Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.18■□□□□ 0.66
AP1S3Q96PC3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
AP1S3Q96PC3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP1S3Q96PC3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.17■□□□□ 0.66
AP1S3Q96PC3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AP1S3Q96PC3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP1S3Q96PC3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP1S3Q96PC3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
AP1S3Q96PC3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP1S3Q96PC3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.16■□□□□ 0.66
AP1S3Q96PC3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP1S3Q96PC3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.15■□□□□ 0.66
AP1S3Q96PC3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
AP1S3Q96PC3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP1S3Q96PC3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
AP1S3Q96PC3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
AP1S3Q96PC3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AP1S3Q96PC3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP1S3Q96PC3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP1S3Q96PC3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP1S3Q96PC3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S3Q96PC3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S3Q96PC3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S3Q96PC3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S3Q96PC3 AL031258.1-201ENST00000623562 325 ntBASIC19.12■□□□□ 0.65
AP1S3Q96PC3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.11■□□□□ 0.65
AP1S3Q96PC3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
AP1S3Q96PC3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.11■□□□□ 0.65
AP1S3Q96PC3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.11■□□□□ 0.65
AP1S3Q96PC3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP1S3Q96PC3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP1S3Q96PC3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP1S3Q96PC3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP1S3Q96PC3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
AP1S3Q96PC3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP1S3Q96PC3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AP1S3Q96PC3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AP1S3Q96PC3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
AP1S3Q96PC3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP1S3Q96PC3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP1S3Q96PC3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP1S3Q96PC3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP1S3Q96PC3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.08■□□□□ 0.64
AP1S3Q96PC3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
AP1S3Q96PC3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.07■□□□□ 0.64
AP1S3Q96PC3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
AP1S3Q96PC3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP1S3Q96PC3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
AP1S3Q96PC3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP1S3Q96PC3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP1S3Q96PC3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
AP1S3Q96PC3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP1S3Q96PC3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP1S3Q96PC3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP1S3Q96PC3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP1S3Q96PC3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP1S3Q96PC3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
AP1S3Q96PC3 AL139393.2-201ENST00000608721 2025 ntBASIC19.03■□□□□ 0.64
AP1S3Q96PC3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S3Q96PC3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S3Q96PC3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S3Q96PC3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S3Q96PC3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S3Q96PC3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.03■□□□□ 0.64
AP1S3Q96PC3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S3Q96PC3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
AP1S3Q96PC3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
AP1S3Q96PC3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
AP1S3Q96PC3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
AP1S3Q96PC3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
AP1S3Q96PC3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S3Q96PC3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.01■□□□□ 0.63
AP1S3Q96PC3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.01■□□□□ 0.63
AP1S3Q96PC3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S3Q96PC3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP1S3Q96PC3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP1S3Q96PC3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AP1S3Q96PC3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AP1S3Q96PC3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.99■□□□□ 0.63
AP1S3Q96PC3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
AP1S3Q96PC3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S3Q96PC3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
AP1S3Q96PC3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.98■□□□□ 0.63
AP1S3Q96PC3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
AP1S3Q96PC3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S3Q96PC3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S3Q96PC3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP1S3Q96PC3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP1S3Q96PC3 AP002365.1-201ENST00000603448 772 ntBASIC18.97■□□□□ 0.63
AP1S3Q96PC3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP1S3Q96PC3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.97■□□□□ 0.63
AP1S3Q96PC3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AP1S3Q96PC3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP1S3Q96PC3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP1S3Q96PC3 WASH5P-204ENST00000632292 975 ntBASIC18.96■□□□□ 0.63
AP1S3Q96PC3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP1S3Q96PC3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
AP1S3Q96PC3 DRD5P2-201ENST00000421395 2012 ntBASIC18.96■□□□□ 0.63
AP1S3Q96PC3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP1S3Q96PC3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms