Protein–RNA interactions for Protein: Q9NQX3

GPHN, Gephyrin, humanhuman

Predicted RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPHNQ9NQX3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
GPHNQ9NQX3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
GPHNQ9NQX3 DUX4L29-201ENST00000425409 679 ntBASIC30.35■■■□□ 2.45
GPHNQ9NQX3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.35■■■□□ 2.45
GPHNQ9NQX3 WHAMMP2-203ENST00000563942 1603 ntBASIC30.34■■■□□ 2.45
GPHNQ9NQX3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.33■■■□□ 2.45
GPHNQ9NQX3 AC135983.2-203ENST00000454486 1613 ntBASIC30.33■■■□□ 2.45
GPHNQ9NQX3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
GPHNQ9NQX3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
GPHNQ9NQX3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
GPHNQ9NQX3 LINC00273-201ENST00000539813 1452 ntBASIC30.32■■■□□ 2.44
GPHNQ9NQX3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
GPHNQ9NQX3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
GPHNQ9NQX3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.32■■■□□ 2.44
GPHNQ9NQX3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.32■■■□□ 2.44
GPHNQ9NQX3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.32■■■□□ 2.44
GPHNQ9NQX3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
GPHNQ9NQX3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.31■■■□□ 2.44
GPHNQ9NQX3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
GPHNQ9NQX3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
GPHNQ9NQX3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
GPHNQ9NQX3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
GPHNQ9NQX3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.3■■■□□ 2.44
GPHNQ9NQX3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
GPHNQ9NQX3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
GPHNQ9NQX3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.28■■■□□ 2.44
GPHNQ9NQX3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
GPHNQ9NQX3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
GPHNQ9NQX3 AC100797.4-201ENST00000631653 1827 ntBASIC30.27■■■□□ 2.44
GPHNQ9NQX3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
GPHNQ9NQX3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
GPHNQ9NQX3 AP004833.2-201ENST00000532228 1454 ntBASIC30.26■■■□□ 2.44
GPHNQ9NQX3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
GPHNQ9NQX3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
GPHNQ9NQX3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.26■■■□□ 2.43
GPHNQ9NQX3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
GPHNQ9NQX3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
GPHNQ9NQX3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.25■■■□□ 2.43
GPHNQ9NQX3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
GPHNQ9NQX3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.24■■■□□ 2.43
GPHNQ9NQX3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
GPHNQ9NQX3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
GPHNQ9NQX3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.24■■■□□ 2.43
GPHNQ9NQX3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
GPHNQ9NQX3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.23■■■□□ 2.43
GPHNQ9NQX3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.23■■■□□ 2.43
GPHNQ9NQX3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.23■■■□□ 2.43
GPHNQ9NQX3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
GPHNQ9NQX3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
GPHNQ9NQX3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.22■■■□□ 2.43
GPHNQ9NQX3 DRD5P2-201ENST00000421395 2012 ntBASIC30.22■■■□□ 2.43
GPHNQ9NQX3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.22■■■□□ 2.43
GPHNQ9NQX3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
GPHNQ9NQX3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
GPHNQ9NQX3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.21■■■□□ 2.43
GPHNQ9NQX3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.21■■■□□ 2.43
GPHNQ9NQX3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.2■■■□□ 2.43
GPHNQ9NQX3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
GPHNQ9NQX3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
GPHNQ9NQX3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
GPHNQ9NQX3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
GPHNQ9NQX3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
GPHNQ9NQX3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
GPHNQ9NQX3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
GPHNQ9NQX3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.18■■■□□ 2.42
GPHNQ9NQX3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
GPHNQ9NQX3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
GPHNQ9NQX3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.17■■■□□ 2.42
GPHNQ9NQX3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.16■■■□□ 2.42
GPHNQ9NQX3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.15■■■□□ 2.42
GPHNQ9NQX3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.15■■■□□ 2.42
GPHNQ9NQX3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
GPHNQ9NQX3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.14■■■□□ 2.42
GPHNQ9NQX3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC30.13■■■□□ 2.41
GPHNQ9NQX3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
GPHNQ9NQX3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
GPHNQ9NQX3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
GPHNQ9NQX3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
GPHNQ9NQX3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
GPHNQ9NQX3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
GPHNQ9NQX3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
GPHNQ9NQX3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
GPHNQ9NQX3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.1■■■□□ 2.41
GPHNQ9NQX3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
GPHNQ9NQX3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.09■■■□□ 2.41
GPHNQ9NQX3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
GPHNQ9NQX3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
GPHNQ9NQX3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.07■■■□□ 2.4
GPHNQ9NQX3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
GPHNQ9NQX3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.06■■■□□ 2.4
GPHNQ9NQX3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
GPHNQ9NQX3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
GPHNQ9NQX3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.05■■■□□ 2.4
GPHNQ9NQX3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.05■■■□□ 2.4
GPHNQ9NQX3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.05■■■□□ 2.4
GPHNQ9NQX3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.05■■■□□ 2.4
GPHNQ9NQX3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.05■■■□□ 2.4
GPHNQ9NQX3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
GPHNQ9NQX3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
GPHNQ9NQX3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms