Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MECP2P51608 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MECP2P51608 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MECP2P51608 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.55■■□□□ 1.04
MECP2P51608 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
MECP2P51608 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MECP2P51608 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
MECP2P51608 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
MECP2P51608 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.53■■□□□ 1.04
MECP2P51608 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.53■■□□□ 1.04
MECP2P51608 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.53■■□□□ 1.04
MECP2P51608 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
MECP2P51608 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.53■■□□□ 1.04
MECP2P51608 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
MECP2P51608 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MECP2P51608 AC010864.1-201ENST00000609407 1511 ntBASIC21.51■■□□□ 1.03
MECP2P51608 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
MECP2P51608 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MECP2P51608 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
MECP2P51608 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MECP2P51608 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MECP2P51608 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MECP2P51608 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.5■■□□□ 1.03
MECP2P51608 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MECP2P51608 AC145676.1-201ENST00000514988 2004 ntBASIC21.5■■□□□ 1.03
MECP2P51608 AC093323.1-202ENST00000635031 2045 ntBASIC21.5■■□□□ 1.03
MECP2P51608 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MECP2P51608 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.49■■□□□ 1.03
MECP2P51608 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
MECP2P51608 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
MECP2P51608 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MECP2P51608 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.49■■□□□ 1.03
MECP2P51608 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MECP2P51608 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MECP2P51608 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
MECP2P51608 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
MECP2P51608 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MECP2P51608 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MECP2P51608 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
MECP2P51608 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MECP2P51608 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MECP2P51608 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
MECP2P51608 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.47■■□□□ 1.03
MECP2P51608 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.46■■□□□ 1.03
MECP2P51608 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.46■■□□□ 1.03
MECP2P51608 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
MECP2P51608 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MECP2P51608 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
MECP2P51608 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
MECP2P51608 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.02
MECP2P51608 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MECP2P51608 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MECP2P51608 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
MECP2P51608 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.45■■□□□ 1.02
MECP2P51608 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.45■■□□□ 1.02
MECP2P51608 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MECP2P51608 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MECP2P51608 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.44■■□□□ 1.02
MECP2P51608 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MECP2P51608 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
MECP2P51608 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MECP2P51608 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MECP2P51608 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.43■■□□□ 1.02
MECP2P51608 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.43■■□□□ 1.02
MECP2P51608 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.43■■□□□ 1.02
MECP2P51608 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
MECP2P51608 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.42■■□□□ 1.02
MECP2P51608 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MECP2P51608 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
MECP2P51608 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MECP2P51608 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MECP2P51608 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
MECP2P51608 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MECP2P51608 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MECP2P51608 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
MECP2P51608 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MECP2P51608 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.39■■□□□ 1.01
MECP2P51608 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MECP2P51608 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.39■■□□□ 1.01
MECP2P51608 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
MECP2P51608 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MECP2P51608 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MECP2P51608 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
MECP2P51608 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
MECP2P51608 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MECP2P51608 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
MECP2P51608 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
MECP2P51608 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MECP2P51608 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MECP2P51608 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.37■■□□□ 1.01
MECP2P51608 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
MECP2P51608 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MECP2P51608 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.36■■□□□ 1.01
MECP2P51608 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
MECP2P51608 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.35■■□□□ 1.01
MECP2P51608 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.35■■□□□ 1.01
MECP2P51608 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MECP2P51608 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MECP2P51608 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.35■■□□□ 1.01
MECP2P51608 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms