Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPL55Q7Z7F7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MRPL55Q7Z7F7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
MRPL55Q7Z7F7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPL55Q7Z7F7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPL55Q7Z7F7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL55Q7Z7F7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL55Q7Z7F7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL55Q7Z7F7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL55Q7Z7F7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
MRPL55Q7Z7F7 DUX4L28-201ENST00000623687 678 ntBASIC16.15■□□□□ 0.18
MRPL55Q7Z7F7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL55Q7Z7F7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL55Q7Z7F7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL55Q7Z7F7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL55Q7Z7F7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL55Q7Z7F7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC16.14■□□□□ 0.17
MRPL55Q7Z7F7 AP006261.1-201ENST00000584783 668 ntBASIC16.14■□□□□ 0.17
MRPL55Q7Z7F7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC16.14■□□□□ 0.17
MRPL55Q7Z7F7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC16.14■□□□□ 0.17
MRPL55Q7Z7F7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
MRPL55Q7Z7F7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC16.13■□□□□ 0.17
MRPL55Q7Z7F7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MRPL55Q7Z7F7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MRPL55Q7Z7F7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MRPL55Q7Z7F7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MRPL55Q7Z7F7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC16.13■□□□□ 0.17
MRPL55Q7Z7F7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MRPL55Q7Z7F7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
MRPL55Q7Z7F7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MRPL55Q7Z7F7 LINC01003-201ENST00000564834 1764 ntBASIC16.12■□□□□ 0.17
MRPL55Q7Z7F7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MRPL55Q7Z7F7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MRPL55Q7Z7F7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
MRPL55Q7Z7F7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
MRPL55Q7Z7F7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRPL55Q7Z7F7 MIR6090-201ENST00000622481 60 ntBASIC16.11■□□□□ 0.17
MRPL55Q7Z7F7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRPL55Q7Z7F7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRPL55Q7Z7F7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRPL55Q7Z7F7 AP002414.2-202ENST00000590929 1450 ntBASIC16.1■□□□□ 0.17
MRPL55Q7Z7F7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRPL55Q7Z7F7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRPL55Q7Z7F7 AC135983.2-203ENST00000454486 1613 ntBASIC16.1■□□□□ 0.17
MRPL55Q7Z7F7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC16.1■□□□□ 0.17
MRPL55Q7Z7F7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
MRPL55Q7Z7F7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRPL55Q7Z7F7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC16.1■□□□□ 0.17
MRPL55Q7Z7F7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
MRPL55Q7Z7F7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
MRPL55Q7Z7F7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRPL55Q7Z7F7 AL121749.1-202ENST00000609313 2153 ntBASIC16.09■□□□□ 0.17
MRPL55Q7Z7F7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRPL55Q7Z7F7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC16.09■□□□□ 0.17
MRPL55Q7Z7F7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC16.09■□□□□ 0.17
MRPL55Q7Z7F7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
MRPL55Q7Z7F7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRPL55Q7Z7F7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MRPL55Q7Z7F7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC16.08■□□□□ 0.17
MRPL55Q7Z7F7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC16.08■□□□□ 0.17
MRPL55Q7Z7F7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC16.08■□□□□ 0.16
MRPL55Q7Z7F7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 LINC00273-201ENST00000539813 1452 ntBASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MRPL55Q7Z7F7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC16.06■□□□□ 0.16
MRPL55Q7Z7F7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL55Q7Z7F7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC16.06■□□□□ 0.16
MRPL55Q7Z7F7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL55Q7Z7F7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL55Q7Z7F7 WHAMMP2-203ENST00000563942 1603 ntBASIC16.05■□□□□ 0.16
MRPL55Q7Z7F7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPL55Q7Z7F7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MRPL55Q7Z7F7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MRPL55Q7Z7F7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL55Q7Z7F7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL55Q7Z7F7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL55Q7Z7F7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC16.03■□□□□ 0.16
MRPL55Q7Z7F7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL55Q7Z7F7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL55Q7Z7F7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRPL55Q7Z7F7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRPL55Q7Z7F7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRPL55Q7Z7F7 AC044849.2-201ENST00000606596 710 ntBASIC16.02■□□□□ 0.16
MRPL55Q7Z7F7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRPL55Q7Z7F7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC16.02■□□□□ 0.15
MRPL55Q7Z7F7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC16.02■□□□□ 0.15
MRPL55Q7Z7F7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms