Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALMS1Q8TCU4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALMS1Q8TCU4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC17.81■□□□□ 0.44
ALMS1Q8TCU4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.81■□□□□ 0.44
ALMS1Q8TCU4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.81■□□□□ 0.44
ALMS1Q8TCU4 AC092296.2-201ENST00000589470 999 ntBASIC17.8■□□□□ 0.44
ALMS1Q8TCU4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.8■□□□□ 0.44
ALMS1Q8TCU4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALMS1Q8TCU4 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ALMS1Q8TCU4 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ALMS1Q8TCU4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ALMS1Q8TCU4 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ALMS1Q8TCU4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALMS1Q8TCU4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALMS1Q8TCU4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALMS1Q8TCU4 AC148477.6-201ENST00000623746 465 ntBASIC17.78■□□□□ 0.44
ALMS1Q8TCU4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALMS1Q8TCU4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALMS1Q8TCU4 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC17.78■□□□□ 0.44
ALMS1Q8TCU4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALMS1Q8TCU4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALMS1Q8TCU4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ALMS1Q8TCU4 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALMS1Q8TCU4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALMS1Q8TCU4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ALMS1Q8TCU4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ALMS1Q8TCU4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.76■□□□□ 0.43
ALMS1Q8TCU4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ALMS1Q8TCU4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALMS1Q8TCU4 AC019069.1-201ENST00000610008 1333 ntBASIC17.75■□□□□ 0.43
ALMS1Q8TCU4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ALMS1Q8TCU4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALMS1Q8TCU4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ALMS1Q8TCU4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALMS1Q8TCU4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ALMS1Q8TCU4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALMS1Q8TCU4 AL157400.5-201ENST00000507624 621 ntBASIC17.74■□□□□ 0.43
ALMS1Q8TCU4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALMS1Q8TCU4 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ALMS1Q8TCU4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
ALMS1Q8TCU4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ALMS1Q8TCU4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
ALMS1Q8TCU4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ALMS1Q8TCU4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALMS1Q8TCU4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALMS1Q8TCU4 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALMS1Q8TCU4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALMS1Q8TCU4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.73■□□□□ 0.43
ALMS1Q8TCU4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ALMS1Q8TCU4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ALMS1Q8TCU4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALMS1Q8TCU4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
ALMS1Q8TCU4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ALMS1Q8TCU4 AC129492.7-201ENST00000622992 756 ntBASIC17.72■□□□□ 0.43
ALMS1Q8TCU4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ALMS1Q8TCU4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.72■□□□□ 0.43
ALMS1Q8TCU4 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ALMS1Q8TCU4 WHAMMP2-203ENST00000563942 1603 ntBASIC17.71■□□□□ 0.43
ALMS1Q8TCU4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC17.71■□□□□ 0.43
ALMS1Q8TCU4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
ALMS1Q8TCU4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
ALMS1Q8TCU4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALMS1Q8TCU4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALMS1Q8TCU4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
ALMS1Q8TCU4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
ALMS1Q8TCU4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC17.7■□□□□ 0.42
ALMS1Q8TCU4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.7■□□□□ 0.42
ALMS1Q8TCU4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALMS1Q8TCU4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ALMS1Q8TCU4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALMS1Q8TCU4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALMS1Q8TCU4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALMS1Q8TCU4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ALMS1Q8TCU4 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ALMS1Q8TCU4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.68■□□□□ 0.42
ALMS1Q8TCU4 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.68■□□□□ 0.42
ALMS1Q8TCU4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ALMS1Q8TCU4 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.68■□□□□ 0.42
ALMS1Q8TCU4 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALMS1Q8TCU4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALMS1Q8TCU4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALMS1Q8TCU4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.67■□□□□ 0.42
ALMS1Q8TCU4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALMS1Q8TCU4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALMS1Q8TCU4 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC17.67■□□□□ 0.42
ALMS1Q8TCU4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.67■□□□□ 0.42
ALMS1Q8TCU4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALMS1Q8TCU4 AC120057.4-201ENST00000624722 1615 ntBASIC17.66■□□□□ 0.42
ALMS1Q8TCU4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17.66■□□□□ 0.42
ALMS1Q8TCU4 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
ALMS1Q8TCU4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALMS1Q8TCU4 AL592293.1-201ENST00000502889 1188 ntBASIC17.66■□□□□ 0.42
ALMS1Q8TCU4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.66■□□□□ 0.42
ALMS1Q8TCU4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.66■□□□□ 0.42
ALMS1Q8TCU4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALMS1Q8TCU4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALMS1Q8TCU4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.65■□□□□ 0.42
ALMS1Q8TCU4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALMS1Q8TCU4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALMS1Q8TCU4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms