Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
C12orf4Q9NQ89 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
C12orf4Q9NQ89 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.91■■□□□ 1.1
C12orf4Q9NQ89 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
C12orf4Q9NQ89 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.9■■□□□ 1.1
C12orf4Q9NQ89 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.9■■□□□ 1.1
C12orf4Q9NQ89 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
C12orf4Q9NQ89 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
C12orf4Q9NQ89 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
C12orf4Q9NQ89 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.89■■□□□ 1.1
C12orf4Q9NQ89 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.89■■□□□ 1.1
C12orf4Q9NQ89 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
C12orf4Q9NQ89 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
C12orf4Q9NQ89 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
C12orf4Q9NQ89 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
C12orf4Q9NQ89 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
C12orf4Q9NQ89 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
C12orf4Q9NQ89 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
C12orf4Q9NQ89 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
C12orf4Q9NQ89 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.87■■□□□ 1.09
C12orf4Q9NQ89 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
C12orf4Q9NQ89 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.87■■□□□ 1.09
C12orf4Q9NQ89 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.87■■□□□ 1.09
C12orf4Q9NQ89 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
C12orf4Q9NQ89 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
C12orf4Q9NQ89 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.86■■□□□ 1.09
C12orf4Q9NQ89 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
C12orf4Q9NQ89 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
C12orf4Q9NQ89 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
C12orf4Q9NQ89 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
C12orf4Q9NQ89 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
C12orf4Q9NQ89 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
C12orf4Q9NQ89 RARRES2P7-201ENST00000567349 469 ntBASIC21.84■■□□□ 1.09
C12orf4Q9NQ89 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.83■■□□□ 1.09
C12orf4Q9NQ89 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.83■■□□□ 1.08
C12orf4Q9NQ89 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
C12orf4Q9NQ89 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
C12orf4Q9NQ89 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
C12orf4Q9NQ89 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C12orf4Q9NQ89 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C12orf4Q9NQ89 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C12orf4Q9NQ89 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
C12orf4Q9NQ89 SETD8P1-201ENST00000623146 1180 ntBASIC21.8■■□□□ 1.08
C12orf4Q9NQ89 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
C12orf4Q9NQ89 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.79■■□□□ 1.08
C12orf4Q9NQ89 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
C12orf4Q9NQ89 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
C12orf4Q9NQ89 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C12orf4Q9NQ89 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C12orf4Q9NQ89 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C12orf4Q9NQ89 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
C12orf4Q9NQ89 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
C12orf4Q9NQ89 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.78■■□□□ 1.08
C12orf4Q9NQ89 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.78■■□□□ 1.08
C12orf4Q9NQ89 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
C12orf4Q9NQ89 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
C12orf4Q9NQ89 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.77■■□□□ 1.07
C12orf4Q9NQ89 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.76■■□□□ 1.07
C12orf4Q9NQ89 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
C12orf4Q9NQ89 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
C12orf4Q9NQ89 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.76■■□□□ 1.07
C12orf4Q9NQ89 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
C12orf4Q9NQ89 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
C12orf4Q9NQ89 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.75■■□□□ 1.07
C12orf4Q9NQ89 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
C12orf4Q9NQ89 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
C12orf4Q9NQ89 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
C12orf4Q9NQ89 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
C12orf4Q9NQ89 AP004833.2-201ENST00000532228 1454 ntBASIC21.74■■□□□ 1.07
C12orf4Q9NQ89 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
C12orf4Q9NQ89 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.74■■□□□ 1.07
C12orf4Q9NQ89 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
C12orf4Q9NQ89 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
C12orf4Q9NQ89 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
C12orf4Q9NQ89 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
C12orf4Q9NQ89 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
C12orf4Q9NQ89 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
C12orf4Q9NQ89 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
C12orf4Q9NQ89 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.72■■□□□ 1.07
C12orf4Q9NQ89 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
C12orf4Q9NQ89 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
C12orf4Q9NQ89 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
C12orf4Q9NQ89 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
C12orf4Q9NQ89 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
C12orf4Q9NQ89 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
C12orf4Q9NQ89 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
C12orf4Q9NQ89 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
C12orf4Q9NQ89 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
C12orf4Q9NQ89 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
C12orf4Q9NQ89 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
C12orf4Q9NQ89 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.7■■□□□ 1.06
C12orf4Q9NQ89 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
C12orf4Q9NQ89 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
C12orf4Q9NQ89 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
C12orf4Q9NQ89 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
C12orf4Q9NQ89 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.69■■□□□ 1.06
C12orf4Q9NQ89 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.69■■□□□ 1.06
C12orf4Q9NQ89 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
C12orf4Q9NQ89 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
C12orf4Q9NQ89 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms