Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TRBV7-9A0A0J9YWB2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV7-9A0A0J9YWB2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV7-9A0A0J9YWB2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.84■□□□□ 0.61
TRBV7-9A0A0J9YWB2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.84■□□□□ 0.61
TRBV7-9A0A0J9YWB2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.84■□□□□ 0.61
TRBV7-9A0A0J9YWB2 AC135983.2-203ENST00000454486 1613 ntBASIC18.83■□□□□ 0.61
TRBV7-9A0A0J9YWB2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV7-9A0A0J9YWB2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV7-9A0A0J9YWB2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV7-9A0A0J9YWB2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV7-9A0A0J9YWB2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV7-9A0A0J9YWB2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV7-9A0A0J9YWB2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.82■□□□□ 0.6
TRBV7-9A0A0J9YWB2 AC018358.1-201ENST00000631079 1402 ntBASIC18.82■□□□□ 0.6
TRBV7-9A0A0J9YWB2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV7-9A0A0J9YWB2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.81■□□□□ 0.6
TRBV7-9A0A0J9YWB2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV7-9A0A0J9YWB2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV7-9A0A0J9YWB2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV7-9A0A0J9YWB2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV7-9A0A0J9YWB2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV7-9A0A0J9YWB2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV7-9A0A0J9YWB2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.8■□□□□ 0.6
TRBV7-9A0A0J9YWB2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.8■□□□□ 0.6
TRBV7-9A0A0J9YWB2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV7-9A0A0J9YWB2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRBV7-9A0A0J9YWB2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.8■□□□□ 0.6
TRBV7-9A0A0J9YWB2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV7-9A0A0J9YWB2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.8■□□□□ 0.6
TRBV7-9A0A0J9YWB2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV7-9A0A0J9YWB2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV7-9A0A0J9YWB2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV7-9A0A0J9YWB2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRBV7-9A0A0J9YWB2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV7-9A0A0J9YWB2 AC135731.1-201ENST00000569415 2548 ntBASIC18.78■□□□□ 0.6
TRBV7-9A0A0J9YWB2 LINC00273-201ENST00000539813 1452 ntBASIC18.78■□□□□ 0.6
TRBV7-9A0A0J9YWB2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TRBV7-9A0A0J9YWB2 SUZ12P1-203ENST00000578195 985 ntBASIC18.78■□□□□ 0.6
TRBV7-9A0A0J9YWB2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.78■□□□□ 0.6
TRBV7-9A0A0J9YWB2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRBV7-9A0A0J9YWB2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.78■□□□□ 0.6
TRBV7-9A0A0J9YWB2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRBV7-9A0A0J9YWB2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV7-9A0A0J9YWB2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV7-9A0A0J9YWB2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV7-9A0A0J9YWB2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.77■□□□□ 0.59
TRBV7-9A0A0J9YWB2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV7-9A0A0J9YWB2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
TRBV7-9A0A0J9YWB2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV7-9A0A0J9YWB2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV7-9A0A0J9YWB2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV7-9A0A0J9YWB2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV7-9A0A0J9YWB2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV7-9A0A0J9YWB2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.75■□□□□ 0.59
TRBV7-9A0A0J9YWB2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV7-9A0A0J9YWB2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV7-9A0A0J9YWB2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TRBV7-9A0A0J9YWB2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.74■□□□□ 0.59
TRBV7-9A0A0J9YWB2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV7-9A0A0J9YWB2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TRBV7-9A0A0J9YWB2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV7-9A0A0J9YWB2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV7-9A0A0J9YWB2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TRBV7-9A0A0J9YWB2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.74■□□□□ 0.59
TRBV7-9A0A0J9YWB2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRBV7-9A0A0J9YWB2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV7-9A0A0J9YWB2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV7-9A0A0J9YWB2 MIR3665-201ENST00000578708 105 ntBASIC18.73■□□□□ 0.59
TRBV7-9A0A0J9YWB2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV7-9A0A0J9YWB2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV7-9A0A0J9YWB2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV7-9A0A0J9YWB2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.72■□□□□ 0.59
TRBV7-9A0A0J9YWB2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.72■□□□□ 0.59
TRBV7-9A0A0J9YWB2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV7-9A0A0J9YWB2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV7-9A0A0J9YWB2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV7-9A0A0J9YWB2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TRBV7-9A0A0J9YWB2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
TRBV7-9A0A0J9YWB2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV7-9A0A0J9YWB2 WHAMMP2-203ENST00000563942 1603 ntBASIC18.71■□□□□ 0.59
TRBV7-9A0A0J9YWB2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV7-9A0A0J9YWB2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV7-9A0A0J9YWB2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV7-9A0A0J9YWB2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV7-9A0A0J9YWB2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.71■□□□□ 0.59
TRBV7-9A0A0J9YWB2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.71■□□□□ 0.59
TRBV7-9A0A0J9YWB2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TRBV7-9A0A0J9YWB2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV7-9A0A0J9YWB2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV7-9A0A0J9YWB2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV7-9A0A0J9YWB2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV7-9A0A0J9YWB2 AP006261.1-201ENST00000584783 668 ntBASIC18.7■□□□□ 0.58
TRBV7-9A0A0J9YWB2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.7■□□□□ 0.58
TRBV7-9A0A0J9YWB2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV7-9A0A0J9YWB2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV7-9A0A0J9YWB2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV7-9A0A0J9YWB2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV7-9A0A0J9YWB2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV7-9A0A0J9YWB2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms