Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.65■■□□□ 1.7
CCDC163A0A0D9SF12 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.64■■□□□ 1.7
CCDC163A0A0D9SF12 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC163A0A0D9SF12 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.64■■□□□ 1.7
CCDC163A0A0D9SF12 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
CCDC163A0A0D9SF12 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC163A0A0D9SF12 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.63■■□□□ 1.69
CCDC163A0A0D9SF12 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC163A0A0D9SF12 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC163A0A0D9SF12 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC163A0A0D9SF12 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.62■■□□□ 1.69
CCDC163A0A0D9SF12 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC163A0A0D9SF12 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.62■■□□□ 1.69
CCDC163A0A0D9SF12 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC163A0A0D9SF12 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
CCDC163A0A0D9SF12 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC163A0A0D9SF12 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC163A0A0D9SF12 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCDC163A0A0D9SF12 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCDC163A0A0D9SF12 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC163A0A0D9SF12 RARRES2P1-201ENST00000474487 481 ntBASIC25.59■■□□□ 1.69
CCDC163A0A0D9SF12 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC163A0A0D9SF12 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC163A0A0D9SF12 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC25.57■■□□□ 1.68
CCDC163A0A0D9SF12 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC163A0A0D9SF12 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC163A0A0D9SF12 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
CCDC163A0A0D9SF12 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.55■■□□□ 1.68
CCDC163A0A0D9SF12 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC163A0A0D9SF12 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC163A0A0D9SF12 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.55■■□□□ 1.68
CCDC163A0A0D9SF12 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC163A0A0D9SF12 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.55■■□□□ 1.68
CCDC163A0A0D9SF12 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.55■■□□□ 1.68
CCDC163A0A0D9SF12 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC163A0A0D9SF12 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC163A0A0D9SF12 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC163A0A0D9SF12 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.54■■□□□ 1.68
CCDC163A0A0D9SF12 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC163A0A0D9SF12 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC163A0A0D9SF12 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCDC163A0A0D9SF12 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.53■■□□□ 1.68
CCDC163A0A0D9SF12 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
CCDC163A0A0D9SF12 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.51■■□□□ 1.68
CCDC163A0A0D9SF12 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC163A0A0D9SF12 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC163A0A0D9SF12 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.51■■□□□ 1.67
CCDC163A0A0D9SF12 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC163A0A0D9SF12 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC163A0A0D9SF12 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC163A0A0D9SF12 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
CCDC163A0A0D9SF12 AL135925.1-201ENST00000605920 1701 ntBASIC25.49■■□□□ 1.67
CCDC163A0A0D9SF12 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC163A0A0D9SF12 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC163A0A0D9SF12 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC163A0A0D9SF12 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.48■■□□□ 1.67
CCDC163A0A0D9SF12 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.48■■□□□ 1.67
CCDC163A0A0D9SF12 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.48■■□□□ 1.67
CCDC163A0A0D9SF12 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC163A0A0D9SF12 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.48■■□□□ 1.67
CCDC163A0A0D9SF12 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.47■■□□□ 1.67
CCDC163A0A0D9SF12 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC163A0A0D9SF12 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.47■■□□□ 1.67
CCDC163A0A0D9SF12 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.47■■□□□ 1.67
CCDC163A0A0D9SF12 AL157400.5-201ENST00000507624 621 ntBASIC25.47■■□□□ 1.67
CCDC163A0A0D9SF12 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.47■■□□□ 1.67
CCDC163A0A0D9SF12 AC007029.1-201ENST00000604183 313 ntBASIC25.47■■□□□ 1.67
CCDC163A0A0D9SF12 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC163A0A0D9SF12 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC163A0A0D9SF12 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.46■■□□□ 1.67
CCDC163A0A0D9SF12 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.46■■□□□ 1.67
CCDC163A0A0D9SF12 AC129492.7-201ENST00000622992 756 ntBASIC25.46■■□□□ 1.67
CCDC163A0A0D9SF12 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC163A0A0D9SF12 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC163A0A0D9SF12 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.45■■□□□ 1.66
CCDC163A0A0D9SF12 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
CCDC163A0A0D9SF12 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.44■■□□□ 1.66
CCDC163A0A0D9SF12 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC163A0A0D9SF12 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC163A0A0D9SF12 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.42■■□□□ 1.66
CCDC163A0A0D9SF12 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC163A0A0D9SF12 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC163A0A0D9SF12 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.42■■□□□ 1.66
CCDC163A0A0D9SF12 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC163A0A0D9SF12 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC163A0A0D9SF12 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.41■■□□□ 1.66
CCDC163A0A0D9SF12 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC163A0A0D9SF12 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
CCDC163A0A0D9SF12 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC163A0A0D9SF12 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC163A0A0D9SF12 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.39■■□□□ 1.66
CCDC163A0A0D9SF12 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC163A0A0D9SF12 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.38■■□□□ 1.65
CCDC163A0A0D9SF12 AL592293.1-201ENST00000502889 1188 ntBASIC25.38■■□□□ 1.65
CCDC163A0A0D9SF12 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.38■■□□□ 1.65
CCDC163A0A0D9SF12 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.38■■□□□ 1.65
CCDC163A0A0D9SF12 AC133552.2-201ENST00000619106 1032 ntBASIC25.38■■□□□ 1.65
CCDC163A0A0D9SF12 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC163A0A0D9SF12 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC163A0A0D9SF12 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms