Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
LSMEM1Q8N8F7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.35
LSMEM1Q8N8F7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.45■■□□□ 1.34
LSMEM1Q8N8F7 MIR6090-201ENST00000622481 60 ntBASIC23.45■■□□□ 1.34
LSMEM1Q8N8F7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
LSMEM1Q8N8F7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
LSMEM1Q8N8F7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.43■■□□□ 1.34
LSMEM1Q8N8F7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
LSMEM1Q8N8F7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
LSMEM1Q8N8F7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
LSMEM1Q8N8F7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
LSMEM1Q8N8F7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.42■■□□□ 1.34
LSMEM1Q8N8F7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
LSMEM1Q8N8F7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.42■■□□□ 1.34
LSMEM1Q8N8F7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.41■■□□□ 1.34
LSMEM1Q8N8F7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
LSMEM1Q8N8F7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
LSMEM1Q8N8F7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
LSMEM1Q8N8F7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
LSMEM1Q8N8F7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
LSMEM1Q8N8F7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
LSMEM1Q8N8F7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.4■■□□□ 1.34
LSMEM1Q8N8F7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
LSMEM1Q8N8F7 AC100797.4-201ENST00000631653 1827 ntBASIC23.4■■□□□ 1.34
LSMEM1Q8N8F7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
LSMEM1Q8N8F7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
LSMEM1Q8N8F7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
LSMEM1Q8N8F7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.39■■□□□ 1.33
LSMEM1Q8N8F7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
LSMEM1Q8N8F7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
LSMEM1Q8N8F7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
LSMEM1Q8N8F7 AC135983.2-203ENST00000454486 1613 ntBASIC23.37■■□□□ 1.33
LSMEM1Q8N8F7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LSMEM1Q8N8F7 AC087741.3-201ENST00000624270 1347 ntBASIC23.37■■□□□ 1.33
LSMEM1Q8N8F7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
LSMEM1Q8N8F7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LSMEM1Q8N8F7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LSMEM1Q8N8F7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
LSMEM1Q8N8F7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
LSMEM1Q8N8F7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
LSMEM1Q8N8F7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.36■■□□□ 1.33
LSMEM1Q8N8F7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LSMEM1Q8N8F7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
LSMEM1Q8N8F7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LSMEM1Q8N8F7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LSMEM1Q8N8F7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
LSMEM1Q8N8F7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.35■■□□□ 1.33
LSMEM1Q8N8F7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.35■■□□□ 1.33
LSMEM1Q8N8F7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
LSMEM1Q8N8F7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.34■■□□□ 1.33
LSMEM1Q8N8F7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
LSMEM1Q8N8F7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.34■■□□□ 1.33
LSMEM1Q8N8F7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LSMEM1Q8N8F7 AL162393.1-201ENST00000437852 946 ntBASIC23.34■■□□□ 1.33
LSMEM1Q8N8F7 LINC00273-201ENST00000539813 1452 ntBASIC23.34■■□□□ 1.33
LSMEM1Q8N8F7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
LSMEM1Q8N8F7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.33■■□□□ 1.32
LSMEM1Q8N8F7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
LSMEM1Q8N8F7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
LSMEM1Q8N8F7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
LSMEM1Q8N8F7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.32■■□□□ 1.32
LSMEM1Q8N8F7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LSMEM1Q8N8F7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LSMEM1Q8N8F7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.31■■□□□ 1.32
LSMEM1Q8N8F7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.31■■□□□ 1.32
LSMEM1Q8N8F7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LSMEM1Q8N8F7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LSMEM1Q8N8F7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LSMEM1Q8N8F7 BX255925.1-201ENST00000566954 1854 ntBASIC23.3■■□□□ 1.32
LSMEM1Q8N8F7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
LSMEM1Q8N8F7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
LSMEM1Q8N8F7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LSMEM1Q8N8F7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LSMEM1Q8N8F7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
LSMEM1Q8N8F7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.29■■□□□ 1.32
LSMEM1Q8N8F7 WHAMMP2-203ENST00000563942 1603 ntBASIC23.29■■□□□ 1.32
LSMEM1Q8N8F7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.28■■□□□ 1.32
LSMEM1Q8N8F7 AC044849.2-201ENST00000606596 710 ntBASIC23.28■■□□□ 1.32
LSMEM1Q8N8F7 AP002414.2-202ENST00000590929 1450 ntBASIC23.28■■□□□ 1.32
LSMEM1Q8N8F7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LSMEM1Q8N8F7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LSMEM1Q8N8F7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LSMEM1Q8N8F7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LSMEM1Q8N8F7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.26■■□□□ 1.31
LSMEM1Q8N8F7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
LSMEM1Q8N8F7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LSMEM1Q8N8F7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
LSMEM1Q8N8F7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
LSMEM1Q8N8F7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LSMEM1Q8N8F7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LSMEM1Q8N8F7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LSMEM1Q8N8F7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LSMEM1Q8N8F7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.24■■□□□ 1.31
LSMEM1Q8N8F7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
LSMEM1Q8N8F7 LINC01003-201ENST00000564834 1764 ntBASIC23.24■■□□□ 1.31
LSMEM1Q8N8F7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LSMEM1Q8N8F7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
LSMEM1Q8N8F7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
LSMEM1Q8N8F7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
LSMEM1Q8N8F7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms