Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC37.62■■■■□ 3.61
STAG3Q9UJ98 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC37.62■■■■□ 3.61
STAG3Q9UJ98 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC37.61■■■■□ 3.61
STAG3Q9UJ98 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC37.61■■■■□ 3.61
STAG3Q9UJ98 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC37.6■■■■□ 3.61
STAG3Q9UJ98 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC37.59■■■■□ 3.61
STAG3Q9UJ98 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC37.59■■■■□ 3.61
STAG3Q9UJ98 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC37.58■■■■□ 3.61
STAG3Q9UJ98 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
STAG3Q9UJ98 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC37.58■■■■□ 3.61
STAG3Q9UJ98 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC37.58■■■■□ 3.61
STAG3Q9UJ98 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC37.57■■■■□ 3.6
STAG3Q9UJ98 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.6
STAG3Q9UJ98 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC37.56■■■■□ 3.6
STAG3Q9UJ98 CHST11-203ENST00000547956 936 ntTSL 2 BASIC37.56■■■■□ 3.6
STAG3Q9UJ98 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
STAG3Q9UJ98 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC37.55■■■■□ 3.6
STAG3Q9UJ98 U85056.1-201ENST00000616429 682 ntBASIC37.53■■■■□ 3.6
STAG3Q9UJ98 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC37.53■■■■□ 3.6
STAG3Q9UJ98 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC37.52■■■■□ 3.6
STAG3Q9UJ98 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC37.52■■■■□ 3.6
STAG3Q9UJ98 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC37.52■■■■□ 3.6
STAG3Q9UJ98 HYI-213ENST00000583037 1322 ntTSL 5 BASIC37.52■■■■□ 3.6
STAG3Q9UJ98 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC37.51■■■■□ 3.6
STAG3Q9UJ98 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC37.51■■■■□ 3.6
STAG3Q9UJ98 AC018358.1-201ENST00000631079 1402 ntBASIC37.51■■■■□ 3.59
STAG3Q9UJ98 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC37.51■■■■□ 3.59
STAG3Q9UJ98 WHAMMP2-203ENST00000563942 1603 ntBASIC37.5■■■■□ 3.59
STAG3Q9UJ98 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC37.5■■■■□ 3.59
STAG3Q9UJ98 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC37.5■■■■□ 3.59
STAG3Q9UJ98 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC37.48■■■■□ 3.59
STAG3Q9UJ98 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC37.48■■■■□ 3.59
STAG3Q9UJ98 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC37.48■■■■□ 3.59
STAG3Q9UJ98 AC135983.2-203ENST00000454486 1613 ntBASIC37.47■■■■□ 3.59
STAG3Q9UJ98 AC127502.1-201ENST00000399971 1502 ntBASIC37.47■■■■□ 3.59
STAG3Q9UJ98 AC060814.1-201ENST00000554326 538 ntBASIC37.46■■■■□ 3.59
STAG3Q9UJ98 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC37.45■■■■□ 3.59
STAG3Q9UJ98 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC37.44■■■■□ 3.58
STAG3Q9UJ98 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC37.44■■■■□ 3.58
STAG3Q9UJ98 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
STAG3Q9UJ98 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
STAG3Q9UJ98 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
STAG3Q9UJ98 AC110285.7-201ENST00000624417 1536 ntBASIC37.41■■■■□ 3.58
STAG3Q9UJ98 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC37.39■■■■□ 3.58
STAG3Q9UJ98 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC37.39■■■■□ 3.58
STAG3Q9UJ98 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC37.38■■■■□ 3.57
STAG3Q9UJ98 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC37.38■■■■□ 3.57
STAG3Q9UJ98 AC148477.6-201ENST00000623746 465 ntBASIC37.38■■■■□ 3.57
STAG3Q9UJ98 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
STAG3Q9UJ98 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC37.36■■■■□ 3.57
STAG3Q9UJ98 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC37.36■■■■□ 3.57
STAG3Q9UJ98 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC37.36■■■■□ 3.57
STAG3Q9UJ98 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC37.36■■■■□ 3.57
STAG3Q9UJ98 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC37.35■■■■□ 3.57
STAG3Q9UJ98 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC37.35■■■■□ 3.57
STAG3Q9UJ98 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC37.34■■■■□ 3.57
STAG3Q9UJ98 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC37.34■■■■□ 3.57
STAG3Q9UJ98 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC37.33■■■■□ 3.57
STAG3Q9UJ98 TSPY13P-201ENST00000338964 914 ntBASIC37.33■■■■□ 3.57
STAG3Q9UJ98 GFER-205ENST00000569451 517 ntTSL 5 BASIC37.33■■■■□ 3.57
STAG3Q9UJ98 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
STAG3Q9UJ98 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC37.32■■■■□ 3.57
STAG3Q9UJ98 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC37.32■■■■□ 3.56
STAG3Q9UJ98 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC37.31■■■■□ 3.56
STAG3Q9UJ98 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
STAG3Q9UJ98 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC37.31■■■■□ 3.56
STAG3Q9UJ98 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC37.3■■■■□ 3.56
STAG3Q9UJ98 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC37.29■■■■□ 3.56
STAG3Q9UJ98 AC004987.1-201ENST00000428627 508 ntBASIC37.29■■■■□ 3.56
STAG3Q9UJ98 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
STAG3Q9UJ98 KRT18P60-201ENST00000312876 1297 ntBASIC37.28■■■■□ 3.56
STAG3Q9UJ98 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC37.28■■■■□ 3.56
STAG3Q9UJ98 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC37.27■■■■□ 3.56
STAG3Q9UJ98 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC37.26■■■■□ 3.56
STAG3Q9UJ98 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.55
STAG3Q9UJ98 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC37.26■■■■□ 3.55
STAG3Q9UJ98 MIR219A2-201ENST00000608502 1504 ntBASIC37.26■■■■□ 3.55
STAG3Q9UJ98 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
STAG3Q9UJ98 ATP5G2P3-201ENST00000429083 425 ntBASIC37.25■■■■□ 3.55
STAG3Q9UJ98 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC37.25■■■■□ 3.55
STAG3Q9UJ98 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC37.24■■■■□ 3.55
STAG3Q9UJ98 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
STAG3Q9UJ98 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC37.24■■■■□ 3.55
STAG3Q9UJ98 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC37.24■■■■□ 3.55
STAG3Q9UJ98 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
STAG3Q9UJ98 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC37.23■■■■□ 3.55
STAG3Q9UJ98 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
STAG3Q9UJ98 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
STAG3Q9UJ98 AC092296.2-201ENST00000589470 999 ntBASIC37.22■■■■□ 3.55
STAG3Q9UJ98 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC37.21■■■■□ 3.55
STAG3Q9UJ98 RPS2-210ENST00000530225 765 ntTSL 2 BASIC37.21■■■■□ 3.55
STAG3Q9UJ98 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC37.2■■■■□ 3.55
STAG3Q9UJ98 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
STAG3Q9UJ98 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC37.2■■■■□ 3.55
STAG3Q9UJ98 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC37.19■■■■□ 3.54
STAG3Q9UJ98 GUK1-208ENST00000366728 842 ntTSL 2 BASIC37.19■■■■□ 3.54
STAG3Q9UJ98 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC37.19■■■■□ 3.54
STAG3Q9UJ98 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC37.18■■■■□ 3.54
STAG3Q9UJ98 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC37.18■■■■□ 3.54
STAG3Q9UJ98 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms