARAP1Q96P48 1450 aa26.92■■□□□ 1.9
RBM17-201ENST00000379888 CARMIL1Q5VZK9 1371 aa26.9■■□□□ 1.9
RBM17-201ENST00000379888 ITGAEP38570 1179 aa26.9■■□□□ 1.9
RBM17-201ENST00000379888 ERICH3Q5RHP9 1530 aa26.85■■□□□ 1.89
RBM17-201ENST00000379888 PRDM2Q13029 1718 aa26.85■■□□□ 1.89
RBM17-201ENST00000379888 TDRD9Q8NDG6 1382 aaKnown RBP26.83■■□□□ 1.89
RBM17-201ENST00000379888 TOPBP1Q92547 1522 aa26.8■■□□□ 1.88
RBM17-201ENST00000379888 POLA1P09884 1462 aaPredicted RBP26.8■■□□□ 1.88
RBM17-201ENST00000379888 ARHGAP35Q9NRY4 1499 aa26.77■■□□□ 1.88
RBM17-201ENST00000379888 URB2Q14146 1524 aaKnown RBP26.72■■□□□ 1.87
RBM17-201ENST00000379888 DNMBPQ6XZF7 1577 aa26.68■■□□□ 1.86
RBM17-201ENST00000379888 FHOD3Q2V2M9 1422 aa26.59■■□□□ 1.85
RBM17-201ENST00000379888 PDS5BQ9NTI5 1447 aa26.58■■□□□ 1.85
RBM17-201ENST00000379888 NEUROD1Q13562 356 aa26.56■■□□□ 1.84
RBM17-201ENST00000379888 ABCA10Q8WWZ4 1543 aa26.55■■□□□ 1.84
RBM17-201ENST00000379888 LAMC3Q9Y6N6 1575 aa26.55■■□□□ 1.84
RBM17-201ENST00000379888 ARID3CA6NKF2 412 aa26.54■■□□□ 1.84
RBM17-201ENST00000379888 KIF21AQ7Z4S6 1674 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms