Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
ZNF428Q96B54 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
ZNF428Q96B54 DUX4L13-201ENST00000554103 1267 ntBASIC32.92■■■□□ 2.86
ZNF428Q96B54 DUX4L15-201ENST00000611059 1267 ntBASIC32.92■■■□□ 2.86
ZNF428Q96B54 DUX4L23-201ENST00000615195 1269 ntBASIC32.92■■■□□ 2.86
ZNF428Q96B54 DUX4L24-201ENST00000617576 1269 ntBASIC32.92■■■□□ 2.86
ZNF428Q96B54 DUX4L22-201ENST00000618238 1269 ntBASIC32.92■■■□□ 2.86
ZNF428Q96B54 DUX4L20-201ENST00000619712 1269 ntBASIC32.92■■■□□ 2.86
ZNF428Q96B54 DUX4L21-201ENST00000622058 1269 ntBASIC32.92■■■□□ 2.86
ZNF428Q96B54 DUX4L10-201ENST00000622460 1267 ntBASIC32.92■■■□□ 2.86
ZNF428Q96B54 DUX4L25-201ENST00000624915 1269 ntBASIC32.92■■■□□ 2.86
ZNF428Q96B54 CHML-204ENST00000638121 920 ntTSL 2 BASIC32.92■■■□□ 2.86
ZNF428Q96B54 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
ZNF428Q96B54 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC32.92■■■□□ 2.86
ZNF428Q96B54 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC32.92■■■□□ 2.86
ZNF428Q96B54 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
ZNF428Q96B54 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
ZNF428Q96B54 DRD5P2-201ENST00000421395 2012 ntBASIC32.89■■■□□ 2.86
ZNF428Q96B54 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC32.89■■■□□ 2.86
ZNF428Q96B54 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
ZNF428Q96B54 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC32.89■■■□□ 2.86
ZNF428Q96B54 PROC-203ENST00000409048 1586 ntTSL 5 BASIC32.89■■■□□ 2.86
ZNF428Q96B54 HES6-205ENST00000409356 528 ntTSL 2 BASIC32.89■■■□□ 2.86
ZNF428Q96B54 AGPS-202ENST00000409888 815 ntTSL 4 BASIC32.89■■■□□ 2.86
ZNF428Q96B54 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC32.88■■■□□ 2.85
ZNF428Q96B54 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
ZNF428Q96B54 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC32.87■■■□□ 2.85
ZNF428Q96B54 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC32.87■■■□□ 2.85
ZNF428Q96B54 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
ZNF428Q96B54 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
ZNF428Q96B54 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC32.86■■■□□ 2.85
ZNF428Q96B54 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC32.86■■■□□ 2.85
ZNF428Q96B54 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
ZNF428Q96B54 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
ZNF428Q96B54 SHF-206ENST00000560471 2499 ntTSL 5 BASIC32.85■■■□□ 2.85
ZNF428Q96B54 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
ZNF428Q96B54 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC32.84■■■□□ 2.85
ZNF428Q96B54 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC32.84■■■□□ 2.85
ZNF428Q96B54 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC32.84■■■□□ 2.85
ZNF428Q96B54 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC32.84■■■□□ 2.85
ZNF428Q96B54 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
ZNF428Q96B54 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC32.83■■■□□ 2.85
ZNF428Q96B54 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
ZNF428Q96B54 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
ZNF428Q96B54 CHST11-202ENST00000546689 756 ntTSL 2 BASIC32.81■■■□□ 2.84
ZNF428Q96B54 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC32.81■■■□□ 2.84
ZNF428Q96B54 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
ZNF428Q96B54 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
ZNF428Q96B54 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
ZNF428Q96B54 AP002414.2-202ENST00000590929 1450 ntBASIC32.8■■■□□ 2.84
ZNF428Q96B54 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
ZNF428Q96B54 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC32.79■■■□□ 2.84
ZNF428Q96B54 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
ZNF428Q96B54 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
ZNF428Q96B54 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC32.78■■■□□ 2.84
ZNF428Q96B54 AC142086.6-201ENST00000621154 1765 ntBASIC32.78■■■□□ 2.84
ZNF428Q96B54 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
ZNF428Q96B54 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
ZNF428Q96B54 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
ZNF428Q96B54 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
ZNF428Q96B54 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC32.75■■■□□ 2.83
ZNF428Q96B54 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC32.75■■■□□ 2.83
ZNF428Q96B54 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC32.74■■■□□ 2.83
ZNF428Q96B54 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC32.74■■■□□ 2.83
ZNF428Q96B54 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC32.74■■■□□ 2.83
ZNF428Q96B54 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC32.74■■■□□ 2.83
ZNF428Q96B54 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC32.74■■■□□ 2.83
ZNF428Q96B54 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
ZNF428Q96B54 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
ZNF428Q96B54 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
ZNF428Q96B54 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
ZNF428Q96B54 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
ZNF428Q96B54 HSD17B1P1-201ENST00000590052 955 ntBASIC32.73■■■□□ 2.83
ZNF428Q96B54 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC32.72■■■□□ 2.83
ZNF428Q96B54 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
ZNF428Q96B54 ABHD17AP3-201ENST00000503096 1137 ntBASIC32.72■■■□□ 2.83
ZNF428Q96B54 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC32.72■■■□□ 2.83
ZNF428Q96B54 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC32.72■■■□□ 2.83
ZNF428Q96B54 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
ZNF428Q96B54 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC32.69■■■□□ 2.82
ZNF428Q96B54 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
ZNF428Q96B54 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC32.69■■■□□ 2.82
ZNF428Q96B54 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC32.69■■■□□ 2.82
ZNF428Q96B54 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
ZNF428Q96B54 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
ZNF428Q96B54 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
ZNF428Q96B54 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC32.68■■■□□ 2.82
ZNF428Q96B54 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC32.67■■■□□ 2.82
ZNF428Q96B54 AC110285.7-201ENST00000624417 1536 ntBASIC32.67■■■□□ 2.82
ZNF428Q96B54 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
ZNF428Q96B54 PEX7-203ENST00000541292 945 ntTSL 5 BASIC32.66■■■□□ 2.82
ZNF428Q96B54 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
ZNF428Q96B54 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
ZNF428Q96B54 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
ZNF428Q96B54 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC32.65■■■□□ 2.82
ZNF428Q96B54 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC32.65■■■□□ 2.82
ZNF428Q96B54 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
ZNF428Q96B54 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC32.65■■■□□ 2.82
ZNF428Q96B54 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC32.64■■■□□ 2.82
ZNF428Q96B54 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC32.64■■■□□ 2.82
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms