Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GAFA1Q96PS6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.45■■□□□ 1.02
GAFA1Q96PS6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GAFA1Q96PS6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.44■■□□□ 1.02
GAFA1Q96PS6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GAFA1Q96PS6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
GAFA1Q96PS6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GAFA1Q96PS6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
GAFA1Q96PS6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.43■■□□□ 1.02
GAFA1Q96PS6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.43■■□□□ 1.02
GAFA1Q96PS6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
GAFA1Q96PS6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
GAFA1Q96PS6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GAFA1Q96PS6 ABHD17AP4-201ENST00000411545 909 ntBASIC21.42■■□□□ 1.02
GAFA1Q96PS6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.42■■□□□ 1.02
GAFA1Q96PS6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.42■■□□□ 1.02
GAFA1Q96PS6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GAFA1Q96PS6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.41■■□□□ 1.02
GAFA1Q96PS6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.41■■□□□ 1.02
GAFA1Q96PS6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GAFA1Q96PS6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GAFA1Q96PS6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GAFA1Q96PS6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GAFA1Q96PS6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GAFA1Q96PS6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.4■■□□□ 1.02
GAFA1Q96PS6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.4■■□□□ 1.02
GAFA1Q96PS6 ZNRF2P2-203ENST00000454624 420 ntBASIC21.4■■□□□ 1.02
GAFA1Q96PS6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.4■■□□□ 1.02
GAFA1Q96PS6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
GAFA1Q96PS6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
GAFA1Q96PS6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.39■■□□□ 1.01
GAFA1Q96PS6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
GAFA1Q96PS6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GAFA1Q96PS6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.39■■□□□ 1.01
GAFA1Q96PS6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.38■■□□□ 1.01
GAFA1Q96PS6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
GAFA1Q96PS6 AC100797.4-201ENST00000631653 1827 ntBASIC21.38■■□□□ 1.01
GAFA1Q96PS6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
GAFA1Q96PS6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GAFA1Q96PS6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
GAFA1Q96PS6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GAFA1Q96PS6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GAFA1Q96PS6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.36■■□□□ 1.01
GAFA1Q96PS6 LINC01971-201ENST00000617888 1048 ntBASIC21.36■■□□□ 1.01
GAFA1Q96PS6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
GAFA1Q96PS6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GAFA1Q96PS6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.36■■□□□ 1.01
GAFA1Q96PS6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GAFA1Q96PS6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.35■■□□□ 1.01
GAFA1Q96PS6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GAFA1Q96PS6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
GAFA1Q96PS6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.34■■□□□ 1.01
GAFA1Q96PS6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.34■■□□□ 1.01
GAFA1Q96PS6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GAFA1Q96PS6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GAFA1Q96PS6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
GAFA1Q96PS6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
GAFA1Q96PS6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
GAFA1Q96PS6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
GAFA1Q96PS6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.32■■□□□ 1
GAFA1Q96PS6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GAFA1Q96PS6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GAFA1Q96PS6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
GAFA1Q96PS6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
GAFA1Q96PS6 DRD5P2-201ENST00000421395 2012 ntBASIC21.3■■□□□ 1
GAFA1Q96PS6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.3■■□□□ 1
GAFA1Q96PS6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GAFA1Q96PS6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.3■■□□□ 1
GAFA1Q96PS6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.3■■□□□ 1
GAFA1Q96PS6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.3■■□□□ 1
GAFA1Q96PS6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GAFA1Q96PS6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GAFA1Q96PS6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.29■■□□□ 1
GAFA1Q96PS6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
GAFA1Q96PS6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
GAFA1Q96PS6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GAFA1Q96PS6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.28■■□□□ 1
GAFA1Q96PS6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GAFA1Q96PS6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.28■■□□□ 1
GAFA1Q96PS6 DUX4L11-201ENST00000611504 1267 ntBASIC21.28■■□□□ 1
GAFA1Q96PS6 DUX4L12-201ENST00000614593 1267 ntBASIC21.28■■□□□ 1
GAFA1Q96PS6 DUX4L14-201ENST00000621227 1267 ntBASIC21.28■■□□□ 1
GAFA1Q96PS6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.28■■□□□ 1
GAFA1Q96PS6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GAFA1Q96PS6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
GAFA1Q96PS6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GAFA1Q96PS6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.26■□□□□ 0.99
GAFA1Q96PS6 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.26■□□□□ 0.99
GAFA1Q96PS6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GAFA1Q96PS6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GAFA1Q96PS6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.25■□□□□ 0.99
GAFA1Q96PS6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GAFA1Q96PS6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GAFA1Q96PS6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GAFA1Q96PS6 DUX4L13-201ENST00000554103 1267 ntBASIC21.24■□□□□ 0.99
GAFA1Q96PS6 DUX4L15-201ENST00000611059 1267 ntBASIC21.24■□□□□ 0.99
GAFA1Q96PS6 MIR7108-201ENST00000614319 87 ntBASIC21.24■□□□□ 0.99
GAFA1Q96PS6 DUX4L23-201ENST00000615195 1269 ntBASIC21.24■□□□□ 0.99
GAFA1Q96PS6 DUX4L24-201ENST00000617576 1269 ntBASIC21.24■□□□□ 0.99
GAFA1Q96PS6 DUX4L22-201ENST00000618238 1269 ntBASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms