Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.01■■□□□ 1.43
PDLIM1O00151 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PDLIM1O00151 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PDLIM1O00151 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PDLIM1O00151 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PDLIM1O00151 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24■■□□□ 1.43
PDLIM1O00151 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
PDLIM1O00151 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24■■□□□ 1.43
PDLIM1O00151 AC010864.1-201ENST00000609407 1511 ntBASIC24■■□□□ 1.43
PDLIM1O00151 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PDLIM1O00151 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.98■■□□□ 1.43
PDLIM1O00151 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.98■■□□□ 1.43
PDLIM1O00151 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.98■■□□□ 1.43
PDLIM1O00151 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.98■■□□□ 1.43
PDLIM1O00151 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.98■■□□□ 1.43
PDLIM1O00151 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PDLIM1O00151 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PDLIM1O00151 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PDLIM1O00151 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PDLIM1O00151 WASH5P-204ENST00000632292 975 ntBASIC23.97■■□□□ 1.43
PDLIM1O00151 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
PDLIM1O00151 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
PDLIM1O00151 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PDLIM1O00151 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PDLIM1O00151 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.95■■□□□ 1.42
PDLIM1O00151 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.95■■□□□ 1.42
PDLIM1O00151 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PDLIM1O00151 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PDLIM1O00151 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.93■■□□□ 1.42
PDLIM1O00151 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
PDLIM1O00151 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDLIM1O00151 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
PDLIM1O00151 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDLIM1O00151 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDLIM1O00151 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
PDLIM1O00151 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.92■■□□□ 1.42
PDLIM1O00151 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.92■■□□□ 1.42
PDLIM1O00151 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDLIM1O00151 EBPL-202ENST00000378268 680 ntTSL 3 BASIC23.91■■□□□ 1.42
PDLIM1O00151 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.91■■□□□ 1.42
PDLIM1O00151 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.91■■□□□ 1.42
PDLIM1O00151 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PDLIM1O00151 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PDLIM1O00151 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.9■■□□□ 1.42
PDLIM1O00151 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDLIM1O00151 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.9■■□□□ 1.42
PDLIM1O00151 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDLIM1O00151 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDLIM1O00151 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.9■■□□□ 1.42
PDLIM1O00151 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.9■■□□□ 1.42
PDLIM1O00151 LINC01003-201ENST00000564834 1764 ntBASIC23.9■■□□□ 1.42
PDLIM1O00151 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PDLIM1O00151 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PDLIM1O00151 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PDLIM1O00151 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PDLIM1O00151 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PDLIM1O00151 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDLIM1O00151 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PDLIM1O00151 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDLIM1O00151 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PDLIM1O00151 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.87■■□□□ 1.41
PDLIM1O00151 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDLIM1O00151 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PDLIM1O00151 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDLIM1O00151 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDLIM1O00151 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.86■■□□□ 1.41
PDLIM1O00151 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.86■■□□□ 1.41
PDLIM1O00151 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDLIM1O00151 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.86■■□□□ 1.41
PDLIM1O00151 AC093323.1-202ENST00000635031 2045 ntBASIC23.86■■□□□ 1.41
PDLIM1O00151 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDLIM1O00151 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDLIM1O00151 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDLIM1O00151 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDLIM1O00151 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDLIM1O00151 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDLIM1O00151 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDLIM1O00151 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.84■■□□□ 1.41
PDLIM1O00151 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDLIM1O00151 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDLIM1O00151 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDLIM1O00151 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.83■■□□□ 1.41
PDLIM1O00151 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PDLIM1O00151 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDLIM1O00151 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDLIM1O00151 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDLIM1O00151 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDLIM1O00151 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PDLIM1O00151 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDLIM1O00151 AP004833.2-201ENST00000532228 1454 ntBASIC23.78■■□□□ 1.4
PDLIM1O00151 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
PDLIM1O00151 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDLIM1O00151 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.78■■□□□ 1.4
PDLIM1O00151 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PDLIM1O00151 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
PDLIM1O00151 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDLIM1O00151 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDLIM1O00151 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.77■■□□□ 1.4
PDLIM1O00151 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDLIM1O00151 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms