Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.52■■■□□ 2.32
CCDC144BQ3MJ40 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.31
CCDC144BQ3MJ40 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CCDC144BQ3MJ40 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CCDC144BQ3MJ40 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.5■■■□□ 2.31
CCDC144BQ3MJ40 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CCDC144BQ3MJ40 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CCDC144BQ3MJ40 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CCDC144BQ3MJ40 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CCDC144BQ3MJ40 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CCDC144BQ3MJ40 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
CCDC144BQ3MJ40 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
CCDC144BQ3MJ40 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CCDC144BQ3MJ40 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CCDC144BQ3MJ40 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CCDC144BQ3MJ40 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CCDC144BQ3MJ40 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.46■■■□□ 2.31
CCDC144BQ3MJ40 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CCDC144BQ3MJ40 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.45■■■□□ 2.31
CCDC144BQ3MJ40 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.44■■■□□ 2.3
CCDC144BQ3MJ40 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CCDC144BQ3MJ40 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CCDC144BQ3MJ40 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.43■■■□□ 2.3
CCDC144BQ3MJ40 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC29.42■■■□□ 2.3
CCDC144BQ3MJ40 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC144BQ3MJ40 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC144BQ3MJ40 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC144BQ3MJ40 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC144BQ3MJ40 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC144BQ3MJ40 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC144BQ3MJ40 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC144BQ3MJ40 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC29.41■■■□□ 2.3
CCDC144BQ3MJ40 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
CCDC144BQ3MJ40 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CCDC144BQ3MJ40 RARRES2P2-201ENST00000394842 485 ntBASIC29.39■■■□□ 2.3
CCDC144BQ3MJ40 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CCDC144BQ3MJ40 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CCDC144BQ3MJ40 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CCDC144BQ3MJ40 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
CCDC144BQ3MJ40 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC29.39■■■□□ 2.3
CCDC144BQ3MJ40 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
CCDC144BQ3MJ40 GPX1-201ENST00000419349 1106 ntBASIC29.38■■■□□ 2.29
CCDC144BQ3MJ40 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC29.38■■■□□ 2.29
CCDC144BQ3MJ40 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.37■■■□□ 2.29
CCDC144BQ3MJ40 AC142086.6-201ENST00000621154 1765 ntBASIC29.36■■■□□ 2.29
CCDC144BQ3MJ40 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
CCDC144BQ3MJ40 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CCDC144BQ3MJ40 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
CCDC144BQ3MJ40 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CCDC144BQ3MJ40 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CCDC144BQ3MJ40 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
CCDC144BQ3MJ40 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CCDC144BQ3MJ40 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CCDC144BQ3MJ40 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
CCDC144BQ3MJ40 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CCDC144BQ3MJ40 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC29.33■■■□□ 2.29
CCDC144BQ3MJ40 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CCDC144BQ3MJ40 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
CCDC144BQ3MJ40 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
CCDC144BQ3MJ40 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
CCDC144BQ3MJ40 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC29.32■■■□□ 2.28
CCDC144BQ3MJ40 AL135925.1-201ENST00000605920 1701 ntBASIC29.31■■■□□ 2.28
CCDC144BQ3MJ40 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC29.31■■■□□ 2.28
CCDC144BQ3MJ40 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
CCDC144BQ3MJ40 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CCDC144BQ3MJ40 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CCDC144BQ3MJ40 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.31■■■□□ 2.28
CCDC144BQ3MJ40 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC29.3■■■□□ 2.28
CCDC144BQ3MJ40 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC29.3■■■□□ 2.28
CCDC144BQ3MJ40 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.29■■■□□ 2.28
CCDC144BQ3MJ40 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CCDC144BQ3MJ40 AC127502.1-201ENST00000399971 1502 ntBASIC29.29■■■□□ 2.28
CCDC144BQ3MJ40 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCDC144BQ3MJ40 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCDC144BQ3MJ40 RNF126P1-201ENST00000567452 1320 ntBASIC29.27■■■□□ 2.28
CCDC144BQ3MJ40 CEP120-209ENST00000515110 606 ntTSL 3 BASIC29.27■■■□□ 2.28
CCDC144BQ3MJ40 ABHD17AP5-201ENST00000580133 923 ntBASIC29.27■■■□□ 2.28
CCDC144BQ3MJ40 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
CCDC144BQ3MJ40 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC29.26■■■□□ 2.27
CCDC144BQ3MJ40 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.27
CCDC144BQ3MJ40 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
CCDC144BQ3MJ40 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CCDC144BQ3MJ40 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
CCDC144BQ3MJ40 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CCDC144BQ3MJ40 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CCDC144BQ3MJ40 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CCDC144BQ3MJ40 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CCDC144BQ3MJ40 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CCDC144BQ3MJ40 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC29.22■■■□□ 2.27
CCDC144BQ3MJ40 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CCDC144BQ3MJ40 AC135983.2-203ENST00000454486 1613 ntBASIC29.22■■■□□ 2.27
CCDC144BQ3MJ40 WHAMMP2-203ENST00000563942 1603 ntBASIC29.22■■■□□ 2.27
CCDC144BQ3MJ40 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC29.21■■■□□ 2.27
CCDC144BQ3MJ40 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC29.21■■■□□ 2.27
CCDC144BQ3MJ40 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.27
CCDC144BQ3MJ40 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CCDC144BQ3MJ40 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC29.2■■■□□ 2.26
CCDC144BQ3MJ40 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.2■■■□□ 2.26
CCDC144BQ3MJ40 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.26
CCDC144BQ3MJ40 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms