Protein–RNA interactions for Protein: O43508

TNFSF12, Tumor necrosis factor ligand superfamily member 12, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12O43508 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF12O43508 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF12O43508 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF12O43508 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNFSF12O43508 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.97■□□□□ 0.95
TNFSF12O43508 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.96■□□□□ 0.95
TNFSF12O43508 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFSF12O43508 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
TNFSF12O43508 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFSF12O43508 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.95■□□□□ 0.94
TNFSF12O43508 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFSF12O43508 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TNFSF12O43508 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFSF12O43508 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.95■□□□□ 0.94
TNFSF12O43508 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFSF12O43508 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.95■□□□□ 0.94
TNFSF12O43508 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFSF12O43508 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFSF12O43508 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFSF12O43508 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFSF12O43508 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.94■□□□□ 0.94
TNFSF12O43508 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFSF12O43508 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFSF12O43508 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFSF12O43508 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.94■□□□□ 0.94
TNFSF12O43508 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFSF12O43508 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TNFSF12O43508 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TNFSF12O43508 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TNFSF12O43508 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.93■□□□□ 0.94
TNFSF12O43508 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TNFSF12O43508 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFSF12O43508 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFSF12O43508 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF12O43508 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.92■□□□□ 0.94
TNFSF12O43508 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF12O43508 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF12O43508 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF12O43508 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TNFSF12O43508 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TNFSF12O43508 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF12O43508 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TNFSF12O43508 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.91■□□□□ 0.94
TNFSF12O43508 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF12O43508 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.9■□□□□ 0.94
TNFSF12O43508 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF12O43508 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF12O43508 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.89■□□□□ 0.93
TNFSF12O43508 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.89■□□□□ 0.93
TNFSF12O43508 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFSF12O43508 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TNFSF12O43508 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.88■□□□□ 0.93
TNFSF12O43508 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TNFSF12O43508 MIR762-201ENST00000390236 83 ntBASIC20.88■□□□□ 0.93
TNFSF12O43508 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFSF12O43508 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.88■□□□□ 0.93
TNFSF12O43508 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFSF12O43508 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TNFSF12O43508 AC135731.1-201ENST00000569415 2548 ntBASIC20.87■□□□□ 0.93
TNFSF12O43508 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF12O43508 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF12O43508 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.86■□□□□ 0.93
TNFSF12O43508 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TNFSF12O43508 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF12O43508 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.86■□□□□ 0.93
TNFSF12O43508 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF12O43508 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.85■□□□□ 0.93
TNFSF12O43508 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF12O43508 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.85■□□□□ 0.93
TNFSF12O43508 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF12O43508 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF12O43508 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.85■□□□□ 0.93
TNFSF12O43508 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF12O43508 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF12O43508 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
TNFSF12O43508 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF12O43508 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.84■□□□□ 0.93
TNFSF12O43508 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
TNFSF12O43508 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.83■□□□□ 0.93
TNFSF12O43508 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TNFSF12O43508 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TNFSF12O43508 AP002414.2-202ENST00000590929 1450 ntBASIC20.83■□□□□ 0.93
TNFSF12O43508 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.83■□□□□ 0.93
TNFSF12O43508 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
TNFSF12O43508 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.83■□□□□ 0.92
TNFSF12O43508 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
TNFSF12O43508 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.83■□□□□ 0.92
TNFSF12O43508 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TNFSF12O43508 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF12O43508 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF12O43508 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF12O43508 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF12O43508 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF12O43508 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.81■□□□□ 0.92
TNFSF12O43508 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF12O43508 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.81■□□□□ 0.92
TNFSF12O43508 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TNFSF12O43508 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.81■□□□□ 0.92
TNFSF12O43508 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF12O43508 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms