Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC32.79■■■□□ 2.84
RC3H1Q5TC82 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC32.79■■■□□ 2.84
RC3H1Q5TC82 AL135925.1-201ENST00000605920 1701 ntBASIC32.78■■■□□ 2.84
RC3H1Q5TC82 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC32.78■■■□□ 2.84
RC3H1Q5TC82 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC32.78■■■□□ 2.84
RC3H1Q5TC82 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC32.78■■■□□ 2.84
RC3H1Q5TC82 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC32.78■■■□□ 2.84
RC3H1Q5TC82 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC32.78■■■□□ 2.84
RC3H1Q5TC82 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
RC3H1Q5TC82 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
RC3H1Q5TC82 ATP5G2P3-201ENST00000429083 425 ntBASIC32.77■■■□□ 2.84
RC3H1Q5TC82 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
RC3H1Q5TC82 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC32.76■■■□□ 2.84
RC3H1Q5TC82 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
RC3H1Q5TC82 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC32.76■■■□□ 2.83
RC3H1Q5TC82 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
RC3H1Q5TC82 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC32.75■■■□□ 2.83
RC3H1Q5TC82 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC32.75■■■□□ 2.83
RC3H1Q5TC82 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC32.74■■■□□ 2.83
RC3H1Q5TC82 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
RC3H1Q5TC82 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
RC3H1Q5TC82 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC32.73■■■□□ 2.83
RC3H1Q5TC82 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
RC3H1Q5TC82 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC32.72■■■□□ 2.83
RC3H1Q5TC82 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
RC3H1Q5TC82 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
RC3H1Q5TC82 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
RC3H1Q5TC82 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.83
RC3H1Q5TC82 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.83
RC3H1Q5TC82 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
RC3H1Q5TC82 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
RC3H1Q5TC82 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
RC3H1Q5TC82 MEST-211ENST00000437945 1455 ntTSL 5 BASIC32.68■■■□□ 2.82
RC3H1Q5TC82 GUK1-208ENST00000366728 842 ntTSL 2 BASIC32.68■■■□□ 2.82
RC3H1Q5TC82 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC32.67■■■□□ 2.82
RC3H1Q5TC82 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
RC3H1Q5TC82 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
RC3H1Q5TC82 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC32.67■■■□□ 2.82
RC3H1Q5TC82 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC32.65■■■□□ 2.82
RC3H1Q5TC82 MED25-210ENST00000612854 801 ntTSL 5 BASIC32.65■■■□□ 2.82
RC3H1Q5TC82 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
RC3H1Q5TC82 MED25-214ENST00000622402 642 ntTSL 5 BASIC32.65■■■□□ 2.82
RC3H1Q5TC82 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC32.64■■■□□ 2.82
RC3H1Q5TC82 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
RC3H1Q5TC82 AC126177.7-201ENST00000547904 679 ntBASIC32.64■■■□□ 2.82
RC3H1Q5TC82 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC32.64■■■□□ 2.82
RC3H1Q5TC82 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
RC3H1Q5TC82 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC32.63■■■□□ 2.81
RC3H1Q5TC82 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC32.63■■■□□ 2.81
RC3H1Q5TC82 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
RC3H1Q5TC82 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
RC3H1Q5TC82 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
RC3H1Q5TC82 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC32.62■■■□□ 2.81
RC3H1Q5TC82 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
RC3H1Q5TC82 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC32.61■■■□□ 2.81
RC3H1Q5TC82 RARRES2P1-201ENST00000474487 481 ntBASIC32.61■■■□□ 2.81
RC3H1Q5TC82 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
RC3H1Q5TC82 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
RC3H1Q5TC82 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
RC3H1Q5TC82 MOB2-207ENST00000614710 705 ntTSL 5 BASIC32.6■■■□□ 2.81
RC3H1Q5TC82 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC32.6■■■□□ 2.81
RC3H1Q5TC82 AL157400.5-201ENST00000507624 621 ntBASIC32.59■■■□□ 2.81
RC3H1Q5TC82 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
RC3H1Q5TC82 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC32.58■■■□□ 2.81
RC3H1Q5TC82 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC32.58■■■□□ 2.81
RC3H1Q5TC82 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
RC3H1Q5TC82 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.8
RC3H1Q5TC82 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC32.57■■■□□ 2.8
RC3H1Q5TC82 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
RC3H1Q5TC82 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC32.56■■■□□ 2.8
RC3H1Q5TC82 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
RC3H1Q5TC82 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC32.55■■■□□ 2.8
RC3H1Q5TC82 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
RC3H1Q5TC82 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
RC3H1Q5TC82 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
RC3H1Q5TC82 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC32.54■■■□□ 2.8
RC3H1Q5TC82 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
RC3H1Q5TC82 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
RC3H1Q5TC82 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
RC3H1Q5TC82 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC32.52■■■□□ 2.8
RC3H1Q5TC82 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC32.52■■■□□ 2.8
RC3H1Q5TC82 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
RC3H1Q5TC82 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
RC3H1Q5TC82 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
RC3H1Q5TC82 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
RC3H1Q5TC82 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC32.5■■■□□ 2.79
RC3H1Q5TC82 AC007029.1-201ENST00000604183 313 ntBASIC32.5■■■□□ 2.79
RC3H1Q5TC82 AC129492.7-201ENST00000622992 756 ntBASIC32.5■■■□□ 2.79
RC3H1Q5TC82 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
RC3H1Q5TC82 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC32.49■■■□□ 2.79
RC3H1Q5TC82 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
RC3H1Q5TC82 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
RC3H1Q5TC82 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC32.47■■■□□ 2.79
RC3H1Q5TC82 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC32.47■■■□□ 2.79
RC3H1Q5TC82 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
RC3H1Q5TC82 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
RC3H1Q5TC82 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
RC3H1Q5TC82 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
RC3H1Q5TC82 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
RC3H1Q5TC82 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms