Protein–RNA interactions for Protein: Q8NHX4

SPATA3, Spermatogenesis-associated protein 3, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA3Q8NHX4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPATA3Q8NHX4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPATA3Q8NHX4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPATA3Q8NHX4 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPATA3Q8NHX4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPATA3Q8NHX4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.59■□□□□ 0.89
SPATA3Q8NHX4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPATA3Q8NHX4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPATA3Q8NHX4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.59■□□□□ 0.89
SPATA3Q8NHX4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.58■□□□□ 0.89
SPATA3Q8NHX4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPATA3Q8NHX4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SPATA3Q8NHX4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPATA3Q8NHX4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SPATA3Q8NHX4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPATA3Q8NHX4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.57■□□□□ 0.88
SPATA3Q8NHX4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPATA3Q8NHX4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPATA3Q8NHX4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPATA3Q8NHX4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.57■□□□□ 0.88
SPATA3Q8NHX4 AC060814.1-201ENST00000554326 538 ntBASIC20.57■□□□□ 0.88
SPATA3Q8NHX4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SPATA3Q8NHX4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SPATA3Q8NHX4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SPATA3Q8NHX4 AC009299.2-201ENST00000482477 511 ntBASIC20.56■□□□□ 0.88
SPATA3Q8NHX4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPATA3Q8NHX4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SPATA3Q8NHX4 GUSBP5-201ENST00000418136 578 ntBASIC20.54■□□□□ 0.88
SPATA3Q8NHX4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPATA3Q8NHX4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPATA3Q8NHX4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPATA3Q8NHX4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPATA3Q8NHX4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPATA3Q8NHX4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPATA3Q8NHX4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPATA3Q8NHX4 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPATA3Q8NHX4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SPATA3Q8NHX4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPATA3Q8NHX4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.52■□□□□ 0.87
SPATA3Q8NHX4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.51■□□□□ 0.87
SPATA3Q8NHX4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.51■□□□□ 0.87
SPATA3Q8NHX4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.51■□□□□ 0.87
SPATA3Q8NHX4 AC129492.7-201ENST00000622992 756 ntBASIC20.51■□□□□ 0.87
SPATA3Q8NHX4 DUX4L18-201ENST00000553347 1267 ntBASIC20.5■□□□□ 0.87
SPATA3Q8NHX4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
SPATA3Q8NHX4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPATA3Q8NHX4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.49■□□□□ 0.87
SPATA3Q8NHX4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.49■□□□□ 0.87
SPATA3Q8NHX4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SPATA3Q8NHX4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPATA3Q8NHX4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPATA3Q8NHX4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPATA3Q8NHX4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPATA3Q8NHX4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPATA3Q8NHX4 RP9P-202ENST00000450133 1212 ntBASIC20.48■□□□□ 0.87
SPATA3Q8NHX4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.48■□□□□ 0.87
SPATA3Q8NHX4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SPATA3Q8NHX4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.47■□□□□ 0.87
SPATA3Q8NHX4 ECEL1P2-201ENST00000461596 1295 ntBASIC20.47■□□□□ 0.87
SPATA3Q8NHX4 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.47■□□□□ 0.87
SPATA3Q8NHX4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPATA3Q8NHX4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPATA3Q8NHX4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.47■□□□□ 0.87
SPATA3Q8NHX4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPATA3Q8NHX4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.46■□□□□ 0.87
SPATA3Q8NHX4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPATA3Q8NHX4 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPATA3Q8NHX4 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SPATA3Q8NHX4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
SPATA3Q8NHX4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPATA3Q8NHX4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPATA3Q8NHX4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.45■□□□□ 0.86
SPATA3Q8NHX4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.45■□□□□ 0.86
SPATA3Q8NHX4 AC092296.2-201ENST00000589470 999 ntBASIC20.45■□□□□ 0.86
SPATA3Q8NHX4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.45■□□□□ 0.86
SPATA3Q8NHX4 AC008406.3-201ENST00000620001 1374 ntBASIC20.45■□□□□ 0.86
SPATA3Q8NHX4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SPATA3Q8NHX4 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPATA3Q8NHX4 AL356441.2-201ENST00000443009 864 ntBASIC20.44■□□□□ 0.86
SPATA3Q8NHX4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.44■□□□□ 0.86
SPATA3Q8NHX4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPATA3Q8NHX4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SPATA3Q8NHX4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPATA3Q8NHX4 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPATA3Q8NHX4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPATA3Q8NHX4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.42■□□□□ 0.86
SPATA3Q8NHX4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SPATA3Q8NHX4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPATA3Q8NHX4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.41■□□□□ 0.86
SPATA3Q8NHX4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPATA3Q8NHX4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPATA3Q8NHX4 AC074183.2-201ENST00000623112 922 ntBASIC20.41■□□□□ 0.86
SPATA3Q8NHX4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SPATA3Q8NHX4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPATA3Q8NHX4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.4■□□□□ 0.86
SPATA3Q8NHX4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.4■□□□□ 0.86
SPATA3Q8NHX4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.4■□□□□ 0.86
SPATA3Q8NHX4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SPATA3Q8NHX4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.4■□□□□ 0.86
SPATA3Q8NHX4 LINC00273-201ENST00000539813 1452 ntBASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms