Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 AP004833.2-201ENST00000532228 1454 ntBASIC22■■□□□ 1.11
SMIM4Q8WVI0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
SMIM4Q8WVI0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMIM4Q8WVI0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM4Q8WVI0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM4Q8WVI0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM4Q8WVI0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.98■■□□□ 1.11
SMIM4Q8WVI0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM4Q8WVI0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM4Q8WVI0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM4Q8WVI0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM4Q8WVI0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM4Q8WVI0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.96■■□□□ 1.11
SMIM4Q8WVI0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM4Q8WVI0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM4Q8WVI0 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SMIM4Q8WVI0 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM4Q8WVI0 DYNLL1-208ENST00000550178 581 ntBASIC21.94■■□□□ 1.1
SMIM4Q8WVI0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM4Q8WVI0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM4Q8WVI0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.94■■□□□ 1.1
SMIM4Q8WVI0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.94■■□□□ 1.1
SMIM4Q8WVI0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.92■■□□□ 1.1
SMIM4Q8WVI0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.92■■□□□ 1.1
SMIM4Q8WVI0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM4Q8WVI0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SMIM4Q8WVI0 WASH5P-204ENST00000632292 975 ntBASIC21.92■■□□□ 1.1
SMIM4Q8WVI0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.92■■□□□ 1.1
SMIM4Q8WVI0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM4Q8WVI0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM4Q8WVI0 AC091060.1-201ENST00000623524 1766 ntBASIC21.92■■□□□ 1.1
SMIM4Q8WVI0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM4Q8WVI0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM4Q8WVI0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM4Q8WVI0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.9■■□□□ 1.1
SMIM4Q8WVI0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM4Q8WVI0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SMIM4Q8WVI0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMIM4Q8WVI0 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMIM4Q8WVI0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
SMIM4Q8WVI0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMIM4Q8WVI0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
SMIM4Q8WVI0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
SMIM4Q8WVI0 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM4Q8WVI0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.88■■□□□ 1.09
SMIM4Q8WVI0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SMIM4Q8WVI0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM4Q8WVI0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM4Q8WVI0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.87■■□□□ 1.09
SMIM4Q8WVI0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM4Q8WVI0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SMIM4Q8WVI0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM4Q8WVI0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM4Q8WVI0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM4Q8WVI0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SMIM4Q8WVI0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM4Q8WVI0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
SMIM4Q8WVI0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM4Q8WVI0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.86■■□□□ 1.09
SMIM4Q8WVI0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM4Q8WVI0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM4Q8WVI0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.85■■□□□ 1.09
SMIM4Q8WVI0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.85■■□□□ 1.09
SMIM4Q8WVI0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.84■■□□□ 1.09
SMIM4Q8WVI0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM4Q8WVI0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM4Q8WVI0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMIM4Q8WVI0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
SMIM4Q8WVI0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.83■■□□□ 1.09
SMIM4Q8WVI0 AC020928.2-201ENST00000588717 2197 ntBASIC21.83■■□□□ 1.09
SMIM4Q8WVI0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
SMIM4Q8WVI0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
SMIM4Q8WVI0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
SMIM4Q8WVI0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM4Q8WVI0 AL031258.1-201ENST00000623562 325 ntBASIC21.81■■□□□ 1.08
SMIM4Q8WVI0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM4Q8WVI0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.8■■□□□ 1.08
SMIM4Q8WVI0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM4Q8WVI0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.8■■□□□ 1.08
SMIM4Q8WVI0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
SMIM4Q8WVI0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM4Q8WVI0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM4Q8WVI0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SMIM4Q8WVI0 AC145676.1-201ENST00000514988 2004 ntBASIC21.79■■□□□ 1.08
SMIM4Q8WVI0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.78■■□□□ 1.08
SMIM4Q8WVI0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMIM4Q8WVI0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
SMIM4Q8WVI0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SMIM4Q8WVI0 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SMIM4Q8WVI0 ZNRF2P1-201ENST00000441407 443 ntBASIC21.77■■□□□ 1.08
SMIM4Q8WVI0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.77■■□□□ 1.08
SMIM4Q8WVI0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMIM4Q8WVI0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMIM4Q8WVI0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMIM4Q8WVI0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.76■■□□□ 1.07
SMIM4Q8WVI0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.76■■□□□ 1.07
SMIM4Q8WVI0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.76■■□□□ 1.07
SMIM4Q8WVI0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.76■■□□□ 1.07
SMIM4Q8WVI0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SMIM4Q8WVI0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 159.8 ms