Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.19■□□□□ 0.98
TRBV23-1A0A0A0MS06 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TRBV23-1A0A0A0MS06 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRBV23-1A0A0A0MS06 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.19■□□□□ 0.98
TRBV23-1A0A0A0MS06 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV23-1A0A0A0MS06 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.18■□□□□ 0.98
TRBV23-1A0A0A0MS06 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.18■□□□□ 0.98
TRBV23-1A0A0A0MS06 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRBV23-1A0A0A0MS06 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRBV23-1A0A0A0MS06 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRBV23-1A0A0A0MS06 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
TRBV23-1A0A0A0MS06 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRBV23-1A0A0A0MS06 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.16■□□□□ 0.98
TRBV23-1A0A0A0MS06 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.16■□□□□ 0.98
TRBV23-1A0A0A0MS06 DUX4L11-201ENST00000611504 1267 ntBASIC21.16■□□□□ 0.98
TRBV23-1A0A0A0MS06 DUX4L12-201ENST00000614593 1267 ntBASIC21.16■□□□□ 0.98
TRBV23-1A0A0A0MS06 DUX4L14-201ENST00000621227 1267 ntBASIC21.16■□□□□ 0.98
TRBV23-1A0A0A0MS06 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.15■□□□□ 0.98
TRBV23-1A0A0A0MS06 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.15■□□□□ 0.98
TRBV23-1A0A0A0MS06 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.15■□□□□ 0.98
TRBV23-1A0A0A0MS06 MIR7108-201ENST00000614319 87 ntBASIC21.15■□□□□ 0.98
TRBV23-1A0A0A0MS06 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRBV23-1A0A0A0MS06 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
TRBV23-1A0A0A0MS06 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRBV23-1A0A0A0MS06 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRBV23-1A0A0A0MS06 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRBV23-1A0A0A0MS06 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.14■□□□□ 0.97
TRBV23-1A0A0A0MS06 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.14■□□□□ 0.97
TRBV23-1A0A0A0MS06 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
TRBV23-1A0A0A0MS06 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.14■□□□□ 0.97
TRBV23-1A0A0A0MS06 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.14■□□□□ 0.97
TRBV23-1A0A0A0MS06 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRBV23-1A0A0A0MS06 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.13■□□□□ 0.97
TRBV23-1A0A0A0MS06 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRBV23-1A0A0A0MS06 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.13■□□□□ 0.97
TRBV23-1A0A0A0MS06 DUX4L13-201ENST00000554103 1267 ntBASIC21.13■□□□□ 0.97
TRBV23-1A0A0A0MS06 DUX4L15-201ENST00000611059 1267 ntBASIC21.13■□□□□ 0.97
TRBV23-1A0A0A0MS06 DUX4L23-201ENST00000615195 1269 ntBASIC21.13■□□□□ 0.97
TRBV23-1A0A0A0MS06 DUX4L24-201ENST00000617576 1269 ntBASIC21.13■□□□□ 0.97
TRBV23-1A0A0A0MS06 DUX4L22-201ENST00000618238 1269 ntBASIC21.13■□□□□ 0.97
TRBV23-1A0A0A0MS06 DUX4L20-201ENST00000619712 1269 ntBASIC21.13■□□□□ 0.97
TRBV23-1A0A0A0MS06 DUX4L21-201ENST00000622058 1269 ntBASIC21.13■□□□□ 0.97
TRBV23-1A0A0A0MS06 DUX4L10-201ENST00000622460 1267 ntBASIC21.13■□□□□ 0.97
TRBV23-1A0A0A0MS06 DUX4L25-201ENST00000624915 1269 ntBASIC21.13■□□□□ 0.97
TRBV23-1A0A0A0MS06 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRBV23-1A0A0A0MS06 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.12■□□□□ 0.97
TRBV23-1A0A0A0MS06 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRBV23-1A0A0A0MS06 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.12■□□□□ 0.97
TRBV23-1A0A0A0MS06 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TRBV23-1A0A0A0MS06 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.12■□□□□ 0.97
TRBV23-1A0A0A0MS06 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TRBV23-1A0A0A0MS06 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
TRBV23-1A0A0A0MS06 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.11■□□□□ 0.97
TRBV23-1A0A0A0MS06 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.11■□□□□ 0.97
TRBV23-1A0A0A0MS06 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV23-1A0A0A0MS06 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.1■□□□□ 0.97
TRBV23-1A0A0A0MS06 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRBV23-1A0A0A0MS06 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.1■□□□□ 0.97
TRBV23-1A0A0A0MS06 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRBV23-1A0A0A0MS06 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.09■□□□□ 0.97
TRBV23-1A0A0A0MS06 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.09■□□□□ 0.97
TRBV23-1A0A0A0MS06 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.08■□□□□ 0.97
TRBV23-1A0A0A0MS06 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRBV23-1A0A0A0MS06 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRBV23-1A0A0A0MS06 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRBV23-1A0A0A0MS06 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRBV23-1A0A0A0MS06 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
TRBV23-1A0A0A0MS06 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRBV23-1A0A0A0MS06 AC100797.4-201ENST00000631653 1827 ntBASIC21.08■□□□□ 0.96
TRBV23-1A0A0A0MS06 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRBV23-1A0A0A0MS06 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRBV23-1A0A0A0MS06 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV23-1A0A0A0MS06 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV23-1A0A0A0MS06 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV23-1A0A0A0MS06 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV23-1A0A0A0MS06 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV23-1A0A0A0MS06 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.07■□□□□ 0.96
TRBV23-1A0A0A0MS06 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV23-1A0A0A0MS06 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV23-1A0A0A0MS06 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRBV23-1A0A0A0MS06 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
TRBV23-1A0A0A0MS06 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRBV23-1A0A0A0MS06 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV23-1A0A0A0MS06 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.05■□□□□ 0.96
TRBV23-1A0A0A0MS06 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV23-1A0A0A0MS06 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV23-1A0A0A0MS06 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV23-1A0A0A0MS06 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV23-1A0A0A0MS06 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV23-1A0A0A0MS06 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV23-1A0A0A0MS06 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV23-1A0A0A0MS06 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
TRBV23-1A0A0A0MS06 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV23-1A0A0A0MS06 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
TRBV23-1A0A0A0MS06 AC110285.7-201ENST00000624417 1536 ntBASIC21.04■□□□□ 0.96
TRBV23-1A0A0A0MS06 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV23-1A0A0A0MS06 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.03■□□□□ 0.96
TRBV23-1A0A0A0MS06 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.03■□□□□ 0.96
TRBV23-1A0A0A0MS06 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV23-1A0A0A0MS06 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms