Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF439Q8NDP4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
ZNF439Q8NDP4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF439Q8NDP4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.89■□□□□ 0.93
ZNF439Q8NDP4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.89■□□□□ 0.93
ZNF439Q8NDP4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF439Q8NDP4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF439Q8NDP4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ZNF439Q8NDP4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.88■□□□□ 0.93
ZNF439Q8NDP4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF439Q8NDP4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF439Q8NDP4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.88■□□□□ 0.93
ZNF439Q8NDP4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.87■□□□□ 0.93
ZNF439Q8NDP4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF439Q8NDP4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF439Q8NDP4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF439Q8NDP4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF439Q8NDP4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF439Q8NDP4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF439Q8NDP4 AP002414.2-202ENST00000590929 1450 ntBASIC20.86■□□□□ 0.93
ZNF439Q8NDP4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.85■□□□□ 0.93
ZNF439Q8NDP4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF439Q8NDP4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ZNF439Q8NDP4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.85■□□□□ 0.93
ZNF439Q8NDP4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF439Q8NDP4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF439Q8NDP4 RPS2P35-201ENST00000443417 897 ntBASIC20.84■□□□□ 0.93
ZNF439Q8NDP4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.83■□□□□ 0.93
ZNF439Q8NDP4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF439Q8NDP4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF439Q8NDP4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF439Q8NDP4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF439Q8NDP4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.82■□□□□ 0.92
ZNF439Q8NDP4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.82■□□□□ 0.92
ZNF439Q8NDP4 BX255925.1-201ENST00000566954 1854 ntBASIC20.82■□□□□ 0.92
ZNF439Q8NDP4 AC021231.2-201ENST00000594613 730 ntBASIC20.82■□□□□ 0.92
ZNF439Q8NDP4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.82■□□□□ 0.92
ZNF439Q8NDP4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF439Q8NDP4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
ZNF439Q8NDP4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF439Q8NDP4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ZNF439Q8NDP4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF439Q8NDP4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF439Q8NDP4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF439Q8NDP4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ZNF439Q8NDP4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF439Q8NDP4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF439Q8NDP4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF439Q8NDP4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.79■□□□□ 0.92
ZNF439Q8NDP4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF439Q8NDP4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF439Q8NDP4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF439Q8NDP4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF439Q8NDP4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF439Q8NDP4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF439Q8NDP4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF439Q8NDP4 LINC01003-201ENST00000564834 1764 ntBASIC20.78■□□□□ 0.92
ZNF439Q8NDP4 DUX4L29-201ENST00000425409 679 ntBASIC20.78■□□□□ 0.92
ZNF439Q8NDP4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF439Q8NDP4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF439Q8NDP4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF439Q8NDP4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ZNF439Q8NDP4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF439Q8NDP4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF439Q8NDP4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZNF439Q8NDP4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ZNF439Q8NDP4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF439Q8NDP4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
ZNF439Q8NDP4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.76■□□□□ 0.91
ZNF439Q8NDP4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.76■□□□□ 0.91
ZNF439Q8NDP4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF439Q8NDP4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF439Q8NDP4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF439Q8NDP4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF439Q8NDP4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF439Q8NDP4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF439Q8NDP4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF439Q8NDP4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF439Q8NDP4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ZNF439Q8NDP4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF439Q8NDP4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF439Q8NDP4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF439Q8NDP4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.73■□□□□ 0.91
ZNF439Q8NDP4 AC018358.1-201ENST00000631079 1402 ntBASIC20.72■□□□□ 0.91
ZNF439Q8NDP4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF439Q8NDP4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF439Q8NDP4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF439Q8NDP4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF439Q8NDP4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.71■□□□□ 0.91
ZNF439Q8NDP4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
ZNF439Q8NDP4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF439Q8NDP4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.7■□□□□ 0.9
ZNF439Q8NDP4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNF439Q8NDP4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF439Q8NDP4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF439Q8NDP4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF439Q8NDP4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF439Q8NDP4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF439Q8NDP4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF439Q8NDP4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms