Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM3Q9BZL3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.86■□□□□ 0.93
SMIM3Q9BZL3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM3Q9BZL3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM3Q9BZL3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM3Q9BZL3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM3Q9BZL3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM3Q9BZL3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM3Q9BZL3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMIM3Q9BZL3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMIM3Q9BZL3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SMIM3Q9BZL3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.83■□□□□ 0.93
SMIM3Q9BZL3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMIM3Q9BZL3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMIM3Q9BZL3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMIM3Q9BZL3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.83■□□□□ 0.92
SMIM3Q9BZL3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SMIM3Q9BZL3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM3Q9BZL3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM3Q9BZL3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM3Q9BZL3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM3Q9BZL3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SMIM3Q9BZL3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.81■□□□□ 0.92
SMIM3Q9BZL3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SMIM3Q9BZL3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.81■□□□□ 0.92
SMIM3Q9BZL3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.81■□□□□ 0.92
SMIM3Q9BZL3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM3Q9BZL3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM3Q9BZL3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.8■□□□□ 0.92
SMIM3Q9BZL3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM3Q9BZL3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM3Q9BZL3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM3Q9BZL3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.79■□□□□ 0.92
SMIM3Q9BZL3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC20.79■□□□□ 0.92
SMIM3Q9BZL3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
SMIM3Q9BZL3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
SMIM3Q9BZL3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM3Q9BZL3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SMIM3Q9BZL3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM3Q9BZL3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
SMIM3Q9BZL3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SMIM3Q9BZL3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM3Q9BZL3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM3Q9BZL3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM3Q9BZL3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM3Q9BZL3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.75■□□□□ 0.91
SMIM3Q9BZL3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.75■□□□□ 0.91
SMIM3Q9BZL3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM3Q9BZL3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM3Q9BZL3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM3Q9BZL3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM3Q9BZL3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.74■□□□□ 0.91
SMIM3Q9BZL3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM3Q9BZL3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM3Q9BZL3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM3Q9BZL3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM3Q9BZL3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.73■□□□□ 0.91
SMIM3Q9BZL3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.73■□□□□ 0.91
SMIM3Q9BZL3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM3Q9BZL3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.73■□□□□ 0.91
SMIM3Q9BZL3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM3Q9BZL3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM3Q9BZL3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM3Q9BZL3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM3Q9BZL3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM3Q9BZL3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM3Q9BZL3 LINC01003-201ENST00000564834 1764 ntBASIC20.72■□□□□ 0.91
SMIM3Q9BZL3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMIM3Q9BZL3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.71■□□□□ 0.91
SMIM3Q9BZL3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMIM3Q9BZL3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.71■□□□□ 0.91
SMIM3Q9BZL3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMIM3Q9BZL3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
SMIM3Q9BZL3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMIM3Q9BZL3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SMIM3Q9BZL3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMIM3Q9BZL3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMIM3Q9BZL3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMIM3Q9BZL3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
SMIM3Q9BZL3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMIM3Q9BZL3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMIM3Q9BZL3 AC010864.1-201ENST00000609407 1511 ntBASIC20.69■□□□□ 0.9
SMIM3Q9BZL3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMIM3Q9BZL3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.69■□□□□ 0.9
SMIM3Q9BZL3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.69■□□□□ 0.9
SMIM3Q9BZL3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMIM3Q9BZL3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.68■□□□□ 0.9
SMIM3Q9BZL3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMIM3Q9BZL3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMIM3Q9BZL3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.67■□□□□ 0.9
SMIM3Q9BZL3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMIM3Q9BZL3 AC091060.1-201ENST00000623524 1766 ntBASIC20.67■□□□□ 0.9
SMIM3Q9BZL3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.67■□□□□ 0.9
SMIM3Q9BZL3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMIM3Q9BZL3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMIM3Q9BZL3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMIM3Q9BZL3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.66■□□□□ 0.9
SMIM3Q9BZL3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMIM3Q9BZL3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMIM3Q9BZL3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms