Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
DDX49Q9Y6V7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.47■■■□□ 2.47
DDX49Q9Y6V7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
DDX49Q9Y6V7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
DDX49Q9Y6V7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.47■■■□□ 2.47
DDX49Q9Y6V7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
DDX49Q9Y6V7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
DDX49Q9Y6V7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
DDX49Q9Y6V7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.46■■■□□ 2.47
DDX49Q9Y6V7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.46■■■□□ 2.47
DDX49Q9Y6V7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
DDX49Q9Y6V7 DRD5P2-201ENST00000421395 2012 ntBASIC30.46■■■□□ 2.47
DDX49Q9Y6V7 AL139393.2-201ENST00000608721 2025 ntBASIC30.46■■■□□ 2.47
DDX49Q9Y6V7 AL121749.1-202ENST00000609313 2153 ntBASIC30.45■■■□□ 2.47
DDX49Q9Y6V7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
DDX49Q9Y6V7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
DDX49Q9Y6V7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
DDX49Q9Y6V7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.44■■■□□ 2.46
DDX49Q9Y6V7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
DDX49Q9Y6V7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
DDX49Q9Y6V7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
DDX49Q9Y6V7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
DDX49Q9Y6V7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
DDX49Q9Y6V7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC30.43■■■□□ 2.46
DDX49Q9Y6V7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC30.43■■■□□ 2.46
DDX49Q9Y6V7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
DDX49Q9Y6V7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
DDX49Q9Y6V7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
DDX49Q9Y6V7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
DDX49Q9Y6V7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
DDX49Q9Y6V7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.41■■■□□ 2.46
DDX49Q9Y6V7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.4■■■□□ 2.46
DDX49Q9Y6V7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.4■■■□□ 2.46
DDX49Q9Y6V7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
DDX49Q9Y6V7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
DDX49Q9Y6V7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
DDX49Q9Y6V7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
DDX49Q9Y6V7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.38■■■□□ 2.45
DDX49Q9Y6V7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
DDX49Q9Y6V7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
DDX49Q9Y6V7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
DDX49Q9Y6V7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
DDX49Q9Y6V7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.36■■■□□ 2.45
DDX49Q9Y6V7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
DDX49Q9Y6V7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.35■■■□□ 2.45
DDX49Q9Y6V7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.35■■■□□ 2.45
DDX49Q9Y6V7 AC108673.1-201ENST00000510422 1159 ntBASIC30.35■■■□□ 2.45
DDX49Q9Y6V7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
DDX49Q9Y6V7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
DDX49Q9Y6V7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
DDX49Q9Y6V7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
DDX49Q9Y6V7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
DDX49Q9Y6V7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
DDX49Q9Y6V7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
DDX49Q9Y6V7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.34■■■□□ 2.45
DDX49Q9Y6V7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
DDX49Q9Y6V7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
DDX49Q9Y6V7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
DDX49Q9Y6V7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
DDX49Q9Y6V7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
DDX49Q9Y6V7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
DDX49Q9Y6V7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC30.32■■■□□ 2.45
DDX49Q9Y6V7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
DDX49Q9Y6V7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
DDX49Q9Y6V7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
DDX49Q9Y6V7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
DDX49Q9Y6V7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.32■■■□□ 2.44
DDX49Q9Y6V7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.32■■■□□ 2.44
DDX49Q9Y6V7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
DDX49Q9Y6V7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.3■■■□□ 2.44
DDX49Q9Y6V7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
DDX49Q9Y6V7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
DDX49Q9Y6V7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
DDX49Q9Y6V7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.29■■■□□ 2.44
DDX49Q9Y6V7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
DDX49Q9Y6V7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
DDX49Q9Y6V7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC30.29■■■□□ 2.44
DDX49Q9Y6V7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
DDX49Q9Y6V7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
DDX49Q9Y6V7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
DDX49Q9Y6V7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
DDX49Q9Y6V7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
DDX49Q9Y6V7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
DDX49Q9Y6V7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
DDX49Q9Y6V7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
DDX49Q9Y6V7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
DDX49Q9Y6V7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
DDX49Q9Y6V7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC30.25■■■□□ 2.43
DDX49Q9Y6V7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.24■■■□□ 2.43
DDX49Q9Y6V7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
DDX49Q9Y6V7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
DDX49Q9Y6V7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.23■■■□□ 2.43
DDX49Q9Y6V7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
DDX49Q9Y6V7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
DDX49Q9Y6V7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
DDX49Q9Y6V7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.21■■■□□ 2.43
DDX49Q9Y6V7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
DDX49Q9Y6V7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
DDX49Q9Y6V7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.19■■■□□ 2.42
DDX49Q9Y6V7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms