Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.47■■□□□ 1.51
CHD8Q9HCK8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.46■■□□□ 1.51
CHD8Q9HCK8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.46■■□□□ 1.51
CHD8Q9HCK8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.45■■□□□ 1.5
CHD8Q9HCK8 DUX4L9-201ENST00000449051 1259 ntBASIC24.45■■□□□ 1.5
CHD8Q9HCK8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHD8Q9HCK8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.45■■□□□ 1.5
CHD8Q9HCK8 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHD8Q9HCK8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CHD8Q9HCK8 AC008406.3-201ENST00000620001 1374 ntBASIC24.44■■□□□ 1.5
CHD8Q9HCK8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHD8Q9HCK8 AC133552.2-201ENST00000619106 1032 ntBASIC24.43■■□□□ 1.5
CHD8Q9HCK8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHD8Q9HCK8 ECEL1P2-201ENST00000461596 1295 ntBASIC24.43■■□□□ 1.5
CHD8Q9HCK8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.43■■□□□ 1.5
CHD8Q9HCK8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CHD8Q9HCK8 AC010980.1-201ENST00000587192 1142 ntBASIC24.42■■□□□ 1.5
CHD8Q9HCK8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHD8Q9HCK8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CHD8Q9HCK8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD8Q9HCK8 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD8Q9HCK8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD8Q9HCK8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CHD8Q9HCK8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
CHD8Q9HCK8 AC009831.1-201ENST00000580420 1582 ntBASIC24.39■■□□□ 1.49
CHD8Q9HCK8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.39■■□□□ 1.49
CHD8Q9HCK8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHD8Q9HCK8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.38■■□□□ 1.49
CHD8Q9HCK8 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHD8Q9HCK8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHD8Q9HCK8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.37■■□□□ 1.49
CHD8Q9HCK8 MIR219A2-201ENST00000608502 1504 ntBASIC24.37■■□□□ 1.49
CHD8Q9HCK8 MIR638-201ENST00000385237 100 ntBASIC24.37■■□□□ 1.49
CHD8Q9HCK8 AC007029.1-201ENST00000604183 313 ntBASIC24.37■■□□□ 1.49
CHD8Q9HCK8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
CHD8Q9HCK8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CHD8Q9HCK8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHD8Q9HCK8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
CHD8Q9HCK8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.36■■□□□ 1.49
CHD8Q9HCK8 AL157400.5-201ENST00000507624 621 ntBASIC24.36■■□□□ 1.49
CHD8Q9HCK8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHD8Q9HCK8 AL592293.1-201ENST00000502889 1188 ntBASIC24.35■■□□□ 1.49
CHD8Q9HCK8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.35■■□□□ 1.49
CHD8Q9HCK8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CHD8Q9HCK8 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
CHD8Q9HCK8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
CHD8Q9HCK8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHD8Q9HCK8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.34■■□□□ 1.49
CHD8Q9HCK8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.34■■□□□ 1.49
CHD8Q9HCK8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHD8Q9HCK8 YBX1P4-201ENST00000392794 808 ntBASIC24.33■■□□□ 1.49
CHD8Q9HCK8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.33■■□□□ 1.49
CHD8Q9HCK8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.33■■□□□ 1.49
CHD8Q9HCK8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
CHD8Q9HCK8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHD8Q9HCK8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHD8Q9HCK8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CHD8Q9HCK8 SPCS2P3-201ENST00000500401 656 ntBASIC24.32■■□□□ 1.48
CHD8Q9HCK8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.31■■□□□ 1.48
CHD8Q9HCK8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
CHD8Q9HCK8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHD8Q9HCK8 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHD8Q9HCK8 AC103834.1-201ENST00000520383 144 ntBASIC24.3■■□□□ 1.48
CHD8Q9HCK8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.3■■□□□ 1.48
CHD8Q9HCK8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.3■■□□□ 1.48
CHD8Q9HCK8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.3■■□□□ 1.48
CHD8Q9HCK8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD8Q9HCK8 BHLHE23-202ENST00000612929 1109 ntBASIC24.29■■□□□ 1.48
CHD8Q9HCK8 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.29■■□□□ 1.48
CHD8Q9HCK8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD8Q9HCK8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHD8Q9HCK8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.28■■□□□ 1.48
CHD8Q9HCK8 SMPD5-203ENST00000639008 1464 ntBASIC24.28■■□□□ 1.48
CHD8Q9HCK8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
CHD8Q9HCK8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CHD8Q9HCK8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHD8Q9HCK8 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC24.27■■□□□ 1.48
CHD8Q9HCK8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CHD8Q9HCK8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.27■■□□□ 1.48
CHD8Q9HCK8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.26■■□□□ 1.47
CHD8Q9HCK8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.26■■□□□ 1.47
CHD8Q9HCK8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
CHD8Q9HCK8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.26■■□□□ 1.47
CHD8Q9HCK8 AC103724.3-201ENST00000564481 992 ntBASIC24.26■■□□□ 1.47
CHD8Q9HCK8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD8Q9HCK8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD8Q9HCK8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD8Q9HCK8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD8Q9HCK8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.25■■□□□ 1.47
CHD8Q9HCK8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.25■■□□□ 1.47
CHD8Q9HCK8 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.25■■□□□ 1.47
CHD8Q9HCK8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHD8Q9HCK8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
CHD8Q9HCK8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CHD8Q9HCK8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHD8Q9HCK8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.23■■□□□ 1.47
CHD8Q9HCK8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHD8Q9HCK8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHD8Q9HCK8 MIR6765-201ENST00000614092 87 ntBASIC24.22■■□□□ 1.47
CHD8Q9HCK8 AC074183.2-201ENST00000623112 922 ntBASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms