Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV8-2A0A0B4J237 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TRAV8-2A0A0B4J237 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAV8-2A0A0B4J237 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRAV8-2A0A0B4J237 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV8-2A0A0B4J237 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV8-2A0A0B4J237 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRAV8-2A0A0B4J237 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.2■□□□□ 0.66
TRAV8-2A0A0B4J237 MIR3665-201ENST00000578708 105 ntBASIC19.2■□□□□ 0.66
TRAV8-2A0A0B4J237 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV8-2A0A0B4J237 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAV8-2A0A0B4J237 AP002414.2-202ENST00000590929 1450 ntBASIC19.2■□□□□ 0.66
TRAV8-2A0A0B4J237 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TRAV8-2A0A0B4J237 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV8-2A0A0B4J237 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV8-2A0A0B4J237 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV8-2A0A0B4J237 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.2■□□□□ 0.66
TRAV8-2A0A0B4J237 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRAV8-2A0A0B4J237 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.19■□□□□ 0.66
TRAV8-2A0A0B4J237 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV8-2A0A0B4J237 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV8-2A0A0B4J237 WHAMMP2-203ENST00000563942 1603 ntBASIC19.18■□□□□ 0.66
TRAV8-2A0A0B4J237 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV8-2A0A0B4J237 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.18■□□□□ 0.66
TRAV8-2A0A0B4J237 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV8-2A0A0B4J237 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV8-2A0A0B4J237 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV8-2A0A0B4J237 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.17■□□□□ 0.66
TRAV8-2A0A0B4J237 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV8-2A0A0B4J237 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.17■□□□□ 0.66
TRAV8-2A0A0B4J237 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV8-2A0A0B4J237 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV8-2A0A0B4J237 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV8-2A0A0B4J237 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV8-2A0A0B4J237 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV8-2A0A0B4J237 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV8-2A0A0B4J237 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.15■□□□□ 0.66
TRAV8-2A0A0B4J237 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAV8-2A0A0B4J237 AP006261.1-201ENST00000584783 668 ntBASIC19.15■□□□□ 0.66
TRAV8-2A0A0B4J237 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV8-2A0A0B4J237 LINC00273-201ENST00000539813 1452 ntBASIC19.15■□□□□ 0.66
TRAV8-2A0A0B4J237 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV8-2A0A0B4J237 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRAV8-2A0A0B4J237 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV8-2A0A0B4J237 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV8-2A0A0B4J237 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV8-2A0A0B4J237 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TRAV8-2A0A0B4J237 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV8-2A0A0B4J237 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAV8-2A0A0B4J237 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAV8-2A0A0B4J237 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV8-2A0A0B4J237 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV8-2A0A0B4J237 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRAV8-2A0A0B4J237 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TRAV8-2A0A0B4J237 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV8-2A0A0B4J237 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.12■□□□□ 0.65
TRAV8-2A0A0B4J237 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV8-2A0A0B4J237 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV8-2A0A0B4J237 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV8-2A0A0B4J237 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV8-2A0A0B4J237 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV8-2A0A0B4J237 AC087741.3-201ENST00000624270 1347 ntBASIC19.1■□□□□ 0.65
TRAV8-2A0A0B4J237 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV8-2A0A0B4J237 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV8-2A0A0B4J237 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV8-2A0A0B4J237 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV8-2A0A0B4J237 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV8-2A0A0B4J237 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV8-2A0A0B4J237 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAV8-2A0A0B4J237 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV8-2A0A0B4J237 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV8-2A0A0B4J237 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.08■□□□□ 0.64
TRAV8-2A0A0B4J237 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.08■□□□□ 0.64
TRAV8-2A0A0B4J237 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV8-2A0A0B4J237 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV8-2A0A0B4J237 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV8-2A0A0B4J237 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV8-2A0A0B4J237 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV8-2A0A0B4J237 AL162393.1-201ENST00000437852 946 ntBASIC19.07■□□□□ 0.64
TRAV8-2A0A0B4J237 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV8-2A0A0B4J237 AC018358.1-201ENST00000631079 1402 ntBASIC19.07■□□□□ 0.64
TRAV8-2A0A0B4J237 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV8-2A0A0B4J237 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV8-2A0A0B4J237 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.06■□□□□ 0.64
TRAV8-2A0A0B4J237 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV8-2A0A0B4J237 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV8-2A0A0B4J237 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TRAV8-2A0A0B4J237 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TRAV8-2A0A0B4J237 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.05■□□□□ 0.64
TRAV8-2A0A0B4J237 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV8-2A0A0B4J237 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TRAV8-2A0A0B4J237 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV8-2A0A0B4J237 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV8-2A0A0B4J237 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV8-2A0A0B4J237 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAV8-2A0A0B4J237 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV8-2A0A0B4J237 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV8-2A0A0B4J237 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV8-2A0A0B4J237 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV8-2A0A0B4J237 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms