Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HRH3Q9Y5N1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.59■■□□□ 1.37
HRH3Q9Y5N1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HRH3Q9Y5N1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.59■■□□□ 1.37
HRH3Q9Y5N1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.59■■□□□ 1.37
HRH3Q9Y5N1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.59■■□□□ 1.37
HRH3Q9Y5N1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HRH3Q9Y5N1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
HRH3Q9Y5N1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HRH3Q9Y5N1 WHAMMP2-203ENST00000563942 1603 ntBASIC23.59■■□□□ 1.37
HRH3Q9Y5N1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
HRH3Q9Y5N1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.58■■□□□ 1.37
HRH3Q9Y5N1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.58■■□□□ 1.37
HRH3Q9Y5N1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
HRH3Q9Y5N1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
HRH3Q9Y5N1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
HRH3Q9Y5N1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.57■■□□□ 1.36
HRH3Q9Y5N1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
HRH3Q9Y5N1 AC135983.2-203ENST00000454486 1613 ntBASIC23.56■■□□□ 1.36
HRH3Q9Y5N1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
HRH3Q9Y5N1 AL139393.2-201ENST00000608721 2025 ntBASIC23.56■■□□□ 1.36
HRH3Q9Y5N1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
HRH3Q9Y5N1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
HRH3Q9Y5N1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
HRH3Q9Y5N1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
HRH3Q9Y5N1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
HRH3Q9Y5N1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.55■■□□□ 1.36
HRH3Q9Y5N1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
HRH3Q9Y5N1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
HRH3Q9Y5N1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
HRH3Q9Y5N1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
HRH3Q9Y5N1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
HRH3Q9Y5N1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
HRH3Q9Y5N1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
HRH3Q9Y5N1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.53■■□□□ 1.36
HRH3Q9Y5N1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.53■■□□□ 1.36
HRH3Q9Y5N1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.53■■□□□ 1.36
HRH3Q9Y5N1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
HRH3Q9Y5N1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.52■■□□□ 1.36
HRH3Q9Y5N1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
HRH3Q9Y5N1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
HRH3Q9Y5N1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
HRH3Q9Y5N1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.35
HRH3Q9Y5N1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HRH3Q9Y5N1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.51■■□□□ 1.35
HRH3Q9Y5N1 ABCB10P3-201ENST00000561950 2166 ntBASIC23.51■■□□□ 1.35
HRH3Q9Y5N1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.5■■□□□ 1.35
HRH3Q9Y5N1 DUX4L13-201ENST00000554103 1267 ntBASIC23.5■■□□□ 1.35
HRH3Q9Y5N1 DUX4L15-201ENST00000611059 1267 ntBASIC23.5■■□□□ 1.35
HRH3Q9Y5N1 DUX4L23-201ENST00000615195 1269 ntBASIC23.5■■□□□ 1.35
HRH3Q9Y5N1 DUX4L24-201ENST00000617576 1269 ntBASIC23.5■■□□□ 1.35
HRH3Q9Y5N1 DUX4L22-201ENST00000618238 1269 ntBASIC23.5■■□□□ 1.35
HRH3Q9Y5N1 DUX4L20-201ENST00000619712 1269 ntBASIC23.5■■□□□ 1.35
HRH3Q9Y5N1 DUX4L21-201ENST00000622058 1269 ntBASIC23.5■■□□□ 1.35
HRH3Q9Y5N1 DUX4L10-201ENST00000622460 1267 ntBASIC23.5■■□□□ 1.35
HRH3Q9Y5N1 DUX4L25-201ENST00000624915 1269 ntBASIC23.5■■□□□ 1.35
HRH3Q9Y5N1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
HRH3Q9Y5N1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
HRH3Q9Y5N1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
HRH3Q9Y5N1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HRH3Q9Y5N1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HRH3Q9Y5N1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
HRH3Q9Y5N1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HRH3Q9Y5N1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.47■■□□□ 1.35
HRH3Q9Y5N1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HRH3Q9Y5N1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.47■■□□□ 1.35
HRH3Q9Y5N1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HRH3Q9Y5N1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
HRH3Q9Y5N1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
HRH3Q9Y5N1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
HRH3Q9Y5N1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
HRH3Q9Y5N1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.46■■□□□ 1.35
HRH3Q9Y5N1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.45■■□□□ 1.34
HRH3Q9Y5N1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
HRH3Q9Y5N1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
HRH3Q9Y5N1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
HRH3Q9Y5N1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
HRH3Q9Y5N1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.44■■□□□ 1.34
HRH3Q9Y5N1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.44■■□□□ 1.34
HRH3Q9Y5N1 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.44■■□□□ 1.34
HRH3Q9Y5N1 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.43■■□□□ 1.34
HRH3Q9Y5N1 HSD17B1P1-201ENST00000590052 955 ntBASIC23.43■■□□□ 1.34
HRH3Q9Y5N1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.43■■□□□ 1.34
HRH3Q9Y5N1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.43■■□□□ 1.34
HRH3Q9Y5N1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
HRH3Q9Y5N1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.42■■□□□ 1.34
HRH3Q9Y5N1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
HRH3Q9Y5N1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
HRH3Q9Y5N1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
HRH3Q9Y5N1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.42■■□□□ 1.34
HRH3Q9Y5N1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
HRH3Q9Y5N1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
HRH3Q9Y5N1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
HRH3Q9Y5N1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.41■■□□□ 1.34
HRH3Q9Y5N1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
HRH3Q9Y5N1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
HRH3Q9Y5N1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.4■■□□□ 1.34
HRH3Q9Y5N1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.4■■□□□ 1.34
HRH3Q9Y5N1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.4■■□□□ 1.34
HRH3Q9Y5N1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.4■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms