Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
PCDH11XQ9BZA7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
PCDH11XQ9BZA7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
PCDH11XQ9BZA7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
PCDH11XQ9BZA7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC34.02■■■■□ 3.04
PCDH11XQ9BZA7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC34.02■■■■□ 3.04
PCDH11XQ9BZA7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC34.01■■■■□ 3.03
PCDH11XQ9BZA7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC34■■■■□ 3.03
PCDH11XQ9BZA7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC33.99■■■■□ 3.03
PCDH11XQ9BZA7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC33.99■■■■□ 3.03
PCDH11XQ9BZA7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC33.99■■■■□ 3.03
PCDH11XQ9BZA7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
PCDH11XQ9BZA7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC33.97■■■■□ 3.03
PCDH11XQ9BZA7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
PCDH11XQ9BZA7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC33.97■■■■□ 3.03
PCDH11XQ9BZA7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
PCDH11XQ9BZA7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC33.97■■■■□ 3.03
PCDH11XQ9BZA7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC33.96■■■■□ 3.03
PCDH11XQ9BZA7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC33.96■■■■□ 3.03
PCDH11XQ9BZA7 NTF6A-201ENST00000591175 560 ntBASIC33.96■■■■□ 3.03
PCDH11XQ9BZA7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
PCDH11XQ9BZA7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
PCDH11XQ9BZA7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC33.93■■■■□ 3.02
PCDH11XQ9BZA7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC33.93■■■■□ 3.02
PCDH11XQ9BZA7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC33.93■■■■□ 3.02
PCDH11XQ9BZA7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC33.92■■■■□ 3.02
PCDH11XQ9BZA7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC33.92■■■■□ 3.02
PCDH11XQ9BZA7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC33.92■■■■□ 3.02
PCDH11XQ9BZA7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC33.92■■■■□ 3.02
PCDH11XQ9BZA7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC33.91■■■■□ 3.02
PCDH11XQ9BZA7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC33.91■■■■□ 3.02
PCDH11XQ9BZA7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC33.91■■■■□ 3.02
PCDH11XQ9BZA7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
PCDH11XQ9BZA7 AC110285.7-201ENST00000624417 1536 ntBASIC33.89■■■■□ 3.02
PCDH11XQ9BZA7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC33.88■■■■□ 3.01
PCDH11XQ9BZA7 AC148477.6-201ENST00000623746 465 ntBASIC33.88■■■■□ 3.01
PCDH11XQ9BZA7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
PCDH11XQ9BZA7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
PCDH11XQ9BZA7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
PCDH11XQ9BZA7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC33.86■■■■□ 3.01
PCDH11XQ9BZA7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC33.86■■■■□ 3.01
PCDH11XQ9BZA7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
PCDH11XQ9BZA7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC33.85■■■■□ 3.01
PCDH11XQ9BZA7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC33.85■■■■□ 3.01
PCDH11XQ9BZA7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC33.85■■■■□ 3.01
PCDH11XQ9BZA7 AC012354.3-201ENST00000623734 483 ntBASIC33.85■■■■□ 3.01
PCDH11XQ9BZA7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
PCDH11XQ9BZA7 AL135925.1-201ENST00000605920 1701 ntBASIC33.84■■■■□ 3.01
PCDH11XQ9BZA7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC33.83■■■■□ 3.01
PCDH11XQ9BZA7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC33.83■■■■□ 3.01
PCDH11XQ9BZA7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC33.82■■■■□ 3
PCDH11XQ9BZA7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC33.82■■■■□ 3
PCDH11XQ9BZA7 AC060814.1-201ENST00000554326 538 ntBASIC33.81■■■■□ 3
PCDH11XQ9BZA7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC33.81■■■■□ 3
PCDH11XQ9BZA7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC33.81■■■■□ 3
PCDH11XQ9BZA7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC33.8■■■■□ 3
PCDH11XQ9BZA7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
PCDH11XQ9BZA7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
PCDH11XQ9BZA7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
PCDH11XQ9BZA7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC33.78■■■■□ 3
PCDH11XQ9BZA7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC33.78■■■■□ 3
PCDH11XQ9BZA7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
PCDH11XQ9BZA7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC33.78■■■■□ 3
PCDH11XQ9BZA7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC33.76■■■■□ 3
PCDH11XQ9BZA7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
PCDH11XQ9BZA7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC33.75■■■□□ 2.99
PCDH11XQ9BZA7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC33.74■■■□□ 2.99
PCDH11XQ9BZA7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
PCDH11XQ9BZA7 MIR219A2-201ENST00000608502 1504 ntBASIC33.71■■■□□ 2.99
PCDH11XQ9BZA7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
PCDH11XQ9BZA7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
PCDH11XQ9BZA7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
PCDH11XQ9BZA7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.98
PCDH11XQ9BZA7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC33.69■■■□□ 2.98
PCDH11XQ9BZA7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
PCDH11XQ9BZA7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
PCDH11XQ9BZA7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC33.69■■■□□ 2.98
PCDH11XQ9BZA7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
PCDH11XQ9BZA7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC33.69■■■□□ 2.98
PCDH11XQ9BZA7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC33.68■■■□□ 2.98
PCDH11XQ9BZA7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC33.68■■■□□ 2.98
PCDH11XQ9BZA7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC33.68■■■□□ 2.98
PCDH11XQ9BZA7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
PCDH11XQ9BZA7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC33.68■■■□□ 2.98
PCDH11XQ9BZA7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
PCDH11XQ9BZA7 U85056.1-201ENST00000616429 682 ntBASIC33.67■■■□□ 2.98
PCDH11XQ9BZA7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC33.67■■■□□ 2.98
PCDH11XQ9BZA7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC33.67■■■□□ 2.98
PCDH11XQ9BZA7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
PCDH11XQ9BZA7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC33.66■■■□□ 2.98
PCDH11XQ9BZA7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC33.66■■■□□ 2.98
PCDH11XQ9BZA7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC33.65■■■□□ 2.98
PCDH11XQ9BZA7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC33.65■■■□□ 2.98
PCDH11XQ9BZA7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
PCDH11XQ9BZA7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC33.64■■■□□ 2.98
PCDH11XQ9BZA7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
PCDH11XQ9BZA7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
PCDH11XQ9BZA7 AC092296.2-201ENST00000589470 999 ntBASIC33.64■■■□□ 2.98
PCDH11XQ9BZA7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC33.64■■■□□ 2.98
PCDH11XQ9BZA7 AC018358.1-201ENST00000631079 1402 ntBASIC33.64■■■□□ 2.98
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms