Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
NUCKS1Q9H1E3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.77■■■□□ 2.04
NUCKS1Q9H1E3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.77■■■□□ 2.04
NUCKS1Q9H1E3 DUX4L28-201ENST00000623687 678 ntBASIC27.77■■■□□ 2.04
NUCKS1Q9H1E3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
NUCKS1Q9H1E3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
NUCKS1Q9H1E3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.76■■■□□ 2.03
NUCKS1Q9H1E3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
NUCKS1Q9H1E3 BX255925.1-201ENST00000566954 1854 ntBASIC27.75■■■□□ 2.03
NUCKS1Q9H1E3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
NUCKS1Q9H1E3 AC005559.1-201ENST00000589661 871 ntBASIC27.75■■■□□ 2.03
NUCKS1Q9H1E3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
NUCKS1Q9H1E3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
NUCKS1Q9H1E3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
NUCKS1Q9H1E3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
NUCKS1Q9H1E3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
NUCKS1Q9H1E3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
NUCKS1Q9H1E3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
NUCKS1Q9H1E3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.74■■■□□ 2.03
NUCKS1Q9H1E3 MIR3665-201ENST00000578708 105 ntBASIC27.73■■■□□ 2.03
NUCKS1Q9H1E3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
NUCKS1Q9H1E3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
NUCKS1Q9H1E3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
NUCKS1Q9H1E3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
NUCKS1Q9H1E3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
NUCKS1Q9H1E3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.71■■■□□ 2.03
NUCKS1Q9H1E3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
NUCKS1Q9H1E3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
NUCKS1Q9H1E3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
NUCKS1Q9H1E3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.7■■■□□ 2.03
NUCKS1Q9H1E3 AL121749.1-202ENST00000609313 2153 ntBASIC27.7■■■□□ 2.03
NUCKS1Q9H1E3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
NUCKS1Q9H1E3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
NUCKS1Q9H1E3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.7■■■□□ 2.02
NUCKS1Q9H1E3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
NUCKS1Q9H1E3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
NUCKS1Q9H1E3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.69■■■□□ 2.02
NUCKS1Q9H1E3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
NUCKS1Q9H1E3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.69■■■□□ 2.02
NUCKS1Q9H1E3 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
NUCKS1Q9H1E3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
NUCKS1Q9H1E3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC27.67■■■□□ 2.02
NUCKS1Q9H1E3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
NUCKS1Q9H1E3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
NUCKS1Q9H1E3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
NUCKS1Q9H1E3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
NUCKS1Q9H1E3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
NUCKS1Q9H1E3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
NUCKS1Q9H1E3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
NUCKS1Q9H1E3 AC087741.3-201ENST00000624270 1347 ntBASIC27.64■■■□□ 2.01
NUCKS1Q9H1E3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
NUCKS1Q9H1E3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
NUCKS1Q9H1E3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
NUCKS1Q9H1E3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.62■■■□□ 2.01
NUCKS1Q9H1E3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
NUCKS1Q9H1E3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
NUCKS1Q9H1E3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC27.61■■■□□ 2.01
NUCKS1Q9H1E3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
NUCKS1Q9H1E3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
NUCKS1Q9H1E3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
NUCKS1Q9H1E3 LINC01003-201ENST00000564834 1764 ntBASIC27.6■■■□□ 2.01
NUCKS1Q9H1E3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.6■■■□□ 2.01
NUCKS1Q9H1E3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.59■■■□□ 2.01
NUCKS1Q9H1E3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
NUCKS1Q9H1E3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
NUCKS1Q9H1E3 AC100797.4-201ENST00000631653 1827 ntBASIC27.58■■■□□ 2.01
NUCKS1Q9H1E3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.58■■■□□ 2.01
NUCKS1Q9H1E3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
NUCKS1Q9H1E3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
NUCKS1Q9H1E3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
NUCKS1Q9H1E3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC27.57■■■□□ 2
NUCKS1Q9H1E3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.57■■■□□ 2
NUCKS1Q9H1E3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.56■■■□□ 2
NUCKS1Q9H1E3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
NUCKS1Q9H1E3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.56■■■□□ 2
NUCKS1Q9H1E3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.55■■■□□ 2
NUCKS1Q9H1E3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
NUCKS1Q9H1E3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
NUCKS1Q9H1E3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
NUCKS1Q9H1E3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
NUCKS1Q9H1E3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC27.54■■■□□ 2
NUCKS1Q9H1E3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
NUCKS1Q9H1E3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.53■■■□□ 2
NUCKS1Q9H1E3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.52■■■□□ 2
NUCKS1Q9H1E3 AP002414.2-202ENST00000590929 1450 ntBASIC27.52■■■□□ 2
NUCKS1Q9H1E3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
NUCKS1Q9H1E3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
NUCKS1Q9H1E3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.52■■■□□ 2
NUCKS1Q9H1E3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.52■■■□□ 2
NUCKS1Q9H1E3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
NUCKS1Q9H1E3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.51■■□□□ 1.99
NUCKS1Q9H1E3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC27.51■■□□□ 1.99
NUCKS1Q9H1E3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
NUCKS1Q9H1E3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
NUCKS1Q9H1E3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
NUCKS1Q9H1E3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
NUCKS1Q9H1E3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
NUCKS1Q9H1E3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.49■■□□□ 1.99
NUCKS1Q9H1E3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
NUCKS1Q9H1E3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.49■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms