Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMIM4Q8WVI0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMIM4Q8WVI0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.74■■□□□ 1.07
SMIM4Q8WVI0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMIM4Q8WVI0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.74■■□□□ 1.07
SMIM4Q8WVI0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SMIM4Q8WVI0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.74■■□□□ 1.07
SMIM4Q8WVI0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.73■■□□□ 1.07
SMIM4Q8WVI0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMIM4Q8WVI0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMIM4Q8WVI0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMIM4Q8WVI0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SMIM4Q8WVI0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMIM4Q8WVI0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.72■■□□□ 1.07
SMIM4Q8WVI0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SMIM4Q8WVI0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMIM4Q8WVI0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMIM4Q8WVI0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SMIM4Q8WVI0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.71■■□□□ 1.07
SMIM4Q8WVI0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMIM4Q8WVI0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMIM4Q8WVI0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SMIM4Q8WVI0 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC21.7■■□□□ 1.06
SMIM4Q8WVI0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM4Q8WVI0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SMIM4Q8WVI0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.69■■□□□ 1.06
SMIM4Q8WVI0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM4Q8WVI0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM4Q8WVI0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM4Q8WVI0 AC093323.1-202ENST00000635031 2045 ntBASIC21.68■■□□□ 1.06
SMIM4Q8WVI0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.68■■□□□ 1.06
SMIM4Q8WVI0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM4Q8WVI0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM4Q8WVI0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.68■■□□□ 1.06
SMIM4Q8WVI0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM4Q8WVI0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM4Q8WVI0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM4Q8WVI0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.66■■□□□ 1.06
SMIM4Q8WVI0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SMIM4Q8WVI0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM4Q8WVI0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM4Q8WVI0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.66■■□□□ 1.06
SMIM4Q8WVI0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMIM4Q8WVI0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMIM4Q8WVI0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMIM4Q8WVI0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMIM4Q8WVI0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SMIM4Q8WVI0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMIM4Q8WVI0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.64■■□□□ 1.06
SMIM4Q8WVI0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SMIM4Q8WVI0 AC100797.4-201ENST00000631653 1827 ntBASIC21.64■■□□□ 1.06
SMIM4Q8WVI0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMIM4Q8WVI0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SMIM4Q8WVI0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SMIM4Q8WVI0 AC127502.1-201ENST00000399971 1502 ntBASIC21.63■■□□□ 1.05
SMIM4Q8WVI0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
SMIM4Q8WVI0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SMIM4Q8WVI0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMIM4Q8WVI0 AP002414.2-202ENST00000590929 1450 ntBASIC21.62■■□□□ 1.05
SMIM4Q8WVI0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
SMIM4Q8WVI0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMIM4Q8WVI0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMIM4Q8WVI0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SMIM4Q8WVI0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.6■■□□□ 1.05
SMIM4Q8WVI0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMIM4Q8WVI0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMIM4Q8WVI0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
SMIM4Q8WVI0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMIM4Q8WVI0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMIM4Q8WVI0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMIM4Q8WVI0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SMIM4Q8WVI0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMIM4Q8WVI0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
SMIM4Q8WVI0 DUSP8P4-201ENST00000399538 1761 ntBASIC21.56■■□□□ 1.04
SMIM4Q8WVI0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.56■■□□□ 1.04
SMIM4Q8WVI0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SMIM4Q8WVI0 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMIM4Q8WVI0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SMIM4Q8WVI0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.55■■□□□ 1.04
SMIM4Q8WVI0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMIM4Q8WVI0 AL133380.1-201ENST00000506013 324 ntBASIC21.55■■□□□ 1.04
SMIM4Q8WVI0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMIM4Q8WVI0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.55■■□□□ 1.04
SMIM4Q8WVI0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMIM4Q8WVI0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMIM4Q8WVI0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SMIM4Q8WVI0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMIM4Q8WVI0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMIM4Q8WVI0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMIM4Q8WVI0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMIM4Q8WVI0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMIM4Q8WVI0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMIM4Q8WVI0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.52■■□□□ 1.04
SMIM4Q8WVI0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMIM4Q8WVI0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SMIM4Q8WVI0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMIM4Q8WVI0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
SMIM4Q8WVI0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.52■■□□□ 1.03
SMIM4Q8WVI0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.51■■□□□ 1.03
SMIM4Q8WVI0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms