Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGB6Q9Y5F9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.05■■□□□ 1.44
PCDHGB6Q9Y5F9 ST7-AS1-201ENST00000456775 1889 ntBASIC24.04■■□□□ 1.44
PCDHGB6Q9Y5F9 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.04■■□□□ 1.44
PCDHGB6Q9Y5F9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGB6Q9Y5F9 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
PCDHGB6Q9Y5F9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGB6Q9Y5F9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGB6Q9Y5F9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGB6Q9Y5F9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGB6Q9Y5F9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGB6Q9Y5F9 AC016575.1-201ENST00000607026 382 ntBASIC24.02■■□□□ 1.44
PCDHGB6Q9Y5F9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
PCDHGB6Q9Y5F9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.01■■□□□ 1.43
PCDHGB6Q9Y5F9 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHGB6Q9Y5F9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.01■■□□□ 1.43
PCDHGB6Q9Y5F9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.01■■□□□ 1.43
PCDHGB6Q9Y5F9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHGB6Q9Y5F9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
PCDHGB6Q9Y5F9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.01■■□□□ 1.43
PCDHGB6Q9Y5F9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDHGB6Q9Y5F9 CR559946.2-201ENST00000623684 991 ntBASIC24■■□□□ 1.43
PCDHGB6Q9Y5F9 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGB6Q9Y5F9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDHGB6Q9Y5F9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGB6Q9Y5F9 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGB6Q9Y5F9 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGB6Q9Y5F9 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGB6Q9Y5F9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHGB6Q9Y5F9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.97■■□□□ 1.43
PCDHGB6Q9Y5F9 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
PCDHGB6Q9Y5F9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGB6Q9Y5F9 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGB6Q9Y5F9 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
PCDHGB6Q9Y5F9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.95■■□□□ 1.42
PCDHGB6Q9Y5F9 DUX4L13-201ENST00000554103 1267 ntBASIC23.95■■□□□ 1.42
PCDHGB6Q9Y5F9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.95■■□□□ 1.42
PCDHGB6Q9Y5F9 DUX4L15-201ENST00000611059 1267 ntBASIC23.95■■□□□ 1.42
PCDHGB6Q9Y5F9 DUX4L23-201ENST00000615195 1269 ntBASIC23.95■■□□□ 1.42
PCDHGB6Q9Y5F9 DUX4L24-201ENST00000617576 1269 ntBASIC23.95■■□□□ 1.42
PCDHGB6Q9Y5F9 DUX4L22-201ENST00000618238 1269 ntBASIC23.95■■□□□ 1.42
PCDHGB6Q9Y5F9 DUX4L20-201ENST00000619712 1269 ntBASIC23.95■■□□□ 1.42
PCDHGB6Q9Y5F9 DUX4L21-201ENST00000622058 1269 ntBASIC23.95■■□□□ 1.42
PCDHGB6Q9Y5F9 DUX4L10-201ENST00000622460 1267 ntBASIC23.95■■□□□ 1.42
PCDHGB6Q9Y5F9 DUX4L25-201ENST00000624915 1269 ntBASIC23.95■■□□□ 1.42
PCDHGB6Q9Y5F9 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGB6Q9Y5F9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.95■■□□□ 1.42
PCDHGB6Q9Y5F9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
PCDHGB6Q9Y5F9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGB6Q9Y5F9 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGB6Q9Y5F9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGB6Q9Y5F9 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.93■■□□□ 1.42
PCDHGB6Q9Y5F9 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGB6Q9Y5F9 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGB6Q9Y5F9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGB6Q9Y5F9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
PCDHGB6Q9Y5F9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.91■■□□□ 1.42
PCDHGB6Q9Y5F9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGB6Q9Y5F9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGB6Q9Y5F9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.9■■□□□ 1.42
PCDHGB6Q9Y5F9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
PCDHGB6Q9Y5F9 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHGB6Q9Y5F9 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.89■■□□□ 1.42
PCDHGB6Q9Y5F9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHGB6Q9Y5F9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHGB6Q9Y5F9 AC010864.1-201ENST00000609407 1511 ntBASIC23.89■■□□□ 1.41
PCDHGB6Q9Y5F9 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.89■■□□□ 1.41
PCDHGB6Q9Y5F9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.89■■□□□ 1.41
PCDHGB6Q9Y5F9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.88■■□□□ 1.41
PCDHGB6Q9Y5F9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.88■■□□□ 1.41
PCDHGB6Q9Y5F9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGB6Q9Y5F9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGB6Q9Y5F9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
PCDHGB6Q9Y5F9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHGB6Q9Y5F9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGB6Q9Y5F9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGB6Q9Y5F9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGB6Q9Y5F9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGB6Q9Y5F9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGB6Q9Y5F9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGB6Q9Y5F9 LINC00273-201ENST00000539813 1452 ntBASIC23.86■■□□□ 1.41
PCDHGB6Q9Y5F9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGB6Q9Y5F9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGB6Q9Y5F9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
PCDHGB6Q9Y5F9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGB6Q9Y5F9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGB6Q9Y5F9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGB6Q9Y5F9 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.85■■□□□ 1.41
PCDHGB6Q9Y5F9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGB6Q9Y5F9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.84■■□□□ 1.41
PCDHGB6Q9Y5F9 AC135731.1-201ENST00000569415 2548 ntBASIC23.84■■□□□ 1.41
PCDHGB6Q9Y5F9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGB6Q9Y5F9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.84■■□□□ 1.41
PCDHGB6Q9Y5F9 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.83■■□□□ 1.41
PCDHGB6Q9Y5F9 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDHGB6Q9Y5F9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.82■■□□□ 1.4
PCDHGB6Q9Y5F9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGB6Q9Y5F9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGB6Q9Y5F9 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
PCDHGB6Q9Y5F9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms