Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
LRRC40Q9H9A6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
LRRC40Q9H9A6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
LRRC40Q9H9A6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
LRRC40Q9H9A6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
LRRC40Q9H9A6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.78■■□□□ 1.72
LRRC40Q9H9A6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
LRRC40Q9H9A6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
LRRC40Q9H9A6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
LRRC40Q9H9A6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
LRRC40Q9H9A6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LRRC40Q9H9A6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.77■■□□□ 1.72
LRRC40Q9H9A6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.72
LRRC40Q9H9A6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
LRRC40Q9H9A6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.76■■□□□ 1.71
LRRC40Q9H9A6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
LRRC40Q9H9A6 LINC01003-201ENST00000564834 1764 ntBASIC25.75■■□□□ 1.71
LRRC40Q9H9A6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.75■■□□□ 1.71
LRRC40Q9H9A6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.75■■□□□ 1.71
LRRC40Q9H9A6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.74■■□□□ 1.71
LRRC40Q9H9A6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
LRRC40Q9H9A6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
LRRC40Q9H9A6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
LRRC40Q9H9A6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
LRRC40Q9H9A6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.73■■□□□ 1.71
LRRC40Q9H9A6 DUX4L29-201ENST00000425409 679 ntBASIC25.73■■□□□ 1.71
LRRC40Q9H9A6 RPS2P35-201ENST00000443417 897 ntBASIC25.73■■□□□ 1.71
LRRC40Q9H9A6 AC021231.2-201ENST00000594613 730 ntBASIC25.73■■□□□ 1.71
LRRC40Q9H9A6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
LRRC40Q9H9A6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
LRRC40Q9H9A6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
LRRC40Q9H9A6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LRRC40Q9H9A6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LRRC40Q9H9A6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
LRRC40Q9H9A6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
LRRC40Q9H9A6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.71■■□□□ 1.71
LRRC40Q9H9A6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
LRRC40Q9H9A6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
LRRC40Q9H9A6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
LRRC40Q9H9A6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
LRRC40Q9H9A6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
LRRC40Q9H9A6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
LRRC40Q9H9A6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
LRRC40Q9H9A6 AL121749.1-202ENST00000609313 2153 ntBASIC25.69■■□□□ 1.7
LRRC40Q9H9A6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
LRRC40Q9H9A6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.68■■□□□ 1.7
LRRC40Q9H9A6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.68■■□□□ 1.7
LRRC40Q9H9A6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.68■■□□□ 1.7
LRRC40Q9H9A6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
LRRC40Q9H9A6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LRRC40Q9H9A6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
LRRC40Q9H9A6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.67■■□□□ 1.7
LRRC40Q9H9A6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
LRRC40Q9H9A6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
LRRC40Q9H9A6 AC018358.1-201ENST00000631079 1402 ntBASIC25.66■■□□□ 1.7
LRRC40Q9H9A6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LRRC40Q9H9A6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.66■■□□□ 1.7
LRRC40Q9H9A6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LRRC40Q9H9A6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LRRC40Q9H9A6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
LRRC40Q9H9A6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.63■■□□□ 1.69
LRRC40Q9H9A6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LRRC40Q9H9A6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LRRC40Q9H9A6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.63■■□□□ 1.69
LRRC40Q9H9A6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
LRRC40Q9H9A6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.62■■□□□ 1.69
LRRC40Q9H9A6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
LRRC40Q9H9A6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LRRC40Q9H9A6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
LRRC40Q9H9A6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
LRRC40Q9H9A6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
LRRC40Q9H9A6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
LRRC40Q9H9A6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
LRRC40Q9H9A6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
LRRC40Q9H9A6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
LRRC40Q9H9A6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
LRRC40Q9H9A6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
LRRC40Q9H9A6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
LRRC40Q9H9A6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
LRRC40Q9H9A6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
LRRC40Q9H9A6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
LRRC40Q9H9A6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
LRRC40Q9H9A6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
LRRC40Q9H9A6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.58■■□□□ 1.69
LRRC40Q9H9A6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.58■■□□□ 1.69
LRRC40Q9H9A6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
LRRC40Q9H9A6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
LRRC40Q9H9A6 AC110285.7-201ENST00000624417 1536 ntBASIC25.58■■□□□ 1.68
LRRC40Q9H9A6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
LRRC40Q9H9A6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
LRRC40Q9H9A6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.57■■□□□ 1.68
LRRC40Q9H9A6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.57■■□□□ 1.68
LRRC40Q9H9A6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
LRRC40Q9H9A6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.56■■□□□ 1.68
LRRC40Q9H9A6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.56■■□□□ 1.68
LRRC40Q9H9A6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
LRRC40Q9H9A6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.55■■□□□ 1.68
LRRC40Q9H9A6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.55■■□□□ 1.68
LRRC40Q9H9A6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
LRRC40Q9H9A6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms