Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.99■■■□□ 2.39
ZFYVE28Q9HCC9 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ZFYVE28Q9HCC9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC29.99■■■□□ 2.39
ZFYVE28Q9HCC9 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
ZFYVE28Q9HCC9 AL161658.1-201ENST00000623641 1967 ntBASIC29.98■■■□□ 2.39
ZFYVE28Q9HCC9 TSPY13P-201ENST00000338964 914 ntBASIC29.98■■■□□ 2.39
ZFYVE28Q9HCC9 AC060814.1-201ENST00000554326 538 ntBASIC29.98■■■□□ 2.39
ZFYVE28Q9HCC9 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
ZFYVE28Q9HCC9 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
ZFYVE28Q9HCC9 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC29.97■■■□□ 2.39
ZFYVE28Q9HCC9 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
ZFYVE28Q9HCC9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
ZFYVE28Q9HCC9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
ZFYVE28Q9HCC9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
ZFYVE28Q9HCC9 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC29.95■■■□□ 2.39
ZFYVE28Q9HCC9 GFER-205ENST00000569451 517 ntTSL 5 BASIC29.95■■■□□ 2.39
ZFYVE28Q9HCC9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.95■■■□□ 2.38
ZFYVE28Q9HCC9 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
ZFYVE28Q9HCC9 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
ZFYVE28Q9HCC9 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC29.94■■■□□ 2.38
ZFYVE28Q9HCC9 AC004987.1-201ENST00000428627 508 ntBASIC29.92■■■□□ 2.38
ZFYVE28Q9HCC9 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
ZFYVE28Q9HCC9 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
ZFYVE28Q9HCC9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
ZFYVE28Q9HCC9 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
ZFYVE28Q9HCC9 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
ZFYVE28Q9HCC9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
ZFYVE28Q9HCC9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
ZFYVE28Q9HCC9 ATP5G2P3-201ENST00000429083 425 ntBASIC29.9■■■□□ 2.38
ZFYVE28Q9HCC9 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.9■■■□□ 2.38
ZFYVE28Q9HCC9 AC148477.6-201ENST00000623746 465 ntBASIC29.9■■■□□ 2.38
ZFYVE28Q9HCC9 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
ZFYVE28Q9HCC9 KRT18P60-201ENST00000312876 1297 ntBASIC29.89■■■□□ 2.38
ZFYVE28Q9HCC9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC29.89■■■□□ 2.38
ZFYVE28Q9HCC9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC29.89■■■□□ 2.38
ZFYVE28Q9HCC9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC29.89■■■□□ 2.38
ZFYVE28Q9HCC9 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.88■■■□□ 2.37
ZFYVE28Q9HCC9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC29.88■■■□□ 2.37
ZFYVE28Q9HCC9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC29.88■■■□□ 2.37
ZFYVE28Q9HCC9 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
ZFYVE28Q9HCC9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
ZFYVE28Q9HCC9 RARRES2P1-201ENST00000474487 481 ntBASIC29.87■■■□□ 2.37
ZFYVE28Q9HCC9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
ZFYVE28Q9HCC9 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.87■■■□□ 2.37
ZFYVE28Q9HCC9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
ZFYVE28Q9HCC9 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
ZFYVE28Q9HCC9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC29.86■■■□□ 2.37
ZFYVE28Q9HCC9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
ZFYVE28Q9HCC9 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
ZFYVE28Q9HCC9 WHAMMP2-203ENST00000563942 1603 ntBASIC29.85■■■□□ 2.37
ZFYVE28Q9HCC9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC29.85■■■□□ 2.37
ZFYVE28Q9HCC9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
ZFYVE28Q9HCC9 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC29.85■■■□□ 2.37
ZFYVE28Q9HCC9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC29.85■■■□□ 2.37
ZFYVE28Q9HCC9 AC135983.2-203ENST00000454486 1613 ntBASIC29.85■■■□□ 2.37
ZFYVE28Q9HCC9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
ZFYVE28Q9HCC9 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
ZFYVE28Q9HCC9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
ZFYVE28Q9HCC9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC29.84■■■□□ 2.37
ZFYVE28Q9HCC9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC29.84■■■□□ 2.37
ZFYVE28Q9HCC9 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
ZFYVE28Q9HCC9 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
ZFYVE28Q9HCC9 AC110285.7-201ENST00000624417 1536 ntBASIC29.82■■■□□ 2.36
ZFYVE28Q9HCC9 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC29.81■■■□□ 2.36
ZFYVE28Q9HCC9 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC29.81■■■□□ 2.36
ZFYVE28Q9HCC9 AC092296.2-201ENST00000589470 999 ntBASIC29.8■■■□□ 2.36
ZFYVE28Q9HCC9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.79■■■□□ 2.36
ZFYVE28Q9HCC9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
ZFYVE28Q9HCC9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC29.79■■■□□ 2.36
ZFYVE28Q9HCC9 AC127502.1-201ENST00000399971 1502 ntBASIC29.79■■■□□ 2.36
ZFYVE28Q9HCC9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
ZFYVE28Q9HCC9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC29.78■■■□□ 2.36
ZFYVE28Q9HCC9 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.78■■■□□ 2.36
ZFYVE28Q9HCC9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.36
ZFYVE28Q9HCC9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.36
ZFYVE28Q9HCC9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
ZFYVE28Q9HCC9 ECEL1P2-201ENST00000461596 1295 ntBASIC29.76■■■□□ 2.35
ZFYVE28Q9HCC9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
ZFYVE28Q9HCC9 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
ZFYVE28Q9HCC9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
ZFYVE28Q9HCC9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
ZFYVE28Q9HCC9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
ZFYVE28Q9HCC9 MIR219A2-201ENST00000608502 1504 ntBASIC29.74■■■□□ 2.35
ZFYVE28Q9HCC9 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
ZFYVE28Q9HCC9 RPS2-210ENST00000530225 765 ntTSL 2 BASIC29.73■■■□□ 2.35
ZFYVE28Q9HCC9 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
ZFYVE28Q9HCC9 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
ZFYVE28Q9HCC9 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
ZFYVE28Q9HCC9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
ZFYVE28Q9HCC9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
ZFYVE28Q9HCC9 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29.71■■■□□ 2.35
ZFYVE28Q9HCC9 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.7■■■□□ 2.35
ZFYVE28Q9HCC9 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
ZFYVE28Q9HCC9 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
ZFYVE28Q9HCC9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
ZFYVE28Q9HCC9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC29.7■■■□□ 2.35
ZFYVE28Q9HCC9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
ZFYVE28Q9HCC9 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC29.69■■■□□ 2.34
ZFYVE28Q9HCC9 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
ZFYVE28Q9HCC9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms